RNA–Protein interactions for RNA: ENST00000484991.1

ATXN2-211, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-211ENST00000484991 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
ATXN2-211ENST00000484991 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
ATXN2-211ENST00000484991 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
ATXN2-211ENST00000484991 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
ATXN2-211ENST00000484991 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
ATXN2-211ENST00000484991 FOXD1Q16676 465 aa17.16■□□□□ 0.34
ATXN2-211ENST00000484991 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
ATXN2-211ENST00000484991 MSH5O43196 834 aa16.14■□□□□ 0.17
ATXN2-211ENST00000484991 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
ATXN2-211ENST00000484991 PPP6R1Q9UPN7 881 aa15.99■□□□□ 0.15
ATXN2-211ENST00000484991 ADRA2BP18089 450 aa15.91■□□□□ 0.14
ATXN2-211ENST00000484991 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
ATXN2-211ENST00000484991 POTEDQ86YR6 584 aa15.74■□□□□ 0.11
ATXN2-211ENST00000484991 ABCC9O60706 1549 aa15.56■□□□□ 0.08
ATXN2-211ENST00000484991 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
ATXN2-211ENST00000484991 NACADO15069 1562 aa14.9□□□□□ -0.02
ATXN2-211ENST00000484991 MYO15BQ96JP2 1530 aa14.76□□□□□ -0.05
ATXN2-211ENST00000484991 DNAJC5BQ9UF47 199 aa14.74□□□□□ -0.05
ATXN2-211ENST00000484991 UNC13AQ9UPW8 1703 aa14.74□□□□□ -0.05
ATXN2-211ENST00000484991 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
ATXN2-211ENST00000484991 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
ATXN2-211ENST00000484991 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
ATXN2-211ENST00000484991 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
ATXN2-211ENST00000484991 DCAF8L2P0C7V8 631 aa14.61□□□□□ -0.07
ATXN2-211ENST00000484991 MAPK8IP2Q13387 824 aaPredicted RBP14.6□□□□□ -0.07
ATXN2-211ENST00000484991 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
ATXN2-211ENST00000484991 SCRIBQ14160 1630 aa14.4□□□□□ -0.1
ATXN2-211ENST00000484991 SHROOM4Q9ULL8 1493 aa14.39□□□□□ -0.11
ATXN2-211ENST00000484991 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
ATXN2-211ENST00000484991 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
ATXN2-211ENST00000484991 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
ATXN2-211ENST00000484991 CC2D2AQ9P2K1 1620 aa14.14□□□□□ -0.15
ATXN2-211ENST00000484991 HOXD11P31277 338 aaPredicted RBP14.11□□□□□ -0.15
ATXN2-211ENST00000484991 CNKSR2Q8WXI2 1034 aa14.08□□□□□ -0.16
ATXN2-211ENST00000484991 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
ATXN2-211ENST00000484991 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
ATXN2-211ENST00000484991 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
ATXN2-211ENST00000484991 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
ATXN2-211ENST00000484991 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
ATXN2-211ENST00000484991 SMARCA4P51532 1647 aa13.78□□□□□ -0.2
ATXN2-211ENST00000484991 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
ATXN2-211ENST00000484991 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
ATXN2-211ENST00000484991 SMARCA2P51531 1590 aa13.71□□□□□ -0.22
ATXN2-211ENST00000484991 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.22
ATXN2-211ENST00000484991 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
ATXN2-211ENST00000484991 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
ATXN2-211ENST00000484991 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
ATXN2-211ENST00000484991 PEG3Q9GZU2 1588 aa13.65□□□□□ -0.22
ATXN2-211ENST00000484991 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
ATXN2-211ENST00000484991 BAZ1BQ9UIG0 1483 aaKnown RBP13.57□□□□□ -0.24
ATXN2-211ENST00000484991 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
ATXN2-211ENST00000484991 NPM3O75607 178 aaKnown RBP13.55□□□□□ -0.24
ATXN2-211ENST00000484991 WIZO95785 1651 aa13.46□□□□□ -0.26
ATXN2-211ENST00000484991 ERCC6Q03468 1493 aa13.45□□□□□ -0.26
ATXN2-211ENST00000484991 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
ATXN2-211ENST00000484991 CUX2O14529 1486 aa13.42□□□□□ -0.26
ATXN2-211ENST00000484991 NESP48681 1621 aa13.41□□□□□ -0.26
ATXN2-211ENST00000484991 KIF21AQ7Z4S6 1674 aa13.38□□□□□ -0.27
ATXN2-211ENST00000484991 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
ATXN2-211ENST00000484991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
ATXN2-211ENST00000484991 TOP2AP11388 1531 aaKnown RBP13.31□□□□□ -0.28
ATXN2-211ENST00000484991 RSF1Q96T23 1441 aaPredicted RBP13.29□□□□□ -0.28
ATXN2-211ENST00000484991 PRDM2Q13029 1718 aa13.27□□□□□ -0.28
ATXN2-211ENST00000484991 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.29
ATXN2-211ENST00000484991 CADPSQ9ULU8 1353 aa13.24□□□□□ -0.29
ATXN2-211ENST00000484991 KCNA4P22459 653 aa13.22□□□□□ -0.29
ATXN2-211ENST00000484991 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
ATXN2-211ENST00000484991 WDR62O43379 1518 aa13.18□□□□□ -0.3
ATXN2-211ENST00000484991 MRC2Q9UBG0 1479 aa13.18□□□□□ -0.3
ATXN2-211ENST00000484991 CFTRP13569 1480 aa13.16□□□□□ -0.3
ATXN2-211ENST00000484991 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
ATXN2-211ENST00000484991 FANCD2Q9BXW9 1451 aa13.13□□□□□ -0.31
ATXN2-211ENST00000484991 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
ATXN2-211ENST00000484991 CCDC88BA6NC98 1476 aa13.07□□□□□ -0.32
ATXN2-211ENST00000484991 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.33
ATXN2-211ENST00000484991 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
ATXN2-211ENST00000484991 DNMBPQ6XZF7 1577 aa12.94□□□□□ -0.34
ATXN2-211ENST00000484991 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
ATXN2-211ENST00000484991 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
ATXN2-211ENST00000484991 IFT140Q96RY7 1462 aa12.88□□□□□ -0.35
ATXN2-211ENST00000484991 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
ATXN2-211ENST00000484991 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
ATXN2-211ENST00000484991 CAPN15O75808 1086 aa12.84□□□□□ -0.35
ATXN2-211ENST00000484991 DSG3P32926 999 aa12.84□□□□□ -0.35
ATXN2-211ENST00000484991 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
ATXN2-211ENST00000484991 ZNF608Q9ULD9 1512 aaPredicted RBP12.81□□□□□ -0.36
ATXN2-211ENST00000484991 APLP2Q06481 763 aa12.8□□□□□ -0.36
ATXN2-211ENST00000484991 WDR97A6NE52 1622 aa12.79□□□□□ -0.36
ATXN2-211ENST00000484991 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
ATXN2-211ENST00000484991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
ATXN2-211ENST00000484991 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
ATXN2-211ENST00000484991 CHD1O14646 1710 aa12.77□□□□□ -0.36
ATXN2-211ENST00000484991 CUX1P39880 1505 aa12.75□□□□□ -0.37
ATXN2-211ENST00000484991 FGD5Q6ZNL6 1462 aa12.73□□□□□ -0.37
ATXN2-211ENST00000484991 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.37
ATXN2-211ENST00000484991 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
ATXN2-211ENST00000484991 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
ATXN2-211ENST00000484991 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
ATXN2-211ENST00000484991 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
ATXN2-211ENST00000484991 BIVM-ERCC5R4GMW8 1640 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms