RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
COPS7B-222ENST00000492423 AEBP2Q6ZN18 517 aaPredicted RBP33.74■■■□□ 2.99
COPS7B-222ENST00000492423 CHIC1Q5VXU3 224 aa31.67■■■□□ 2.66
COPS7B-222ENST00000492423 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
COPS7B-222ENST00000492423 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
COPS7B-222ENST00000492423 ABCC9O60706 1549 aa29.14■■■□□ 2.25
COPS7B-222ENST00000492423 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
COPS7B-222ENST00000492423 SENP3Q9H4L4 574 aaPredicted RBP28.84■■■□□ 2.21
COPS7B-222ENST00000492423 MYO15BQ96JP2 1530 aa28.65■■■□□ 2.18
COPS7B-222ENST00000492423 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
COPS7B-222ENST00000492423 NACADO15069 1562 aa28.57■■■□□ 2.16
COPS7B-222ENST00000492423 PHF23Q9BUL5 403 aaPredicted RBP28.41■■■□□ 2.14
COPS7B-222ENST00000492423 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
COPS7B-222ENST00000492423 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
COPS7B-222ENST00000492423 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
COPS7B-222ENST00000492423 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
COPS7B-222ENST00000492423 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
COPS7B-222ENST00000492423 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.96
COPS7B-222ENST00000492423 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
COPS7B-222ENST00000492423 BAZ1AQ9NRL2 1556 aaPredicted RBP26.94■■□□□ 1.9
COPS7B-222ENST00000492423 FOXD1Q16676 465 aa26.93■■□□□ 1.9
COPS7B-222ENST00000492423 SMARCA4P51532 1647 aa26.91■■□□□ 1.9
COPS7B-222ENST00000492423 MROH2BQ7Z745 1585 aa26.9■■□□□ 1.9
COPS7B-222ENST00000492423 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
COPS7B-222ENST00000492423 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
COPS7B-222ENST00000492423 EIF4G1Q04637 1599 aaKnown RBP26.75■■□□□ 1.87
COPS7B-222ENST00000492423 WIZO95785 1651 aa26.7■■□□□ 1.87
COPS7B-222ENST00000492423 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
COPS7B-222ENST00000492423 PEG3Q9GZU2 1588 aa26.62■■□□□ 1.85
COPS7B-222ENST00000492423 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
COPS7B-222ENST00000492423 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
COPS7B-222ENST00000492423 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
COPS7B-222ENST00000492423 TOP2AP11388 1531 aaKnown RBP26.42■■□□□ 1.82
COPS7B-222ENST00000492423 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
COPS7B-222ENST00000492423 NCAPD3P42695 1498 aa26.31■■□□□ 1.8
COPS7B-222ENST00000492423 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
COPS7B-222ENST00000492423 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
COPS7B-222ENST00000492423 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
COPS7B-222ENST00000492423 CFTRP13569 1480 aa25.63■■□□□ 1.69
COPS7B-222ENST00000492423 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
COPS7B-222ENST00000492423 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
COPS7B-222ENST00000492423 NESP48681 1621 aa25.5■■□□□ 1.67
COPS7B-222ENST00000492423 ABCC8Q09428 1581 aa25.44■■□□□ 1.66
COPS7B-222ENST00000492423 POTEDQ86YR6 584 aa25.39■■□□□ 1.66
COPS7B-222ENST00000492423 MSH5O43196 834 aa25.34■■□□□ 1.65
COPS7B-222ENST00000492423 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
COPS7B-222ENST00000492423 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
COPS7B-222ENST00000492423 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
COPS7B-222ENST00000492423 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
COPS7B-222ENST00000492423 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
COPS7B-222ENST00000492423 PDS5BQ9NTI5 1447 aa25.23■■□□□ 1.63
COPS7B-222ENST00000492423 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
COPS7B-222ENST00000492423 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
COPS7B-222ENST00000492423 CUX1P39880 1505 aa25.19■■□□□ 1.62
COPS7B-222ENST00000492423 PLPPR3Q6T4P5 718 aa25.14■■□□□ 1.62
COPS7B-222ENST00000492423 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
COPS7B-222ENST00000492423 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
COPS7B-222ENST00000492423 PIAS4Q8N2W9 510 aaPredicted RBP25.09■■□□□ 1.61
COPS7B-222ENST00000492423 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
COPS7B-222ENST00000492423 TOPBP1Q92547 1522 aa25.04■■□□□ 1.6
COPS7B-222ENST00000492423 MRC2Q9UBG0 1479 aa25.01■■□□□ 1.59
COPS7B-222ENST00000492423 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
COPS7B-222ENST00000492423 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
COPS7B-222ENST00000492423 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
COPS7B-222ENST00000492423 WDR62O43379 1518 aa24.94■■□□□ 1.58
COPS7B-222ENST00000492423 PPP6R1Q9UPN7 881 aa24.89■■□□□ 1.58
COPS7B-222ENST00000492423 POLA1P09884 1462 aaPredicted RBP24.88■■□□□ 1.57
COPS7B-222ENST00000492423 WDR97A6NE52 1622 aa24.84■■□□□ 1.57
COPS7B-222ENST00000492423 CUX2O14529 1486 aa24.82■■□□□ 1.56
COPS7B-222ENST00000492423 SOGA1O94964 1423 aa24.81■■□□□ 1.56
COPS7B-222ENST00000492423 ADRA2BP18089 450 aa24.8■■□□□ 1.56
COPS7B-222ENST00000492423 RUSC2Q8N2Y8 1516 aa24.77■■□□□ 1.56
COPS7B-222ENST00000492423 RAD54L2Q9Y4B4 1467 aa24.76■■□□□ 1.55
COPS7B-222ENST00000492423 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
COPS7B-222ENST00000492423 DNAJC5Q9H3Z4 198 aa24.74■■□□□ 1.55
COPS7B-222ENST00000492423 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
COPS7B-222ENST00000492423 EEA1Q15075 1411 aa24.72■■□□□ 1.55
COPS7B-222ENST00000492423 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.54
COPS7B-222ENST00000492423 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.53
COPS7B-222ENST00000492423 KIF27Q86VH2 1401 aa24.63■■□□□ 1.53
COPS7B-222ENST00000492423 IFT140Q96RY7 1462 aa24.62■■□□□ 1.53
COPS7B-222ENST00000492423 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
COPS7B-222ENST00000492423 KIF21BO75037 1637 aa24.52■■□□□ 1.52
COPS7B-222ENST00000492423 CSRNP3Q8WYN3 585 aa24.51■■□□□ 1.51
COPS7B-222ENST00000492423 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
COPS7B-222ENST00000492423 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
COPS7B-222ENST00000492423 TDRD9Q8NDG6 1382 aaKnown RBP24.48■■□□□ 1.51
COPS7B-222ENST00000492423 GAPVD1Q14C86 1478 aa24.47■■□□□ 1.51
COPS7B-222ENST00000492423 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.5
COPS7B-222ENST00000492423 CUL7Q14999 1698 aa24.43■■□□□ 1.5
COPS7B-222ENST00000492423 PRXQ9BXM0 1461 aa24.43■■□□□ 1.5
COPS7B-222ENST00000492423 IGF1RP08069 1367 aa24.42■■□□□ 1.5
COPS7B-222ENST00000492423 AQRO60306 1485 aaKnown RBP eCLIP24.42■■□□□ 1.5
COPS7B-222ENST00000492423 LOC105371045A0A1W2PR82 267 aa24.38■■□□□ 1.49
COPS7B-222ENST00000492423 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
COPS7B-222ENST00000492423 GRIN2BQ13224 1484 aa24.35■■□□□ 1.49
COPS7B-222ENST00000492423 RAPGEF2Q9Y4G8 1499 aa24.35■■□□□ 1.49
COPS7B-222ENST00000492423 ADAMTS12P58397 1594 aa24.33■■□□□ 1.49
COPS7B-222ENST00000492423 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
COPS7B-222ENST00000492423 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms