RNA–Protein interactions for RNA: ENST00000485545.5

RFC2-208, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-208ENST00000485545 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
RFC2-208ENST00000485545 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
RFC2-208ENST00000485545 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.47
RFC2-208ENST00000485545 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
RFC2-208ENST00000485545 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
RFC2-208ENST00000485545 FOXD1Q16676 465 aa15.93■□□□□ 0.14
RFC2-208ENST00000485545 CCDC180Q9P1Z9 1646 aa15.8■□□□□ 0.12
RFC2-208ENST00000485545 PLPPR3Q6T4P5 718 aa15.79■□□□□ 0.12
RFC2-208ENST00000485545 PPP6R1Q9UPN7 881 aa15.11■□□□□ 0.01
RFC2-208ENST00000485545 ADRA2BP18089 450 aa15.09■□□□□ 0.01
RFC2-208ENST00000485545 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
RFC2-208ENST00000485545 DCAF1Q9Y4B6 1507 aa15.02□□□□□ -0.01
RFC2-208ENST00000485545 PIAS4Q8N2W9 510 aaPredicted RBP15□□□□□ -0.01
RFC2-208ENST00000485545 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
RFC2-208ENST00000485545 ABCC9O60706 1549 aa14.91□□□□□ -0.02
RFC2-208ENST00000485545 MSH5O43196 834 aa14.89□□□□□ -0.03
RFC2-208ENST00000485545 NACADO15069 1562 aa14.81□□□□□ -0.04
RFC2-208ENST00000485545 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
RFC2-208ENST00000485545 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
RFC2-208ENST00000485545 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
RFC2-208ENST00000485545 SCRIBQ14160 1630 aa14.28□□□□□ -0.12
RFC2-208ENST00000485545 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
RFC2-208ENST00000485545 BICRAQ9NZM4 1560 aa14.09□□□□□ -0.15
RFC2-208ENST00000485545 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
RFC2-208ENST00000485545 SCAF1Q9H7N4 1312 aaKnown RBP13.96□□□□□ -0.17
RFC2-208ENST00000485545 BAZ1AQ9NRL2 1556 aaPredicted RBP13.94□□□□□ -0.18
RFC2-208ENST00000485545 POTEDQ86YR6 584 aa13.86□□□□□ -0.19
RFC2-208ENST00000485545 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.2
RFC2-208ENST00000485545 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
RFC2-208ENST00000485545 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
RFC2-208ENST00000485545 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
RFC2-208ENST00000485545 PEG3Q9GZU2 1588 aa13.76□□□□□ -0.21
RFC2-208ENST00000485545 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
RFC2-208ENST00000485545 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
RFC2-208ENST00000485545 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
RFC2-208ENST00000485545 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
RFC2-208ENST00000485545 SUPT5HO00267 1087 aaKnown RBP13.69□□□□□ -0.22
RFC2-208ENST00000485545 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
RFC2-208ENST00000485545 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
RFC2-208ENST00000485545 ATAD2BQ9ULI0 1458 aa13.66□□□□□ -0.22
RFC2-208ENST00000485545 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
RFC2-208ENST00000485545 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
RFC2-208ENST00000485545 BAZ1BQ9UIG0 1483 aaKnown RBP13.58□□□□□ -0.24
RFC2-208ENST00000485545 WIZO95785 1651 aa13.56□□□□□ -0.24
RFC2-208ENST00000485545 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
RFC2-208ENST00000485545 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
RFC2-208ENST00000485545 DNAJC5BQ9UF47 199 aa13.51□□□□□ -0.25
RFC2-208ENST00000485545 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
RFC2-208ENST00000485545 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
RFC2-208ENST00000485545 RNF216Q9NWF9 866 aaPredicted RBP13.34□□□□□ -0.27
RFC2-208ENST00000485545 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
RFC2-208ENST00000485545 CADPSQ9ULU8 1353 aa13.28□□□□□ -0.28
RFC2-208ENST00000485545 CFTRP13569 1480 aa13.28□□□□□ -0.28
RFC2-208ENST00000485545 LAMC3Q9Y6N6 1575 aa13.21□□□□□ -0.29
RFC2-208ENST00000485545 KCNA4P22459 653 aa13.21□□□□□ -0.29
RFC2-208ENST00000485545 NPM3O75607 178 aaKnown RBP13.2□□□□□ -0.3
RFC2-208ENST00000485545 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
RFC2-208ENST00000485545 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
RFC2-208ENST00000485545 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
RFC2-208ENST00000485545 FANCD2Q9BXW9 1451 aa13.06□□□□□ -0.32
RFC2-208ENST00000485545 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
RFC2-208ENST00000485545 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
RFC2-208ENST00000485545 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
RFC2-208ENST00000485545 CEP164Q9UPV0 1460 aa13.02□□□□□ -0.33
RFC2-208ENST00000485545 NESP48681 1621 aa12.99□□□□□ -0.33
RFC2-208ENST00000485545 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
RFC2-208ENST00000485545 EEA1Q15075 1411 aa12.93□□□□□ -0.34
RFC2-208ENST00000485545 ERCC6Q03468 1493 aa12.92□□□□□ -0.34
RFC2-208ENST00000485545 DNMBPQ6XZF7 1577 aa12.92□□□□□ -0.34
RFC2-208ENST00000485545 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
RFC2-208ENST00000485545 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
RFC2-208ENST00000485545 CUX1P39880 1505 aa12.89□□□□□ -0.35
RFC2-208ENST00000485545 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
RFC2-208ENST00000485545 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
RFC2-208ENST00000485545 WDR62O43379 1518 aa12.85□□□□□ -0.35
RFC2-208ENST00000485545 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
RFC2-208ENST00000485545 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
RFC2-208ENST00000485545 SOGA1O94964 1423 aa12.8□□□□□ -0.36
RFC2-208ENST00000485545 KIF27Q86VH2 1401 aa12.8□□□□□ -0.36
RFC2-208ENST00000485545 FGD5Q6ZNL6 1462 aa12.8□□□□□ -0.36
RFC2-208ENST00000485545 POLA1P09884 1462 aaPredicted RBP12.79□□□□□ -0.36
RFC2-208ENST00000485545 WDR97A6NE52 1622 aa12.79□□□□□ -0.36
RFC2-208ENST00000485545 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
RFC2-208ENST00000485545 IFT140Q96RY7 1462 aa12.78□□□□□ -0.36
RFC2-208ENST00000485545 THOC2Q8NI27 1593 aaKnown RBP12.75□□□□□ -0.37
RFC2-208ENST00000485545 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
RFC2-208ENST00000485545 CUX2O14529 1486 aa12.72□□□□□ -0.37
RFC2-208ENST00000485545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.38
RFC2-208ENST00000485545 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
RFC2-208ENST00000485545 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
RFC2-208ENST00000485545 ERICH3Q5RHP9 1530 aa12.66□□□□□ -0.38
RFC2-208ENST00000485545 IGF1RP08069 1367 aa12.66□□□□□ -0.38
RFC2-208ENST00000485545 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
RFC2-208ENST00000485545 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
RFC2-208ENST00000485545 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
RFC2-208ENST00000485545 GRIN2BQ13224 1484 aa12.62□□□□□ -0.39
RFC2-208ENST00000485545 ABCA5Q8WWZ7 1642 aa12.62□□□□□ -0.39
RFC2-208ENST00000485545 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
RFC2-208ENST00000485545 KIF21BO75037 1637 aa12.6□□□□□ -0.39
RFC2-208ENST00000485545 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms