RNA–Protein interactions for RNA: ENST00000489914.1

PCGF1-206, Transcript of polycomb group ring finger 1, humanhuman

TSL 1 (best)

Gene PCGF1, Length 433 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1-206ENST00000489914 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
PCGF1-206ENST00000489914 NISCHQ9Y2I1 1504 aa16.67■□□□□ 0.26
PCGF1-206ENST00000489914 CHIC1Q5VXU3 224 aa16.38■□□□□ 0.21
PCGF1-206ENST00000489914 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
PCGF1-206ENST00000489914 ABCC9O60706 1549 aa15.78■□□□□ 0.12
PCGF1-206ENST00000489914 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
PCGF1-206ENST00000489914 SENP3Q9H4L4 574 aaPredicted RBP15.22■□□□□ 0.03
PCGF1-206ENST00000489914 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
PCGF1-206ENST00000489914 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
PCGF1-206ENST00000489914 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
PCGF1-206ENST00000489914 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
PCGF1-206ENST00000489914 DCAF8L2P0C7V8 631 aa14.55□□□□□ -0.08
PCGF1-206ENST00000489914 NACADO15069 1562 aa14.43□□□□□ -0.1
PCGF1-206ENST00000489914 UNC13AQ9UPW8 1703 aa14.42□□□□□ -0.1
PCGF1-206ENST00000489914 DNAJC5Q9H3Z4 198 aa14.33□□□□□ -0.12
PCGF1-206ENST00000489914 BICRAQ9NZM4 1560 aa14.29□□□□□ -0.12
PCGF1-206ENST00000489914 CECR2Q9BXF3 1484 aa14.21□□□□□ -0.13
PCGF1-206ENST00000489914 CC2D2AQ9P2K1 1620 aa14.17□□□□□ -0.14
PCGF1-206ENST00000489914 FOXD1Q16676 465 aa14.14□□□□□ -0.15
PCGF1-206ENST00000489914 MSH5O43196 834 aa14.07□□□□□ -0.16
PCGF1-206ENST00000489914 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
PCGF1-206ENST00000489914 MYO15BQ96JP2 1530 aa13.96□□□□□ -0.17
PCGF1-206ENST00000489914 SCRIBQ14160 1630 aa13.89□□□□□ -0.19
PCGF1-206ENST00000489914 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
PCGF1-206ENST00000489914 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
PCGF1-206ENST00000489914 CUX2O14529 1486 aa13.67□□□□□ -0.22
PCGF1-206ENST00000489914 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
PCGF1-206ENST00000489914 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
PCGF1-206ENST00000489914 TRIM41Q8WV44 630 aa13.64□□□□□ -0.23
PCGF1-206ENST00000489914 DCAF1Q9Y4B6 1507 aa13.63□□□□□ -0.23
PCGF1-206ENST00000489914 MYT1Q01538 1121 aa13.55□□□□□ -0.24
PCGF1-206ENST00000489914 NESP48681 1621 aa13.41□□□□□ -0.26
PCGF1-206ENST00000489914 HRCP23327 699 aa13.38□□□□□ -0.27
PCGF1-206ENST00000489914 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
PCGF1-206ENST00000489914 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.29
PCGF1-206ENST00000489914 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
PCGF1-206ENST00000489914 ATAD2BQ9ULI0 1458 aa13.25□□□□□ -0.29
PCGF1-206ENST00000489914 KIF21AQ7Z4S6 1674 aa13.19□□□□□ -0.3
PCGF1-206ENST00000489914 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
PCGF1-206ENST00000489914 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
PCGF1-206ENST00000489914 BAZ1BQ9UIG0 1483 aaKnown RBP13.12□□□□□ -0.31
PCGF1-206ENST00000489914 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
PCGF1-206ENST00000489914 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
PCGF1-206ENST00000489914 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
PCGF1-206ENST00000489914 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
PCGF1-206ENST00000489914 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
PCGF1-206ENST00000489914 WDR62O43379 1518 aa12.95□□□□□ -0.34
PCGF1-206ENST00000489914 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
PCGF1-206ENST00000489914 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
PCGF1-206ENST00000489914 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
PCGF1-206ENST00000489914 RIMBP3CA6NJZ7 1639 aa12.94□□□□□ -0.34
PCGF1-206ENST00000489914 RIMBP3BA6NNM3 1639 aa12.94□□□□□ -0.34
PCGF1-206ENST00000489914 RIMBP3Q9UFD9 1639 aa12.94□□□□□ -0.34
PCGF1-206ENST00000489914 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.34
PCGF1-206ENST00000489914 MROH2BQ7Z745 1585 aa12.89□□□□□ -0.35
PCGF1-206ENST00000489914 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
PCGF1-206ENST00000489914 CYB5RLQ6IPT4 315 aa12.87□□□□□ -0.35
PCGF1-206ENST00000489914 TTBK1Q5TCY1 1321 aaPredicted RBP12.87□□□□□ -0.35
PCGF1-206ENST00000489914 ZEB1P37275 1124 aaPredicted RBP12.86□□□□□ -0.35
PCGF1-206ENST00000489914 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
PCGF1-206ENST00000489914 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
PCGF1-206ENST00000489914 ARHGEF11O15085 1522 aa12.81□□□□□ -0.36
PCGF1-206ENST00000489914 WIZO95785 1651 aa12.75□□□□□ -0.37
PCGF1-206ENST00000489914 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
PCGF1-206ENST00000489914 PCGF6Q9BYE7 350 aa12.74□□□□□ -0.37
PCGF1-206ENST00000489914 ZNF608Q9ULD9 1512 aaPredicted RBP12.7□□□□□ -0.38
PCGF1-206ENST00000489914 FBLN2P98095 1184 aa12.67□□□□□ -0.38
PCGF1-206ENST00000489914 ARAP1Q96P48 1450 aa12.66□□□□□ -0.38
PCGF1-206ENST00000489914 CFTRP13569 1480 aa12.65□□□□□ -0.38
PCGF1-206ENST00000489914 CHD1O14646 1710 aa12.62□□□□□ -0.39
PCGF1-206ENST00000489914 PPARGC1BQ86YN6 1023 aaKnown RBP12.62□□□□□ -0.39
PCGF1-206ENST00000489914 IFT140Q96RY7 1462 aa12.61□□□□□ -0.39
PCGF1-206ENST00000489914 SCAF1Q9H7N4 1312 aaKnown RBP12.6□□□□□ -0.39
PCGF1-206ENST00000489914 TRIM26Q12899 539 aaPredicted RBP12.58□□□□□ -0.4
PCGF1-206ENST00000489914 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
PCGF1-206ENST00000489914 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.41e-9■■■■□ 22.4
PCGF1-206ENST00000489914 TOPBP1Q92547 1522 aa12.52□□□□□ -0.41
PCGF1-206ENST00000489914 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
PCGF1-206ENST00000489914 RSF1Q96T23 1441 aaPredicted RBP12.51□□□□□ -0.41
PCGF1-206ENST00000489914 TOP2AP11388 1531 aaKnown RBP12.46□□□□□ -0.42
PCGF1-206ENST00000489914 CENPBP07199 599 aaPredicted RBP12.45□□□□□ -0.42
PCGF1-206ENST00000489914 ACIN1Q9UKV3 1341 aaKnown RBP12.43□□□□□ -0.42
PCGF1-206ENST00000489914 TARBP1Q13395 1621 aaKnown RBP12.42□□□□□ -0.42
PCGF1-206ENST00000489914 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
PCGF1-206ENST00000489914 CHMP7Q8WUX9 453 aaPredicted RBP12.42□□□□□ -0.42
PCGF1-206ENST00000489914 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
PCGF1-206ENST00000489914 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.42
PCGF1-206ENST00000489914 ILDR1Q86SU0 546 aaPredicted RBP12.4□□□□□ -0.42
PCGF1-206ENST00000489914 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
PCGF1-206ENST00000489914 CCDC88BA6NC98 1476 aa12.39□□□□□ -0.43
PCGF1-206ENST00000489914 RAD54L2Q9Y4B4 1467 aa12.38□□□□□ -0.43
PCGF1-206ENST00000489914 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
PCGF1-206ENST00000489914 SNAPC4Q5SXM2 1469 aa12.37□□□□□ -0.43
PCGF1-206ENST00000489914 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
PCGF1-206ENST00000489914 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
PCGF1-206ENST00000489914 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
PCGF1-206ENST00000489914 SOGA1O94964 1423 aa12.33□□□□□ -0.44
PCGF1-206ENST00000489914 POTEHQ6S545 545 aa12.3□□□□□ -0.44
PCGF1-206ENST00000489914 MAGI1Q96QZ7 1491 aaPredicted RBP12.25□□□□□ -0.45
PCGF1-206ENST00000489914 ERCC6L2Q5T890 1561 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms