RNA–Protein interactions for RNA: ENST00000491907.5

CCNB3-207, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 310 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-207ENST00000491907 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.02
CCNB3-207ENST00000491907 ABCC9O60706 1549 aa27.11■■□□□ 1.93
CCNB3-207ENST00000491907 DNAJC5Q9H3Z4 198 aa27.1■■□□□ 1.93
CCNB3-207ENST00000491907 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
CCNB3-207ENST00000491907 TRIM41Q8WV44 630 aa24.93■■□□□ 1.58
CCNB3-207ENST00000491907 PABPN1Q86U42 306 aaKnown RBP eCLIP24.91■■□□□ 1.58
CCNB3-207ENST00000491907 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.54
CCNB3-207ENST00000491907 RB1CC1Q8TDY2 1594 aa24.63■■□□□ 1.53
CCNB3-207ENST00000491907 CCDC180Q9P1Z9 1646 aa24.63■■□□□ 1.53
CCNB3-207ENST00000491907 CC2D2AQ9P2K1 1620 aa24.34■■□□□ 1.49
CCNB3-207ENST00000491907 CUX2O14529 1486 aa24.26■■□□□ 1.47
CCNB3-207ENST00000491907 UNC13AQ9UPW8 1703 aa24.16■■□□□ 1.46
CCNB3-207ENST00000491907 BICRAQ9NZM4 1560 aa24.11■■□□□ 1.45
CCNB3-207ENST00000491907 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
CCNB3-207ENST00000491907 NACADO15069 1562 aa23.87■■□□□ 1.41
CCNB3-207ENST00000491907 ILDR1Q86SU0 546 aaPredicted RBP23.69■■□□□ 1.38
CCNB3-207ENST00000491907 EIF4G1Q04637 1599 aaKnown RBP23.66■■□□□ 1.38
CCNB3-207ENST00000491907 ERCC6Q03468 1493 aa23.51■■□□□ 1.35
CCNB3-207ENST00000491907 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
CCNB3-207ENST00000491907 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
CCNB3-207ENST00000491907 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
CCNB3-207ENST00000491907 THOC2Q8NI27 1593 aaKnown RBP22.81■■□□□ 1.24
CCNB3-207ENST00000491907 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
CCNB3-207ENST00000491907 RIMBP3CA6NJZ7 1639 aa22.8■■□□□ 1.24
CCNB3-207ENST00000491907 RIMBP3BA6NNM3 1639 aa22.8■■□□□ 1.24
CCNB3-207ENST00000491907 RIMBP3Q9UFD9 1639 aa22.8■■□□□ 1.24
CCNB3-207ENST00000491907 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
CCNB3-207ENST00000491907 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
CCNB3-207ENST00000491907 NESP48681 1621 aa22.63■■□□□ 1.21
CCNB3-207ENST00000491907 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
CCNB3-207ENST00000491907 SCRIBQ14160 1630 aa22.51■■□□□ 1.19
CCNB3-207ENST00000491907 CYB5RLQ6IPT4 315 aa22.49■■□□□ 1.19
CCNB3-207ENST00000491907 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
CCNB3-207ENST00000491907 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
CCNB3-207ENST00000491907 LMTK3Q96Q04 1460 aa22.22■■□□□ 1.15
CCNB3-207ENST00000491907 SOCS7O14512 581 aa22.21■■□□□ 1.15
CCNB3-207ENST00000491907 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.15
CCNB3-207ENST00000491907 NCAPD3P42695 1498 aa22.11■■□□□ 1.13
CCNB3-207ENST00000491907 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
CCNB3-207ENST00000491907 FBXO41Q8TF61 875 aa22.03■■□□□ 1.12
CCNB3-207ENST00000491907 ILDR2Q71H61 639 aa22.01■■□□□ 1.11
CCNB3-207ENST00000491907 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.11
CCNB3-207ENST00000491907 WDR62O43379 1518 aa21.92■■□□□ 1.1
CCNB3-207ENST00000491907 PDS5BQ9NTI5 1447 aa21.92■■□□□ 1.1
CCNB3-207ENST00000491907 KDM4FA0A1W2PPD8 638 aa21.91■■□□□ 1.1
CCNB3-207ENST00000491907 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
CCNB3-207ENST00000491907 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
CCNB3-207ENST00000491907 ATAD2BQ9ULI0 1458 aa21.72■■□□□ 1.07
CCNB3-207ENST00000491907 HMGXB3Q12766 1538 aa21.68■■□□□ 1.06
CCNB3-207ENST00000491907 DISP3Q9P2K9 1392 aa21.59■■□□□ 1.05
CCNB3-207ENST00000491907 HECW2Q9P2P5 1572 aa21.58■■□□□ 1.05
CCNB3-207ENST00000491907 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
CCNB3-207ENST00000491907 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
CCNB3-207ENST00000491907 BAZ1BQ9UIG0 1483 aaKnown RBP21.34■■□□□ 1.01
CCNB3-207ENST00000491907 CADPSQ9ULU8 1353 aa21.33■■□□□ 1
CCNB3-207ENST00000491907 SYNJ2O15056 1496 aa21.32■■□□□ 1
CCNB3-207ENST00000491907 ZCCHC6Q5VYS8 1495 aaKnown RBP21.31■■□□□ 1
CCNB3-207ENST00000491907 CEP164Q9UPV0 1460 aa21.31■■□□□ 1
CCNB3-207ENST00000491907 CHD1O14646 1710 aa21.29■■□□□ 1
CCNB3-207ENST00000491907 ZNF608Q9ULD9 1512 aaPredicted RBP21.28■■□□□ 1
CCNB3-207ENST00000491907 SMARCA4P51532 1647 aa21.27■■□□□ 1
CCNB3-207ENST00000491907 KIF13AQ9H1H9 1805 aa21.14■□□□□ 0.97
CCNB3-207ENST00000491907 URB2Q14146 1524 aaKnown RBP21.12■□□□□ 0.97
CCNB3-207ENST00000491907 FBLN2P98095 1184 aa21.11■□□□□ 0.97
CCNB3-207ENST00000491907 FANCD2Q9BXW9 1451 aa21.1■□□□□ 0.97
CCNB3-207ENST00000491907 ADGRL1O94910 1474 aa21.09■□□□□ 0.97
CCNB3-207ENST00000491907 SPATA31D1Q6ZQQ2 1576 aa21.06■□□□□ 0.96
CCNB3-207ENST00000491907 CLASP1Q7Z460 1538 aa20.98■□□□□ 0.95
CCNB3-207ENST00000491907 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
CCNB3-207ENST00000491907 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
CCNB3-207ENST00000491907 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
CCNB3-207ENST00000491907 KDM6BO15054 1643 aa20.96■□□□□ 0.95
CCNB3-207ENST00000491907 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
CCNB3-207ENST00000491907 AQRO60306 1485 aaKnown RBP eCLIP20.77■□□□□ 0.92
CCNB3-207ENST00000491907 FAM69CQ0P6D2 419 aa20.77■□□□□ 0.92
CCNB3-207ENST00000491907 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
CCNB3-207ENST00000491907 CERKQ8TCT0 537 aa20.65■□□□□ 0.9
CCNB3-207ENST00000491907 ABCC10Q5T3U5 1492 aa20.64■□□□□ 0.89
CCNB3-207ENST00000491907 CFTRP13569 1480 aa20.58■□□□□ 0.89
CCNB3-207ENST00000491907 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
CCNB3-207ENST00000491907 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
CCNB3-207ENST00000491907 DIP2BQ9P265 1576 aa20.51■□□□□ 0.87
CCNB3-207ENST00000491907 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
CCNB3-207ENST00000491907 SNAPC4Q5SXM2 1469 aa20.44■□□□□ 0.86
CCNB3-207ENST00000491907 TARBP1Q13395 1621 aaKnown RBP20.44■□□□□ 0.86
CCNB3-207ENST00000491907 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
CCNB3-207ENST00000491907 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
CCNB3-207ENST00000491907 MAPKBP1O60336 1514 aa20.29■□□□□ 0.84
CCNB3-207ENST00000491907 TDRD9Q8NDG6 1382 aaKnown RBP20.26■□□□□ 0.83
CCNB3-207ENST00000491907 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
CCNB3-207ENST00000491907 COL17A1Q9UMD9 1497 aaPredicted RBP20.21■□□□□ 0.83
CCNB3-207ENST00000491907 PCF11O94913 1555 aaKnown RBP20.2■□□□□ 0.82
CCNB3-207ENST00000491907 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
CCNB3-207ENST00000491907 NPM1P06748 294 aaKnown RBP eCLIP20.18■□□□□ 0.82
CCNB3-207ENST00000491907 ABCC8Q09428 1581 aa20.13■□□□□ 0.81
CCNB3-207ENST00000491907 PRDM2Q13029 1718 aa20.12■□□□□ 0.81
CCNB3-207ENST00000491907 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
CCNB3-207ENST00000491907 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
CCNB3-207ENST00000491907 PPRC1Q5VV67 1664 aaKnown RBP20.1■□□□□ 0.81
CCNB3-207ENST00000491907 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms