RNA–Protein interactions for RNA: ENST00000486598.1

CPA4-206, Transcript of carboxypeptidase A4, humanhuman

TSL 5

Gene CPA4, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-206ENST00000486598 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
CPA4-206ENST00000486598 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
CPA4-206ENST00000486598 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
CPA4-206ENST00000486598 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
CPA4-206ENST00000486598 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
CPA4-206ENST00000486598 FOXD1Q16676 465 aa14.67□□□□□ -0.06
CPA4-206ENST00000486598 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
CPA4-206ENST00000486598 MSH5O43196 834 aa13.89□□□□□ -0.19
CPA4-206ENST00000486598 CCDC180Q9P1Z9 1646 aa13.83□□□□□ -0.2
CPA4-206ENST00000486598 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
CPA4-206ENST00000486598 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
CPA4-206ENST00000486598 PPP6R1Q9UPN7 881 aa13.42□□□□□ -0.26
CPA4-206ENST00000486598 ABCC9O60706 1549 aa13.36□□□□□ -0.27
CPA4-206ENST00000486598 ADRA2BP18089 450 aa13.35□□□□□ -0.27
CPA4-206ENST00000486598 NACADO15069 1562 aa12.96□□□□□ -0.33
CPA4-206ENST00000486598 RB1CC1Q8TDY2 1594 aa12.94□□□□□ -0.34
CPA4-206ENST00000486598 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
CPA4-206ENST00000486598 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
CPA4-206ENST00000486598 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
CPA4-206ENST00000486598 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.37
CPA4-206ENST00000486598 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
CPA4-206ENST00000486598 BICRAQ9NZM4 1560 aa12.57□□□□□ -0.4
CPA4-206ENST00000486598 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
CPA4-206ENST00000486598 SHROOM4Q9ULL8 1493 aa12.46□□□□□ -0.41
CPA4-206ENST00000486598 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
CPA4-206ENST00000486598 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
CPA4-206ENST00000486598 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
CPA4-206ENST00000486598 DNAJC5BQ9UF47 199 aa12.24□□□□□ -0.45
CPA4-206ENST00000486598 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
CPA4-206ENST00000486598 EIF4G1Q04637 1599 aaKnown RBP12.22□□□□□ -0.45
CPA4-206ENST00000486598 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
CPA4-206ENST00000486598 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
CPA4-206ENST00000486598 SMARCA4P51532 1647 aa12.03□□□□□ -0.48
CPA4-206ENST00000486598 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.48
CPA4-206ENST00000486598 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
CPA4-206ENST00000486598 PEG3Q9GZU2 1588 aa11.96□□□□□ -0.5
CPA4-206ENST00000486598 NCAPD3P42695 1498 aa11.94□□□□□ -0.5
CPA4-206ENST00000486598 SMARCA2P51531 1590 aa11.93□□□□□ -0.5
CPA4-206ENST00000486598 ATAD2BQ9ULI0 1458 aa11.93□□□□□ -0.5
CPA4-206ENST00000486598 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
CPA4-206ENST00000486598 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
CPA4-206ENST00000486598 DCAF8L1A6NGE4 600 aa11.89□□□□□ -0.51
CPA4-206ENST00000486598 WIZO95785 1651 aa11.82□□□□□ -0.52
CPA4-206ENST00000486598 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
CPA4-206ENST00000486598 BAZ1BQ9UIG0 1483 aaKnown RBP11.81□□□□□ -0.52
CPA4-206ENST00000486598 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
CPA4-206ENST00000486598 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
CPA4-206ENST00000486598 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.53
CPA4-206ENST00000486598 TOP2AP11388 1531 aaKnown RBP11.68□□□□□ -0.54
CPA4-206ENST00000486598 LAMC3Q9Y6N6 1575 aa11.64□□□□□ -0.55
CPA4-206ENST00000486598 C1QBPQ07021 282 aaKnown RBP11.62□□□□□ -0.55
CPA4-206ENST00000486598 NESP48681 1621 aa11.59□□□□□ -0.55
CPA4-206ENST00000486598 CNKSR2Q8WXI2 1034 aa11.58□□□□□ -0.56
CPA4-206ENST00000486598 RNF216Q9NWF9 866 aaPredicted RBP11.58□□□□□ -0.56
CPA4-206ENST00000486598 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
CPA4-206ENST00000486598 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
CPA4-206ENST00000486598 KIF21AQ7Z4S6 1674 aa11.53□□□□□ -0.56
CPA4-206ENST00000486598 CCDC88BA6NC98 1476 aa11.53□□□□□ -0.56
CPA4-206ENST00000486598 CFTRP13569 1480 aa11.52□□□□□ -0.56
CPA4-206ENST00000486598 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
CPA4-206ENST00000486598 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
CPA4-206ENST00000486598 THOC2Q8NI27 1593 aaKnown RBP11.48□□□□□ -0.57
CPA4-206ENST00000486598 CUX2O14529 1486 aa11.44□□□□□ -0.58
CPA4-206ENST00000486598 FANCD2Q9BXW9 1451 aa11.42□□□□□ -0.58
CPA4-206ENST00000486598 CEP164Q9UPV0 1460 aa11.4□□□□□ -0.58
CPA4-206ENST00000486598 SUPT5HO00267 1087 aaKnown RBP11.4□□□□□ -0.58
CPA4-206ENST00000486598 WDR62O43379 1518 aa11.39□□□□□ -0.59
CPA4-206ENST00000486598 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
CPA4-206ENST00000486598 URB2Q14146 1524 aaKnown RBP11.31□□□□□ -0.6
CPA4-206ENST00000486598 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
CPA4-206ENST00000486598 DNMBPQ6XZF7 1577 aa11.27□□□□□ -0.61
CPA4-206ENST00000486598 TOPBP1Q92547 1522 aa11.25□□□□□ -0.61
CPA4-206ENST00000486598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
CPA4-206ENST00000486598 KCNA4P22459 653 aa11.21□□□□□ -0.61
CPA4-206ENST00000486598 CUX1P39880 1505 aa11.19□□□□□ -0.62
CPA4-206ENST00000486598 TARBP1Q13395 1621 aaKnown RBP11.18□□□□□ -0.62
CPA4-206ENST00000486598 IFT140Q96RY7 1462 aa11.17□□□□□ -0.62
CPA4-206ENST00000486598 BIVM-ERCC5R4GMW8 1640 aa11.16□□□□□ -0.62
CPA4-206ENST00000486598 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
CPA4-206ENST00000486598 NCBP3Q53F19 620 aaKnown RBP11.14□□□□□ -0.63
CPA4-206ENST00000486598 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
CPA4-206ENST00000486598 TOP2BQ02880 1626 aa11.13□□□□□ -0.63
CPA4-206ENST00000486598 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
CPA4-206ENST00000486598 ZNF608Q9ULD9 1512 aaPredicted RBP11.1□□□□□ -0.63
CPA4-206ENST00000486598 SYNJ1O43426 1573 aa11.1□□□□□ -0.63
CPA4-206ENST00000486598 EIF4G3O43432 1585 aaKnown RBP11.1□□□□□ -0.63
CPA4-206ENST00000486598 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.63
CPA4-206ENST00000486598 SOGA1O94964 1423 aa11.09□□□□□ -0.63
CPA4-206ENST00000486598 POTEHQ6S545 545 aa11.08□□□□□ -0.64
CPA4-206ENST00000486598 RAD54L2Q9Y4B4 1467 aa11.07□□□□□ -0.64
CPA4-206ENST00000486598 EHMT2Q96KQ7 1210 aa11.07□□□□□ -0.64
CPA4-206ENST00000486598 ABCA10Q8WWZ4 1543 aa11.05□□□□□ -0.64
CPA4-206ENST00000486598 AQRO60306 1485 aaKnown RBP eCLIP11.03□□□□□ -0.64
CPA4-206ENST00000486598 PBRM1Q86U86 1689 aa11.03□□□□□ -0.64
CPA4-206ENST00000486598 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.64
CPA4-206ENST00000486598 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
CPA4-206ENST00000486598 TDRD9Q8NDG6 1382 aaKnown RBP11□□□□□ -0.65
CPA4-206ENST00000486598 CHD1O14646 1710 aa10.98□□□□□ -0.65
CPA4-206ENST00000486598 NPM3O75607 178 aaKnown RBP10.98□□□□□ -0.65
CPA4-206ENST00000486598 GAPVD1Q14C86 1478 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms