RNA–Protein interactions for RNA: ENST00000491617.5

COMMD2-207, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-207ENST00000491617 AEBP2Q6ZN18 517 aaPredicted RBP36.27■■■■□ 3.4
COMMD2-207ENST00000491617 CHIC1Q5VXU3 224 aa33.92■■■■□ 3.02
COMMD2-207ENST00000491617 NISCHQ9Y2I1 1504 aa31.45■■■□□ 2.63
COMMD2-207ENST00000491617 SENP3Q9H4L4 574 aaPredicted RBP31.01■■■□□ 2.55
COMMD2-207ENST00000491617 PHF23Q9BUL5 403 aaPredicted RBP30.54■■■□□ 2.48
COMMD2-207ENST00000491617 FOXD1Q16676 465 aa28.98■■■□□ 2.23
COMMD2-207ENST00000491617 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
COMMD2-207ENST00000491617 POTEDQ86YR6 584 aa27.58■■■□□ 2.01
COMMD2-207ENST00000491617 ABCC9O60706 1549 aa27.49■■□□□ 1.99
COMMD2-207ENST00000491617 MSH5O43196 834 aa27.32■■□□□ 1.96
COMMD2-207ENST00000491617 PIAS4Q8N2W9 510 aaPredicted RBP26.93■■□□□ 1.9
COMMD2-207ENST00000491617 PLPPR3Q6T4P5 718 aa26.84■■□□□ 1.89
COMMD2-207ENST00000491617 PPP6R1Q9UPN7 881 aa26.68■■□□□ 1.86
COMMD2-207ENST00000491617 ADRA2BP18089 450 aa26.56■■□□□ 1.84
COMMD2-207ENST00000491617 DCAF8L2P0C7V8 631 aa26.39■■□□□ 1.82
COMMD2-207ENST00000491617 RB1CC1Q8TDY2 1594 aa26.38■■□□□ 1.81
COMMD2-207ENST00000491617 NACADO15069 1562 aa26.35■■□□□ 1.81
COMMD2-207ENST00000491617 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
COMMD2-207ENST00000491617 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
COMMD2-207ENST00000491617 DCAF1Q9Y4B6 1507 aa26.03■■□□□ 1.76
COMMD2-207ENST00000491617 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
COMMD2-207ENST00000491617 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
COMMD2-207ENST00000491617 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
COMMD2-207ENST00000491617 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
COMMD2-207ENST00000491617 DNAJC5BQ9UF47 199 aa25.39■■□□□ 1.66
COMMD2-207ENST00000491617 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
COMMD2-207ENST00000491617 EIF4G1Q04637 1599 aaKnown RBP24.92■■□□□ 1.58
COMMD2-207ENST00000491617 CC2D2AQ9P2K1 1620 aa24.82■■□□□ 1.56
COMMD2-207ENST00000491617 CECR2Q9BXF3 1484 aa24.73■■□□□ 1.55
COMMD2-207ENST00000491617 MAPK8IP2Q13387 824 aaPredicted RBP24.56■■□□□ 1.52
COMMD2-207ENST00000491617 DMRT2Q9Y5R5 561 aa24.52■■□□□ 1.52
COMMD2-207ENST00000491617 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
COMMD2-207ENST00000491617 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
COMMD2-207ENST00000491617 NCAPD3P42695 1498 aa24.37■■□□□ 1.49
COMMD2-207ENST00000491617 ATAD2BQ9ULI0 1458 aa24.34■■□□□ 1.49
COMMD2-207ENST00000491617 SCAF1Q9H7N4 1312 aaKnown RBP24.3■■□□□ 1.48
COMMD2-207ENST00000491617 SMARCA2P51531 1590 aa24.28■■□□□ 1.48
COMMD2-207ENST00000491617 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
COMMD2-207ENST00000491617 PEG3Q9GZU2 1588 aa24.17■■□□□ 1.46
COMMD2-207ENST00000491617 HMGXB3Q12766 1538 aa24.17■■□□□ 1.46
COMMD2-207ENST00000491617 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
COMMD2-207ENST00000491617 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
COMMD2-207ENST00000491617 WIZO95785 1651 aa23.9■■□□□ 1.42
COMMD2-207ENST00000491617 CACNB1Q02641 598 aaPredicted RBP23.77■■□□□ 1.4
COMMD2-207ENST00000491617 NESP48681 1621 aa23.74■■□□□ 1.39
COMMD2-207ENST00000491617 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
COMMD2-207ENST00000491617 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
COMMD2-207ENST00000491617 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
COMMD2-207ENST00000491617 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
COMMD2-207ENST00000491617 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
COMMD2-207ENST00000491617 DCAF8L1A6NGE4 600 aa23.51■■□□□ 1.35
COMMD2-207ENST00000491617 CUX2O14529 1486 aa23.49■■□□□ 1.35
COMMD2-207ENST00000491617 PPP4R3CPQ6ZMV5 832 aa23.47■■□□□ 1.35
COMMD2-207ENST00000491617 CFTRP13569 1480 aa23.47■■□□□ 1.35
COMMD2-207ENST00000491617 CCDC88BA6NC98 1476 aa23.45■■□□□ 1.34
COMMD2-207ENST00000491617 HOXD11P31277 338 aaPredicted RBP23.41■■□□□ 1.34
COMMD2-207ENST00000491617 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
COMMD2-207ENST00000491617 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
COMMD2-207ENST00000491617 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
COMMD2-207ENST00000491617 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
COMMD2-207ENST00000491617 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
COMMD2-207ENST00000491617 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
COMMD2-207ENST00000491617 RNF39Q9H2S5 420 aa23.27■■□□□ 1.32
COMMD2-207ENST00000491617 WDR62O43379 1518 aa23.21■■□□□ 1.31
COMMD2-207ENST00000491617 CNKSR2Q8WXI2 1034 aa23.14■■□□□ 1.29
COMMD2-207ENST00000491617 URB2Q14146 1524 aaKnown RBP23.1■■□□□ 1.29
COMMD2-207ENST00000491617 PRDM2Q13029 1718 aa23.08■■□□□ 1.29
COMMD2-207ENST00000491617 RNF216Q9NWF9 866 aaPredicted RBP23.08■■□□□ 1.29
COMMD2-207ENST00000491617 ABCC8Q09428 1581 aa22.98■■□□□ 1.27
COMMD2-207ENST00000491617 DNAJC5Q9H3Z4 198 aa22.96■■□□□ 1.27
COMMD2-207ENST00000491617 TOPBP1Q92547 1522 aa22.95■■□□□ 1.26
COMMD2-207ENST00000491617 C1QBPQ07021 282 aaKnown RBP22.89■■□□□ 1.25
COMMD2-207ENST00000491617 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
COMMD2-207ENST00000491617 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
COMMD2-207ENST00000491617 POLA1P09884 1462 aaPredicted RBP22.74■■□□□ 1.23
COMMD2-207ENST00000491617 CUX1P39880 1505 aa22.73■■□□□ 1.23
COMMD2-207ENST00000491617 ZNF608Q9ULD9 1512 aaPredicted RBP22.73■■□□□ 1.23
COMMD2-207ENST00000491617 SOGA1O94964 1423 aa22.7■■□□□ 1.22
COMMD2-207ENST00000491617 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
COMMD2-207ENST00000491617 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
COMMD2-207ENST00000491617 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
COMMD2-207ENST00000491617 AQRO60306 1485 aaKnown RBP eCLIP22.62■■□□□ 1.21
COMMD2-207ENST00000491617 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
COMMD2-207ENST00000491617 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
COMMD2-207ENST00000491617 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
COMMD2-207ENST00000491617 EIF4G3O43432 1585 aaKnown RBP22.58■■□□□ 1.2
COMMD2-207ENST00000491617 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
COMMD2-207ENST00000491617 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
COMMD2-207ENST00000491617 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
COMMD2-207ENST00000491617 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
COMMD2-207ENST00000491617 BIVM-ERCC5R4GMW8 1640 aa22.45■■□□□ 1.18
COMMD2-207ENST00000491617 GRIN2BQ13224 1484 aa22.42■■□□□ 1.18
COMMD2-207ENST00000491617 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
COMMD2-207ENST00000491617 FBLN2P98095 1184 aa22.4■■□□□ 1.18
COMMD2-207ENST00000491617 NCBP3Q53F19 620 aaKnown RBP22.4■■□□□ 1.18
COMMD2-207ENST00000491617 SNAPC4Q5SXM2 1469 aa22.38■■□□□ 1.17
COMMD2-207ENST00000491617 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
COMMD2-207ENST00000491617 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
COMMD2-207ENST00000491617 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
COMMD2-207ENST00000491617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms