RNA–Protein interactions for RNA: ENST00000483485.5

SNX5-211, Transcript of sorting nexin 5, humanhuman

TSL 2

Gene SNX5, Length 3,087 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-211ENST00000483485 NISCHQ9Y2I1 1504 aa16.18■□□□□ 0.18
SNX5-211ENST00000483485 CCDC180Q9P1Z9 1646 aa13.94□□□□□ -0.18
SNX5-211ENST00000483485 ZCCHC6Q5VYS8 1495 aaKnown RBP13.64□□□□□ -0.23
SNX5-211ENST00000483485 SHROOM4Q9ULL8 1493 aa13.5□□□□□ -0.25
SNX5-211ENST00000483485 DCAF8L2P0C7V8 631 aa13.35□□□□□ -0.27
SNX5-211ENST00000483485 DCAF1Q9Y4B6 1507 aa13.33□□□□□ -0.28
SNX5-211ENST00000483485 SUPT5HO00267 1087 aaKnown RBP13.12□□□□□ -0.31
SNX5-211ENST00000483485 MYO15BQ96JP2 1530 aa13.04□□□□□ -0.32
SNX5-211ENST00000483485 ABCC9O60706 1549 aa13□□□□□ -0.33
SNX5-211ENST00000483485 SCRIBQ14160 1630 aa12.93□□□□□ -0.34
SNX5-211ENST00000483485 NACADO15069 1562 aa12.91□□□□□ -0.34
SNX5-211ENST00000483485 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
SNX5-211ENST00000483485 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
SNX5-211ENST00000483485 CHIC1Q5VXU3 224 aa12.69□□□□□ -0.38
SNX5-211ENST00000483485 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
SNX5-211ENST00000483485 MYT1Q01538 1121 aa12.67□□□□□ -0.38
SNX5-211ENST00000483485 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
SNX5-211ENST00000483485 UNC13AQ9UPW8 1703 aa12.57□□□□□ -0.4
SNX5-211ENST00000483485 MROH2BQ7Z745 1585 aa12.54□□□□□ -0.4
SNX5-211ENST00000483485 WIZO95785 1651 aa12.47□□□□□ -0.41
SNX5-211ENST00000483485 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
SNX5-211ENST00000483485 BICRAQ9NZM4 1560 aa12.4□□□□□ -0.43
SNX5-211ENST00000483485 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
SNX5-211ENST00000483485 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNX5-211ENST00000483485 TOP2AP11388 1531 aaKnown RBP12.3□□□□□ -0.44
SNX5-211ENST00000483485 TRIM41Q8WV44 630 aa12.27□□□□□ -0.44
SNX5-211ENST00000483485 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
SNX5-211ENST00000483485 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
SNX5-211ENST00000483485 SMARCA2P51531 1590 aa12.21□□□□□ -0.45
SNX5-211ENST00000483485 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
SNX5-211ENST00000483485 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
SNX5-211ENST00000483485 TTBK1Q5TCY1 1321 aaPredicted RBP12.18□□□□□ -0.46
SNX5-211ENST00000483485 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
SNX5-211ENST00000483485 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
SNX5-211ENST00000483485 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
SNX5-211ENST00000483485 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
SNX5-211ENST00000483485 PRKCSHP14314 528 aaPredicted RBP12.05□□□□□ -0.48
SNX5-211ENST00000483485 PCGF6Q9BYE7 350 aa12□□□□□ -0.49
SNX5-211ENST00000483485 EHMT2Q96KQ7 1210 aa11.97□□□□□ -0.49
SNX5-211ENST00000483485 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
SNX5-211ENST00000483485 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
SNX5-211ENST00000483485 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
SNX5-211ENST00000483485 HRCP23327 699 aa11.92□□□□□ -0.5
SNX5-211ENST00000483485 SOGA1O94964 1423 aa11.9□□□□□ -0.5
SNX5-211ENST00000483485 SYNJ1O43426 1573 aa11.88□□□□□ -0.51
SNX5-211ENST00000483485 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
SNX5-211ENST00000483485 EEA1Q15075 1411 aa11.86□□□□□ -0.51
SNX5-211ENST00000483485 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
SNX5-211ENST00000483485 CSRNP3Q8WYN3 585 aa11.82□□□□□ -0.52
SNX5-211ENST00000483485 SCAF1Q9H7N4 1312 aaKnown RBP11.8□□□□□ -0.52
SNX5-211ENST00000483485 TOP2BQ02880 1626 aa11.78□□□□□ -0.52
SNX5-211ENST00000483485 TNIKQ9UKE5 1360 aa11.77□□□□□ -0.53
SNX5-211ENST00000483485 BIVM-ERCC5R4GMW8 1640 aa11.76□□□□□ -0.53
SNX5-211ENST00000483485 CFTRP13569 1480 aa11.76□□□□□ -0.53
SNX5-211ENST00000483485 CC2D2AQ9P2K1 1620 aa11.75□□□□□ -0.53
SNX5-211ENST00000483485 CEP162Q5TB80 1403 aa11.75□□□□□ -0.53
SNX5-211ENST00000483485 GOLGA3Q08378 1498 aa11.75□□□□□ -0.53
SNX5-211ENST00000483485 BCL11AQ9H165 835 aa11.74□□□□□ -0.53
SNX5-211ENST00000483485 PRDM2Q13029 1718 aa11.73□□□□□ -0.53
SNX5-211ENST00000483485 UBTFP17480 764 aaKnown RBP11.72□□□□□ -0.53
SNX5-211ENST00000483485 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
SNX5-211ENST00000483485 KIF21BO75037 1637 aa11.72□□□□□ -0.53
SNX5-211ENST00000483485 CEP164Q9UPV0 1460 aa11.71□□□□□ -0.53
SNX5-211ENST00000483485 CUX1P39880 1505 aa11.7□□□□□ -0.54
SNX5-211ENST00000483485 APLP2Q06481 763 aa11.69□□□□□ -0.54
SNX5-211ENST00000483485 PPARGC1BQ86YN6 1023 aaKnown RBP11.68□□□□□ -0.54
SNX5-211ENST00000483485 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
SNX5-211ENST00000483485 RAPGEF2Q9Y4G8 1499 aa11.64□□□□□ -0.55
SNX5-211ENST00000483485 SLC24A1O60721 1099 aa11.63□□□□□ -0.55
SNX5-211ENST00000483485 CLIP1P30622 1438 aa11.59□□□□□ -0.55
SNX5-211ENST00000483485 KIF27Q86VH2 1401 aa11.58□□□□□ -0.56
SNX5-211ENST00000483485 PRXQ9BXM0 1461 aa11.58□□□□□ -0.56
SNX5-211ENST00000483485 ERICH3Q5RHP9 1530 aa11.58□□□□□ -0.56
SNX5-211ENST00000483485 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
SNX5-211ENST00000483485 FGD5Q6ZNL6 1462 aa11.53□□□□□ -0.56
SNX5-211ENST00000483485 NESP48681 1621 aa11.52□□□□□ -0.57
SNX5-211ENST00000483485 VPS8Q8N3P4 1428 aa11.52□□□□□ -0.57
SNX5-211ENST00000483485 ZEB1P37275 1124 aaPredicted RBP11.51□□□□□ -0.57
SNX5-211ENST00000483485 CUX2O14529 1486 aa11.51□□□□□ -0.57
SNX5-211ENST00000483485 RANGAP1P46060 587 aaPredicted RBP11.49□□□□□ -0.57
SNX5-211ENST00000483485 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
SNX5-211ENST00000483485 LAMC3Q9Y6N6 1575 aa11.47□□□□□ -0.57
SNX5-211ENST00000483485 IGF1RP08069 1367 aa11.47□□□□□ -0.57
SNX5-211ENST00000483485 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
SNX5-211ENST00000483485 ARAP1Q96P48 1450 aa11.44□□□□□ -0.58
SNX5-211ENST00000483485 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
SNX5-211ENST00000483485 POLA1P09884 1462 aaPredicted RBP11.43□□□□□ -0.58
SNX5-211ENST00000483485 RAD54L2Q9Y4B4 1467 aa11.42□□□□□ -0.58
SNX5-211ENST00000483485 CARMIL1Q5VZK9 1371 aa11.42□□□□□ -0.58
SNX5-211ENST00000483485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.41□□□□□ -0.58
SNX5-211ENST00000483485 ABCA10Q8WWZ4 1543 aa11.41□□□□□ -0.58
SNX5-211ENST00000483485 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
SNX5-211ENST00000483485 ARHGAP35Q9NRY4 1499 aa11.38□□□□□ -0.59
SNX5-211ENST00000483485 PDS5BQ9NTI5 1447 aa11.38□□□□□ -0.59
SNX5-211ENST00000483485 CCER1Q8TC90 406 aaPredicted RBP11.37□□□□□ -0.59
SNX5-211ENST00000483485 KIF21AQ7Z4S6 1674 aa11.37□□□□□ -0.59
SNX5-211ENST00000483485 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
SNX5-211ENST00000483485 CENPBP07199 599 aaPredicted RBP11.35□□□□□ -0.59
SNX5-211ENST00000483485 CUL7Q14999 1698 aa11.32□□□□□ -0.6
SNX5-211ENST00000483485 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms