RNA–Protein interactions for RNA: ENST00000482287.5

KPNA1-207, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 3

Gene KPNA1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-207ENST00000482287 AEBP2Q6ZN18 517 aaPredicted RBP17.58■□□□□ 0.4
KPNA1-207ENST00000482287 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
KPNA1-207ENST00000482287 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
KPNA1-207ENST00000482287 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
KPNA1-207ENST00000482287 NISCHQ9Y2I1 1504 aa14.55□□□□□ -0.08
KPNA1-207ENST00000482287 FOXD1Q16676 465 aa14.06□□□□□ -0.16
KPNA1-207ENST00000482287 MSH5O43196 834 aa13.28□□□□□ -0.28
KPNA1-207ENST00000482287 POTEDQ86YR6 584 aa13.21□□□□□ -0.29
KPNA1-207ENST00000482287 PLPPR3Q6T4P5 718 aa13.2□□□□□ -0.3
KPNA1-207ENST00000482287 PIAS4Q8N2W9 510 aaPredicted RBP13.12□□□□□ -0.31
KPNA1-207ENST00000482287 CCDC180Q9P1Z9 1646 aa13.04□□□□□ -0.32
KPNA1-207ENST00000482287 PPP6R1Q9UPN7 881 aa13□□□□□ -0.33
KPNA1-207ENST00000482287 ADRA2BP18089 450 aa12.98□□□□□ -0.33
KPNA1-207ENST00000482287 ABCC9O60706 1549 aa12.32□□□□□ -0.44
KPNA1-207ENST00000482287 ZCCHC6Q5VYS8 1495 aaKnown RBP12.22□□□□□ -0.45
KPNA1-207ENST00000482287 MYO15BQ96JP2 1530 aa12.21□□□□□ -0.45
KPNA1-207ENST00000482287 DCAF1Q9Y4B6 1507 aa12.18□□□□□ -0.46
KPNA1-207ENST00000482287 NACADO15069 1562 aa12.13□□□□□ -0.47
KPNA1-207ENST00000482287 RB1CC1Q8TDY2 1594 aa12.08□□□□□ -0.48
KPNA1-207ENST00000482287 SCAF1Q9H7N4 1312 aaKnown RBP11.98□□□□□ -0.49
KPNA1-207ENST00000482287 MAPK8IP2Q13387 824 aaPredicted RBP11.97□□□□□ -0.49
KPNA1-207ENST00000482287 DMRT2Q9Y5R5 561 aa11.93□□□□□ -0.5
KPNA1-207ENST00000482287 UNC13AQ9UPW8 1703 aa11.87□□□□□ -0.51
KPNA1-207ENST00000482287 SHROOM4Q9ULL8 1493 aa11.77□□□□□ -0.52
KPNA1-207ENST00000482287 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
KPNA1-207ENST00000482287 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
KPNA1-207ENST00000482287 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
KPNA1-207ENST00000482287 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
KPNA1-207ENST00000482287 CACNB1Q02641 598 aaPredicted RBP11.53□□□□□ -0.56
KPNA1-207ENST00000482287 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
KPNA1-207ENST00000482287 HOXD11P31277 338 aaPredicted RBP11.41□□□□□ -0.58
KPNA1-207ENST00000482287 EIF4G1Q04637 1599 aaKnown RBP11.39□□□□□ -0.59
KPNA1-207ENST00000482287 CNKSR2Q8WXI2 1034 aa11.37□□□□□ -0.59
KPNA1-207ENST00000482287 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
KPNA1-207ENST00000482287 BAZ1AQ9NRL2 1556 aaPredicted RBP11.3□□□□□ -0.6
KPNA1-207ENST00000482287 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
KPNA1-207ENST00000482287 SMARCA4P51532 1647 aa11.3□□□□□ -0.6
KPNA1-207ENST00000482287 PEG3Q9GZU2 1588 aa11.29□□□□□ -0.6
KPNA1-207ENST00000482287 RNF39Q9H2S5 420 aa11.28□□□□□ -0.6
KPNA1-207ENST00000482287 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.61
KPNA1-207ENST00000482287 CECR2Q9BXF3 1484 aa11.22□□□□□ -0.61
KPNA1-207ENST00000482287 HMGXB3Q12766 1538 aa11.2□□□□□ -0.62
KPNA1-207ENST00000482287 SMARCA2P51531 1590 aa11.19□□□□□ -0.62
KPNA1-207ENST00000482287 MROH2BQ7Z745 1585 aa11.16□□□□□ -0.62
KPNA1-207ENST00000482287 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
KPNA1-207ENST00000482287 NCAPD3P42695 1498 aa11.14□□□□□ -0.63
KPNA1-207ENST00000482287 ATAD2BQ9ULI0 1458 aa11.13□□□□□ -0.63
KPNA1-207ENST00000482287 NCBP3Q53F19 620 aaKnown RBP11.11□□□□□ -0.63
KPNA1-207ENST00000482287 DNAJC5BQ9UF47 199 aa11.09□□□□□ -0.63
KPNA1-207ENST00000482287 RSF1Q96T23 1441 aaPredicted RBP11.06□□□□□ -0.64
KPNA1-207ENST00000482287 WIZO95785 1651 aa11.05□□□□□ -0.64
KPNA1-207ENST00000482287 BAZ1BQ9UIG0 1483 aaKnown RBP11.03□□□□□ -0.64
KPNA1-207ENST00000482287 TOP2AP11388 1531 aaKnown RBP11.03□□□□□ -0.64
KPNA1-207ENST00000482287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.95□□□□□ -0.665e-6■■■□□ 18.6
KPNA1-207ENST00000482287 SLC24A1O60721 1099 aa10.94□□□□□ -0.66
KPNA1-207ENST00000482287 PRDM2Q13029 1718 aa10.88□□□□□ -0.67
KPNA1-207ENST00000482287 LAMC3Q9Y6N6 1575 aa10.88□□□□□ -0.67
KPNA1-207ENST00000482287 NPM3O75607 178 aaKnown RBP10.85□□□□□ -0.67
KPNA1-207ENST00000482287 CFTRP13569 1480 aa10.79□□□□□ -0.68
KPNA1-207ENST00000482287 CCDC88BA6NC98 1476 aa10.77□□□□□ -0.69
KPNA1-207ENST00000482287 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
KPNA1-207ENST00000482287 THOC2Q8NI27 1593 aaKnown RBP10.73□□□□□ -0.69
KPNA1-207ENST00000482287 NESP48681 1621 aa10.73□□□□□ -0.69
KPNA1-207ENST00000482287 KIF21AQ7Z4S6 1674 aa10.73□□□□□ -0.69
KPNA1-207ENST00000482287 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
KPNA1-207ENST00000482287 WDR62O43379 1518 aa10.66□□□□□ -0.7
KPNA1-207ENST00000482287 FANCD2Q9BXW9 1451 aa10.64□□□□□ -0.71
KPNA1-207ENST00000482287 CEP164Q9UPV0 1460 aa10.64□□□□□ -0.71
KPNA1-207ENST00000482287 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
KPNA1-207ENST00000482287 CUX2O14529 1486 aa10.61□□□□□ -0.71
KPNA1-207ENST00000482287 ERCC6Q03468 1493 aa10.61□□□□□ -0.71
KPNA1-207ENST00000482287 MRC2Q9UBG0 1479 aa10.61□□□□□ -0.71
KPNA1-207ENST00000482287 DNMBPQ6XZF7 1577 aa10.57□□□□□ -0.72
KPNA1-207ENST00000482287 CAPN15O75808 1086 aa10.57□□□□□ -0.72
KPNA1-207ENST00000482287 SUPT5HO00267 1087 aaKnown RBP10.56□□□□□ -0.72
KPNA1-207ENST00000482287 URB2Q14146 1524 aaKnown RBP10.55□□□□□ -0.72
KPNA1-207ENST00000482287 ABCC8Q09428 1581 aa10.54□□□□□ -0.72
KPNA1-207ENST00000482287 BIVM-ERCC5R4GMW8 1640 aa10.54□□□□□ -0.72
KPNA1-207ENST00000482287 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.73
KPNA1-207ENST00000482287 TOPBP1Q92547 1522 aa10.51□□□□□ -0.73
KPNA1-207ENST00000482287 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
KPNA1-207ENST00000482287 DSG3P32926 999 aa10.5□□□□□ -0.73
KPNA1-207ENST00000482287 TOP2BQ02880 1626 aa10.5□□□□□ -0.73
KPNA1-207ENST00000482287 CUX1P39880 1505 aa10.49□□□□□ -0.73
KPNA1-207ENST00000482287 KCNA4P22459 653 aa10.48□□□□□ -0.73
KPNA1-207ENST00000482287 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
KPNA1-207ENST00000482287 SYNJ1O43426 1573 aa10.46□□□□□ -0.74
KPNA1-207ENST00000482287 POLA1P09884 1462 aaPredicted RBP10.44□□□□□ -0.74
KPNA1-207ENST00000482287 APLP2Q06481 763 aa10.42□□□□□ -0.74
KPNA1-207ENST00000482287 IFT140Q96RY7 1462 aa10.42□□□□□ -0.74
KPNA1-207ENST00000482287 WRNQ14191 1432 aaPredicted RBP eCLIP10.41□□□□□ -0.74
KPNA1-207ENST00000482287 FGD5Q6ZNL6 1462 aa10.41□□□□□ -0.74
KPNA1-207ENST00000482287 ABCA5Q8WWZ7 1642 aa10.4□□□□□ -0.75
KPNA1-207ENST00000482287 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
KPNA1-207ENST00000482287 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
KPNA1-207ENST00000482287 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
KPNA1-207ENST00000482287 TRHP20396 242 aaPredicted RBP10.36□□□□□ -0.75
KPNA1-207ENST00000482287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.35□□□□□ -0.75
KPNA1-207ENST00000482287 HNRNPUL2Q1KMD3 747 aaKnown RBP10.35□□□□□ -0.75
KPNA1-207ENST00000482287 POTEHQ6S545 545 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms