RNA–Protein interactions for RNA: ENST00000490816.1

RIC1-205, Transcript of RIC1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 4

Gene RIC1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIC1-205ENST00000490816 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
RIC1-205ENST00000490816 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.56
RIC1-205ENST00000490816 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
RIC1-205ENST00000490816 PHF23Q9BUL5 403 aaPredicted RBP16.27■□□□□ 0.2
RIC1-205ENST00000490816 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
RIC1-205ENST00000490816 CCDC180Q9P1Z9 1646 aa15.82■□□□□ 0.12
RIC1-205ENST00000490816 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
RIC1-205ENST00000490816 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
RIC1-205ENST00000490816 DCAF1Q9Y4B6 1507 aa14.96□□□□□ -0.02
RIC1-205ENST00000490816 FOXD1Q16676 465 aa14.94□□□□□ -0.02
RIC1-205ENST00000490816 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
RIC1-205ENST00000490816 ABCC9O60706 1549 aa14.7□□□□□ -0.06
RIC1-205ENST00000490816 NACADO15069 1562 aa14.68□□□□□ -0.06
RIC1-205ENST00000490816 DCAF8L2P0C7V8 631 aa14.6□□□□□ -0.07
RIC1-205ENST00000490816 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
RIC1-205ENST00000490816 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
RIC1-205ENST00000490816 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
RIC1-205ENST00000490816 PPP6R1Q9UPN7 881 aa14.34□□□□□ -0.11
RIC1-205ENST00000490816 ADRA2BP18089 450 aa14.27□□□□□ -0.13
RIC1-205ENST00000490816 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
RIC1-205ENST00000490816 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
RIC1-205ENST00000490816 BICRAQ9NZM4 1560 aa13.97□□□□□ -0.17
RIC1-205ENST00000490816 BAZ1AQ9NRL2 1556 aaPredicted RBP13.92□□□□□ -0.18
RIC1-205ENST00000490816 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
RIC1-205ENST00000490816 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
RIC1-205ENST00000490816 MSH5O43196 834 aa13.82□□□□□ -0.2
RIC1-205ENST00000490816 SMARCA4P51532 1647 aa13.82□□□□□ -0.2
RIC1-205ENST00000490816 CECR2Q9BXF3 1484 aa13.79□□□□□ -0.2
RIC1-205ENST00000490816 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
RIC1-205ENST00000490816 PABPN1Q86U42 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
RIC1-205ENST00000490816 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.22
RIC1-205ENST00000490816 WIZO95785 1651 aa13.68□□□□□ -0.22
RIC1-205ENST00000490816 SMARCA2P51531 1590 aa13.66□□□□□ -0.22
RIC1-205ENST00000490816 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
RIC1-205ENST00000490816 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
RIC1-205ENST00000490816 ATAD2BQ9ULI0 1458 aa13.54□□□□□ -0.24
RIC1-205ENST00000490816 HMGXB3Q12766 1538 aa13.54□□□□□ -0.24
RIC1-205ENST00000490816 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
RIC1-205ENST00000490816 NCAPD3P42695 1498 aa13.47□□□□□ -0.25
RIC1-205ENST00000490816 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
RIC1-205ENST00000490816 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
RIC1-205ENST00000490816 PRDM2Q13029 1718 aa13.26□□□□□ -0.29
RIC1-205ENST00000490816 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
RIC1-205ENST00000490816 CFTRP13569 1480 aa13.15□□□□□ -0.3
RIC1-205ENST00000490816 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
RIC1-205ENST00000490816 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
RIC1-205ENST00000490816 LAMC3Q9Y6N6 1575 aa13.1□□□□□ -0.31
RIC1-205ENST00000490816 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.31
RIC1-205ENST00000490816 WRNQ14191 1432 aaPredicted RBP eCLIP13.07□□□□□ -0.32
RIC1-205ENST00000490816 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
RIC1-205ENST00000490816 BIVM-ERCC5R4GMW8 1640 aa13.05□□□□□ -0.32
RIC1-205ENST00000490816 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
RIC1-205ENST00000490816 EEA1Q15075 1411 aa13.02□□□□□ -0.33
RIC1-205ENST00000490816 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
RIC1-205ENST00000490816 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.33
RIC1-205ENST00000490816 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.34
RIC1-205ENST00000490816 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
RIC1-205ENST00000490816 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
RIC1-205ENST00000490816 CUX1P39880 1505 aa12.91□□□□□ -0.34
RIC1-205ENST00000490816 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.34
RIC1-205ENST00000490816 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
RIC1-205ENST00000490816 NESP48681 1621 aa12.86□□□□□ -0.35
RIC1-205ENST00000490816 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
RIC1-205ENST00000490816 KIF21AQ7Z4S6 1674 aa12.84□□□□□ -0.35
RIC1-205ENST00000490816 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
RIC1-205ENST00000490816 TOPBP1Q92547 1522 aa12.81□□□□□ -0.36
RIC1-205ENST00000490816 KIF21BO75037 1637 aa12.8□□□□□ -0.36
RIC1-205ENST00000490816 KCNA4P22459 653 aa12.8□□□□□ -0.36
RIC1-205ENST00000490816 KIF27Q86VH2 1401 aa12.79□□□□□ -0.36
RIC1-205ENST00000490816 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
RIC1-205ENST00000490816 SOGA1O94964 1423 aa12.78□□□□□ -0.36
RIC1-205ENST00000490816 DNAJC5BQ9UF47 199 aa12.77□□□□□ -0.37
RIC1-205ENST00000490816 MRC2Q9UBG0 1479 aa12.77□□□□□ -0.37
RIC1-205ENST00000490816 GOLGA3Q08378 1498 aa12.76□□□□□ -0.37
RIC1-205ENST00000490816 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
RIC1-205ENST00000490816 URB2Q14146 1524 aaKnown RBP12.74□□□□□ -0.37
RIC1-205ENST00000490816 ERICH3Q5RHP9 1530 aa12.74□□□□□ -0.37
RIC1-205ENST00000490816 FAM9AQ8IZU1 332 aaPredicted RBP12.74□□□□□ -0.37
RIC1-205ENST00000490816 WDR97A6NE52 1622 aa12.73□□□□□ -0.37
RIC1-205ENST00000490816 ABCA10Q8WWZ4 1543 aa12.73□□□□□ -0.37
RIC1-205ENST00000490816 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
RIC1-205ENST00000490816 WDR62O43379 1518 aa12.72□□□□□ -0.37
RIC1-205ENST00000490816 ERCC6Q03468 1493 aa12.71□□□□□ -0.38
RIC1-205ENST00000490816 CUX2O14529 1486 aa12.7□□□□□ -0.38
RIC1-205ENST00000490816 RUSC2Q8N2Y8 1516 aa12.69□□□□□ -0.38
RIC1-205ENST00000490816 CUL7Q14999 1698 aa12.68□□□□□ -0.38
RIC1-205ENST00000490816 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
RIC1-205ENST00000490816 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
RIC1-205ENST00000490816 LOC105371045A0A1W2PR82 267 aa12.65□□□□□ -0.38
RIC1-205ENST00000490816 RNF216Q9NWF9 866 aaPredicted RBP12.65□□□□□ -0.38
RIC1-205ENST00000490816 PRXQ9BXM0 1461 aa12.65□□□□□ -0.38
RIC1-205ENST00000490816 ABCA5Q8WWZ7 1642 aa12.64□□□□□ -0.39
RIC1-205ENST00000490816 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
RIC1-205ENST00000490816 HOXD11P31277 338 aaPredicted RBP12.64□□□□□ -0.39
RIC1-205ENST00000490816 TARBP1Q13395 1621 aaKnown RBP12.63□□□□□ -0.39
RIC1-205ENST00000490816 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
RIC1-205ENST00000490816 POTEDQ86YR6 584 aa12.62□□□□□ -0.39
RIC1-205ENST00000490816 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
RIC1-205ENST00000490816 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
RIC1-205ENST00000490816 PBRM1Q86U86 1689 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms