RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 NISCHQ9Y2I1 1504 aa41.59■■■■■ 4.25
SYNGR1-207ENST00000489206 CCDC180Q9P1Z9 1646 aa35.79■■■■□ 3.32
SYNGR1-207ENST00000489206 ZCCHC6Q5VYS8 1495 aaKnown RBP35.18■■■■□ 3.22
SYNGR1-207ENST00000489206 SHROOM4Q9ULL8 1493 aa34.73■■■■□ 3.15
SYNGR1-207ENST00000489206 DCAF1Q9Y4B6 1507 aa34.39■■■■□ 3.1
SYNGR1-207ENST00000489206 ABCC9O60706 1549 aa34.02■■■■□ 3.04
SYNGR1-207ENST00000489206 SUPT5HO00267 1087 aaKnown RBP33.96■■■■□ 3.03
SYNGR1-207ENST00000489206 DCAF8L2P0C7V8 631 aa33.94■■■■□ 3.02
SYNGR1-207ENST00000489206 MYO15BQ96JP2 1530 aa33.54■■■□□ 2.96
SYNGR1-207ENST00000489206 CHIC1Q5VXU3 224 aa33.11■■■□□ 2.89
SYNGR1-207ENST00000489206 SCRIBQ14160 1630 aa33.08■■■□□ 2.89
SYNGR1-207ENST00000489206 NACADO15069 1562 aa33.02■■■□□ 2.88
SYNGR1-207ENST00000489206 RSF1Q96T23 1441 aaPredicted RBP32.69■■■□□ 2.82
SYNGR1-207ENST00000489206 RB1CC1Q8TDY2 1594 aa32.61■■■□□ 2.81
SYNGR1-207ENST00000489206 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
SYNGR1-207ENST00000489206 MROH2BQ7Z745 1585 aa32.19■■■□□ 2.74
SYNGR1-207ENST00000489206 UNC13AQ9UPW8 1703 aa32.13■■■□□ 2.73
SYNGR1-207ENST00000489206 BAZ1AQ9NRL2 1556 aaPredicted RBP32.04■■■□□ 2.72
SYNGR1-207ENST00000489206 WIZO95785 1651 aa32.03■■■□□ 2.72
SYNGR1-207ENST00000489206 LOC105371045A0A1W2PR82 267 aa31.88■■■□□ 2.69
SYNGR1-207ENST00000489206 PABPN1Q86U42 306 aaKnown RBP eCLIP31.87■■■□□ 2.69
SYNGR1-207ENST00000489206 TRIM41Q8WV44 630 aa31.85■■■□□ 2.69
SYNGR1-207ENST00000489206 BICRAQ9NZM4 1560 aa31.78■■■□□ 2.68
SYNGR1-207ENST00000489206 SMARCA4P51532 1647 aa31.77■■■□□ 2.68
SYNGR1-207ENST00000489206 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.67
SYNGR1-207ENST00000489206 HRCP23327 699 aa31.7■■■□□ 2.66
SYNGR1-207ENST00000489206 EIF4G1Q04637 1599 aaKnown RBP31.69■■■□□ 2.66
SYNGR1-207ENST00000489206 PCGF6Q9BYE7 350 aa31.65■■■□□ 2.66
SYNGR1-207ENST00000489206 SMARCA2P51531 1590 aa31.45■■■□□ 2.63
SYNGR1-207ENST00000489206 CCDC88BA6NC98 1476 aa31.37■■■□□ 2.61
SYNGR1-207ENST00000489206 TRIM26Q12899 539 aaPredicted RBP31.37■■■□□ 2.61
SYNGR1-207ENST00000489206 PEG3Q9GZU2 1588 aa31.31■■■□□ 2.6
SYNGR1-207ENST00000489206 FAM9AQ8IZU1 332 aaPredicted RBP31.3■■■□□ 2.6
SYNGR1-207ENST00000489206 DNAJC5BQ9UF47 199 aa31.16■■■□□ 2.58
SYNGR1-207ENST00000489206 ABCC8Q09428 1581 aa31.12■■■□□ 2.57
SYNGR1-207ENST00000489206 EEA1Q15075 1411 aa30.92■■■□□ 2.54
SYNGR1-207ENST00000489206 ATAD2BQ9ULI0 1458 aa30.92■■■□□ 2.54
SYNGR1-207ENST00000489206 EHMT2Q96KQ7 1210 aa30.83■■■□□ 2.53
SYNGR1-207ENST00000489206 BAZ1BQ9UIG0 1483 aaKnown RBP30.83■■■□□ 2.53
SYNGR1-207ENST00000489206 PPARGC1BQ86YN6 1023 aaKnown RBP30.75■■■□□ 2.51
SYNGR1-207ENST00000489206 CC2D2AQ9P2K1 1620 aa30.74■■■□□ 2.51
SYNGR1-207ENST00000489206 WRNQ14191 1432 aaPredicted RBP eCLIP30.74■■■□□ 2.51
SYNGR1-207ENST00000489206 ZEB1P37275 1124 aaPredicted RBP30.74■■■□□ 2.51
SYNGR1-207ENST00000489206 SOGA1O94964 1423 aa30.73■■■□□ 2.51
SYNGR1-207ENST00000489206 TNIKQ9UKE5 1360 aa30.66■■■□□ 2.5
SYNGR1-207ENST00000489206 SYNJ1O43426 1573 aa30.62■■■□□ 2.49
SYNGR1-207ENST00000489206 CSRNP3Q8WYN3 585 aa30.59■■■□□ 2.49
SYNGR1-207ENST00000489206 CEP162Q5TB80 1403 aa30.59■■■□□ 2.49
SYNGR1-207ENST00000489206 GOLGA3Q08378 1498 aa30.56■■■□□ 2.48
SYNGR1-207ENST00000489206 RUSC2Q8N2Y8 1516 aa30.55■■■□□ 2.48
SYNGR1-207ENST00000489206 HMGXB3Q12766 1538 aa30.54■■■□□ 2.48
SYNGR1-207ENST00000489206 KIF21BO75037 1637 aa30.5■■■□□ 2.47
SYNGR1-207ENST00000489206 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
SYNGR1-207ENST00000489206 CEP164Q9UPV0 1460 aa30.43■■■□□ 2.46
SYNGR1-207ENST00000489206 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
SYNGR1-207ENST00000489206 BIVM-ERCC5R4GMW8 1640 aa30.38■■■□□ 2.45
SYNGR1-207ENST00000489206 UBTFP17480 764 aaKnown RBP30.32■■■□□ 2.44
SYNGR1-207ENST00000489206 PRDM2Q13029 1718 aa30.16■■■□□ 2.42
SYNGR1-207ENST00000489206 CFTRP13569 1480 aa30.09■■■□□ 2.41
SYNGR1-207ENST00000489206 CLIP1P30622 1438 aa30.09■■■□□ 2.41
SYNGR1-207ENST00000489206 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
SYNGR1-207ENST00000489206 RAPGEF2Q9Y4G8 1499 aa30.07■■■□□ 2.4
SYNGR1-207ENST00000489206 CUX1P39880 1505 aa30.03■■■□□ 2.4
SYNGR1-207ENST00000489206 VPS8Q8N3P4 1428 aa30■■■□□ 2.39
SYNGR1-207ENST00000489206 PRXQ9BXM0 1461 aa29.96■■■□□ 2.39
SYNGR1-207ENST00000489206 CCER1Q8TC90 406 aaPredicted RBP29.95■■■□□ 2.38
SYNGR1-207ENST00000489206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.92■■■□□ 2.38
SYNGR1-207ENST00000489206 KIF27Q86VH2 1401 aa29.86■■■□□ 2.37
SYNGR1-207ENST00000489206 TTBK1Q5TCY1 1321 aaPredicted RBP29.84■■■□□ 2.37
SYNGR1-207ENST00000489206 CADPSQ9ULU8 1353 aa29.74■■■□□ 2.35
SYNGR1-207ENST00000489206 APLP2Q06481 763 aa29.7■■■□□ 2.35
SYNGR1-207ENST00000489206 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
SYNGR1-207ENST00000489206 NESP48681 1621 aa29.55■■■□□ 2.32
SYNGR1-207ENST00000489206 CUX2O14529 1486 aa29.54■■■□□ 2.32
SYNGR1-207ENST00000489206 FGD5Q6ZNL6 1462 aa29.51■■■□□ 2.32
SYNGR1-207ENST00000489206 RANGAP1P46060 587 aaPredicted RBP29.48■■■□□ 2.31
SYNGR1-207ENST00000489206 IGF1RP08069 1367 aa29.45■■■□□ 2.31
SYNGR1-207ENST00000489206 ARHGAP35Q9NRY4 1499 aa29.45■■■□□ 2.3
SYNGR1-207ENST00000489206 FANCD2Q9BXW9 1451 aa29.44■■■□□ 2.3
SYNGR1-207ENST00000489206 DNMBPQ6XZF7 1577 aa29.42■■■□□ 2.3
SYNGR1-207ENST00000489206 HNRNPUL2Q1KMD3 747 aaKnown RBP29.4■■■□□ 2.3
SYNGR1-207ENST00000489206 CARMIL1Q5VZK9 1371 aa29.34■■■□□ 2.29
SYNGR1-207ENST00000489206 RRBP1Q9P2E9 1410 aaKnown RBP29.3■■■□□ 2.28
SYNGR1-207ENST00000489206 MAP3K1Q13233 1512 aa29.29■■■□□ 2.28
SYNGR1-207ENST00000489206 ABCA10Q8WWZ4 1543 aa29.28■■■□□ 2.28
SYNGR1-207ENST00000489206 LAMC3Q9Y6N6 1575 aa29.27■■■□□ 2.28
SYNGR1-207ENST00000489206 TOPBP1Q92547 1522 aa29.26■■■□□ 2.28
SYNGR1-207ENST00000489206 DIEXFQ68CQ4 756 aaKnown RBP29.24■■■□□ 2.27
SYNGR1-207ENST00000489206 KANK4Q5T7N3 995 aaPredicted RBP29.22■■■□□ 2.27
SYNGR1-207ENST00000489206 CUL7Q14999 1698 aa29.22■■■□□ 2.27
SYNGR1-207ENST00000489206 POLA1P09884 1462 aaPredicted RBP29.21■■■□□ 2.27
SYNGR1-207ENST00000489206 CLSPNQ9HAW4 1339 aa29.2■■■□□ 2.26
SYNGR1-207ENST00000489206 ERCC6Q03468 1493 aa29.2■■■□□ 2.26
SYNGR1-207ENST00000489206 TIAM1Q13009 1591 aa29.19■■■□□ 2.26
SYNGR1-207ENST00000489206 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
SYNGR1-207ENST00000489206 ZNF316A6NFI3 1004 aaPredicted RBP29.18■■■□□ 2.26
SYNGR1-207ENST00000489206 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
SYNGR1-207ENST00000489206 FHAD1B1AJZ9 1412 aa29.12■■■□□ 2.25
SYNGR1-207ENST00000489206 RAD54L2Q9Y4B4 1467 aa29.11■■■□□ 2.25
SYNGR1-207ENST00000489206 CFAP43Q8NDM7 1665 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms