RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 POTEDQ86YR6 584 aa7.61□□□□□ -1.19
RAB3IP-206ENST00000481897 AEBP2Q6ZN18 517 aaPredicted RBP7.02□□□□□ -1.29
RAB3IP-206ENST00000481897 CHIC1Q5VXU3 224 aa7.01□□□□□ -1.29
RAB3IP-206ENST00000481897 NISCHQ9Y2I1 1504 aa6.73□□□□□ -1.33
RAB3IP-206ENST00000481897 SENP3Q9H4L4 574 aaPredicted RBP6.42□□□□□ -1.38
RAB3IP-206ENST00000481897 CCDC180Q9P1Z9 1646 aa6.2□□□□□ -1.42
RAB3IP-206ENST00000481897 PHF23Q9BUL5 403 aaPredicted RBP6.09□□□□□ -1.44
RAB3IP-206ENST00000481897 DNAJC5Q9H3Z4 198 aa6.06□□□□□ -1.44
RAB3IP-206ENST00000481897 MSH5O43196 834 aa5.87□□□□□ -1.47
RAB3IP-206ENST00000481897 MYO15BQ96JP2 1530 aa5.86□□□□□ -1.47
RAB3IP-206ENST00000481897 DCAF1Q9Y4B6 1507 aa5.8□□□□□ -1.48
RAB3IP-206ENST00000481897 NACADO15069 1562 aa5.72□□□□□ -1.49
RAB3IP-206ENST00000481897 ILDR1Q86SU0 546 aaPredicted RBP5.71□□□□□ -1.5
RAB3IP-206ENST00000481897 FOXD1Q16676 465 aa5.71□□□□□ -1.5
RAB3IP-206ENST00000481897 SHROOM4Q9ULL8 1493 aa5.69□□□□□ -1.5
RAB3IP-206ENST00000481897 ZCCHC6Q5VYS8 1495 aaKnown RBP5.67□□□□□ -1.5
RAB3IP-206ENST00000481897 RB1CC1Q8TDY2 1594 aa5.66□□□□□ -1.5
RAB3IP-206ENST00000481897 POTEHQ6S545 545 aa5.66□□□□□ -1.5
RAB3IP-206ENST00000481897 ABCC9O60706 1549 aa5.53□□□□□ -1.52
RAB3IP-206ENST00000481897 PLPPR3Q6T4P5 718 aa5.51□□□□□ -1.53
RAB3IP-206ENST00000481897 UNC13AQ9UPW8 1703 aa5.48□□□□□ -1.53
RAB3IP-206ENST00000481897 BICRAQ9NZM4 1560 aa5.4□□□□□ -1.55
RAB3IP-206ENST00000481897 PEG3Q9GZU2 1588 aa5.32□□□□□ -1.56
RAB3IP-206ENST00000481897 IGSF5Q9NSI5 407 aa5.31□□□□□ -1.56
RAB3IP-206ENST00000481897 SMARCA2P51531 1590 aa5.31□□□□□ -1.56
RAB3IP-206ENST00000481897 SCRIBQ14160 1630 aa5.3□□□□□ -1.56
RAB3IP-206ENST00000481897 PIAS4Q8N2W9 510 aaPredicted RBP5.3□□□□□ -1.56
RAB3IP-206ENST00000481897 BAZ1AQ9NRL2 1556 aaPredicted RBP5.27□□□□□ -1.57
RAB3IP-206ENST00000481897 HMGXB3Q12766 1538 aa5.27□□□□□ -1.57
RAB3IP-206ENST00000481897 EIF4G1Q04637 1599 aaKnown RBP5.24□□□□□ -1.57
RAB3IP-206ENST00000481897 SMARCA4P51532 1647 aa5.23□□□□□ -1.57
RAB3IP-206ENST00000481897 NCAPD3P42695 1498 aa5.2□□□□□ -1.58
RAB3IP-206ENST00000481897 CACNB1Q02641 598 aaPredicted RBP5.18□□□□□ -1.58
RAB3IP-206ENST00000481897 SCAF1Q9H7N4 1312 aaKnown RBP5.18□□□□□ -1.58
RAB3IP-206ENST00000481897 PRDM2Q13029 1718 aa5.17□□□□□ -1.58
RAB3IP-206ENST00000481897 PLSCR2Q9NRY7 297 aa5.17□□□□□ -1.58
RAB3IP-206ENST00000481897 CC2D2AQ9P2K1 1620 aa5.17□□□□□ -1.58
RAB3IP-206ENST00000481897 SOCS7O14512 581 aa5.16□□□□□ -1.58
RAB3IP-206ENST00000481897 TOP2AP11388 1531 aaKnown RBP5.13□□□□□ -1.59
RAB3IP-206ENST00000481897 DNAJC5BQ9UF47 199 aa5.13□□□□□ -1.59
RAB3IP-206ENST00000481897 ATAD2BQ9ULI0 1458 aa5.12□□□□□ -1.59
RAB3IP-206ENST00000481897 PCDH10Q9P2E7 1040 aa5.11□□□□□ -1.59
RAB3IP-206ENST00000481897 LAMC3Q9Y6N6 1575 aa5.11□□□□□ -1.59
RAB3IP-206ENST00000481897 BAZ1BQ9UIG0 1483 aaKnown RBP5.08□□□□□ -1.6
RAB3IP-206ENST00000481897 WDR97A6NE52 1622 aa5.08□□□□□ -1.6
RAB3IP-206ENST00000481897 CECR2Q9BXF3 1484 aa5.08□□□□□ -1.6
RAB3IP-206ENST00000481897 DCAF8L2P0C7V8 631 aa5.07□□□□□ -1.6
RAB3IP-206ENST00000481897 MROH2BQ7Z745 1585 aa5.07□□□□□ -1.6
RAB3IP-206ENST00000481897 RSF1Q96T23 1441 aaPredicted RBP5.05□□□□□ -1.6
RAB3IP-206ENST00000481897 DMRT2Q9Y5R5 561 aa5.05□□□□□ -1.6
RAB3IP-206ENST00000481897 ADRA2BP18089 450 aa5.05□□□□□ -1.6
RAB3IP-206ENST00000481897 PPP6R1Q9UPN7 881 aa5.04□□□□□ -1.6
RAB3IP-206ENST00000481897 WIZO95785 1651 aa5.02□□□□□ -1.61
RAB3IP-206ENST00000481897 ABCC8Q09428 1581 aa5.02□□□□□ -1.61
RAB3IP-206ENST00000481897 PABPN1Q86U42 306 aaKnown RBP eCLIP5.01□□□□□ -1.61
RAB3IP-206ENST00000481897 CUX2O14529 1486 aa5□□□□□ -1.61
RAB3IP-206ENST00000481897 CFTRP13569 1480 aa5□□□□□ -1.61
RAB3IP-206ENST00000481897 PDS5BQ9NTI5 1447 aa4.97□□□□□ -1.61
RAB3IP-206ENST00000481897 WDR62O43379 1518 aa4.97□□□□□ -1.61
RAB3IP-206ENST00000481897 THOC2Q8NI27 1593 aaKnown RBP4.96□□□□□ -1.61
RAB3IP-206ENST00000481897 CADPSQ9ULU8 1353 aa4.95□□□□□ -1.62
RAB3IP-206ENST00000481897 BIVM-ERCC5R4GMW8 1640 aa4.93□□□□□ -1.62
RAB3IP-206ENST00000481897 DNMBPQ6XZF7 1577 aa4.93□□□□□ -1.62
RAB3IP-206ENST00000481897 MRC2Q9UBG0 1479 aa4.93□□□□□ -1.62
RAB3IP-206ENST00000481897 CCDC88BA6NC98 1476 aa4.92□□□□□ -1.62
RAB3IP-206ENST00000481897 KIF21AQ7Z4S6 1674 aa4.92□□□□□ -1.62
RAB3IP-206ENST00000481897 CEP164Q9UPV0 1460 aa4.91□□□□□ -1.62
RAB3IP-206ENST00000481897 LMTK3Q96Q04 1460 aa4.88□□□□□ -1.63
RAB3IP-206ENST00000481897 FANCD2Q9BXW9 1451 aa4.88□□□□□ -1.63
RAB3IP-206ENST00000481897 TOP2BQ02880 1626 aa4.88□□□□□ -1.63
RAB3IP-206ENST00000481897 IFT140Q96RY7 1462 aa4.87□□□□□ -1.63
RAB3IP-206ENST00000481897 HOXD11P31277 338 aaPredicted RBP4.86□□□□□ -1.63
RAB3IP-206ENST00000481897 ERCC6Q03468 1493 aa4.84□□□□□ -1.63
RAB3IP-206ENST00000481897 TARBP1Q13395 1621 aaKnown RBP4.84□□□□□ -1.63
RAB3IP-206ENST00000481897 TOPBP1Q92547 1522 aa4.83□□□□□ -1.64
RAB3IP-206ENST00000481897 ERCC6L2Q5T890 1561 aa4.83□□□□□ -1.64
RAB3IP-206ENST00000481897 CUL7Q14999 1698 aa4.83□□□□□ -1.64
RAB3IP-206ENST00000481897 ABCA5Q8WWZ7 1642 aa4.83□□□□□ -1.64
RAB3IP-206ENST00000481897 C1QBPQ07021 282 aaKnown RBP4.82□□□□□ -1.64
RAB3IP-206ENST00000481897 ABCA10Q8WWZ4 1543 aa4.82□□□□□ -1.64
RAB3IP-206ENST00000481897 IFFO2Q5TF58 517 aa4.82□□□□□ -1.64
RAB3IP-206ENST00000481897 URB2Q14146 1524 aaKnown RBP4.82□□□□□ -1.64
RAB3IP-206ENST00000481897 ERICH3Q5RHP9 1530 aa4.82□□□□□ -1.64
RAB3IP-206ENST00000481897 EEA1Q15075 1411 aa4.81□□□□□ -1.64
RAB3IP-206ENST00000481897 RNF216Q9NWF9 866 aaPredicted RBP4.8□□□□□ -1.64
RAB3IP-206ENST00000481897 PBRM1Q86U86 1689 aa4.8□□□□□ -1.64
RAB3IP-206ENST00000481897 MAGI1Q96QZ7 1491 aaPredicted RBP4.8□□□□□ -1.64
RAB3IP-206ENST00000481897 CUX1P39880 1505 aa4.79□□□□□ -1.64
RAB3IP-206ENST00000481897 NESP48681 1621 aa4.79□□□□□ -1.64
RAB3IP-206ENST00000481897 CNKSR2Q8WXI2 1034 aa4.79□□□□□ -1.64
RAB3IP-206ENST00000481897 EIF4G3O43432 1585 aaKnown RBP4.78□□□□□ -1.64
RAB3IP-206ENST00000481897 WRNQ14191 1432 aaPredicted RBP eCLIP4.77□□□□□ -1.65
RAB3IP-206ENST00000481897 POLA1P09884 1462 aaPredicted RBP4.77□□□□□ -1.65
RAB3IP-206ENST00000481897 SLC34A2O95436 690 aa4.77□□□□□ -1.65
RAB3IP-206ENST00000481897 SYNJ1O43426 1573 aa4.76□□□□□ -1.65
RAB3IP-206ENST00000481897 ADAMTS12P58397 1594 aa4.76□□□□□ -1.65
RAB3IP-206ENST00000481897 FGD5Q6ZNL6 1462 aa4.75□□□□□ -1.65
RAB3IP-206ENST00000481897 GRIN2BQ13224 1484 aa4.75□□□□□ -1.65
RAB3IP-206ENST00000481897 NCBP3Q53F19 620 aaKnown RBP4.75□□□□□ -1.65
RAB3IP-206ENST00000481897 APLP2Q06481 763 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 438.9 ms