RNA–Protein interactions for RNA: ENST00000481515.1

SIMC1-207, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 3

Gene SIMC1, Length 896 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-207ENST00000481515 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
SIMC1-207ENST00000481515 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
SIMC1-207ENST00000481515 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
SIMC1-207ENST00000481515 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
SIMC1-207ENST00000481515 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
SIMC1-207ENST00000481515 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
SIMC1-207ENST00000481515 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
SIMC1-207ENST00000481515 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
SIMC1-207ENST00000481515 DCAF8L2P0C7V8 631 aa15.87■□□□□ 0.13
SIMC1-207ENST00000481515 MYO15BQ96JP2 1530 aa15.73■□□□□ 0.11
SIMC1-207ENST00000481515 SHROOM4Q9ULL8 1493 aa15.68■□□□□ 0.1
SIMC1-207ENST00000481515 ABCC9O60706 1549 aa15.6■□□□□ 0.09
SIMC1-207ENST00000481515 NACADO15069 1562 aa15.57■□□□□ 0.08
SIMC1-207ENST00000481515 FOXD1Q16676 465 aa15.53■□□□□ 0.08
SIMC1-207ENST00000481515 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
SIMC1-207ENST00000481515 SCRIBQ14160 1630 aa15.29■□□□□ 0.04
SIMC1-207ENST00000481515 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
SIMC1-207ENST00000481515 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
SIMC1-207ENST00000481515 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
SIMC1-207ENST00000481515 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
SIMC1-207ENST00000481515 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
SIMC1-207ENST00000481515 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
SIMC1-207ENST00000481515 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.04
SIMC1-207ENST00000481515 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.05
SIMC1-207ENST00000481515 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
SIMC1-207ENST00000481515 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
SIMC1-207ENST00000481515 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
SIMC1-207ENST00000481515 WIZO95785 1651 aa14.63□□□□□ -0.07
SIMC1-207ENST00000481515 ADRA2BP18089 450 aa14.62□□□□□ -0.07
SIMC1-207ENST00000481515 TOP2AP11388 1531 aaKnown RBP14.57□□□□□ -0.08
SIMC1-207ENST00000481515 PEG3Q9GZU2 1588 aa14.55□□□□□ -0.08
SIMC1-207ENST00000481515 PIAS4Q8N2W9 510 aaPredicted RBP14.54□□□□□ -0.08
SIMC1-207ENST00000481515 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
SIMC1-207ENST00000481515 MSH5O43196 834 aa14.46□□□□□ -0.09
SIMC1-207ENST00000481515 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
SIMC1-207ENST00000481515 CCDC88BA6NC98 1476 aa14.42□□□□□ -0.1
SIMC1-207ENST00000481515 BAZ1BQ9UIG0 1483 aaKnown RBP14.42□□□□□ -0.1
SIMC1-207ENST00000481515 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
SIMC1-207ENST00000481515 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
SIMC1-207ENST00000481515 NCAPD3P42695 1498 aa14.35□□□□□ -0.11
SIMC1-207ENST00000481515 HMGXB3Q12766 1538 aa14.32□□□□□ -0.12
SIMC1-207ENST00000481515 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
SIMC1-207ENST00000481515 WRNQ14191 1432 aaPredicted RBP eCLIP14.09□□□□□ -0.15
SIMC1-207ENST00000481515 EEA1Q15075 1411 aa14.08□□□□□ -0.15
SIMC1-207ENST00000481515 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
SIMC1-207ENST00000481515 LOC105371045A0A1W2PR82 267 aa14.05□□□□□ -0.16
SIMC1-207ENST00000481515 CFTRP13569 1480 aa14.05□□□□□ -0.16
SIMC1-207ENST00000481515 FAM9AQ8IZU1 332 aaPredicted RBP14.04□□□□□ -0.16
SIMC1-207ENST00000481515 CADPSQ9ULU8 1353 aa14□□□□□ -0.17
SIMC1-207ENST00000481515 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
SIMC1-207ENST00000481515 TOP2BQ02880 1626 aa13.93□□□□□ -0.18
SIMC1-207ENST00000481515 PRDM2Q13029 1718 aa13.93□□□□□ -0.18
SIMC1-207ENST00000481515 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
SIMC1-207ENST00000481515 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.19
SIMC1-207ENST00000481515 SOGA1O94964 1423 aa13.89□□□□□ -0.19
SIMC1-207ENST00000481515 LAMC3Q9Y6N6 1575 aa13.84□□□□□ -0.19
SIMC1-207ENST00000481515 FANCD2Q9BXW9 1451 aa13.81□□□□□ -0.2
SIMC1-207ENST00000481515 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
SIMC1-207ENST00000481515 CUX1P39880 1505 aa13.81□□□□□ -0.2
SIMC1-207ENST00000481515 GOLGA3Q08378 1498 aa13.8□□□□□ -0.2
SIMC1-207ENST00000481515 TNIKQ9UKE5 1360 aa13.8□□□□□ -0.2
SIMC1-207ENST00000481515 PDS5BQ9NTI5 1447 aa13.8□□□□□ -0.2
SIMC1-207ENST00000481515 KIF27Q86VH2 1401 aa13.79□□□□□ -0.2
SIMC1-207ENST00000481515 UBTFP17480 764 aaKnown RBP13.78□□□□□ -0.2
SIMC1-207ENST00000481515 EHMT2Q96KQ7 1210 aa13.77□□□□□ -0.21
SIMC1-207ENST00000481515 KIF21BO75037 1637 aa13.76□□□□□ -0.21
SIMC1-207ENST00000481515 RUSC2Q8N2Y8 1516 aa13.76□□□□□ -0.21
SIMC1-207ENST00000481515 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
SIMC1-207ENST00000481515 DNMBPQ6XZF7 1577 aa13.71□□□□□ -0.21
SIMC1-207ENST00000481515 TRIM26Q12899 539 aaPredicted RBP13.69□□□□□ -0.22
SIMC1-207ENST00000481515 NESP48681 1621 aa13.68□□□□□ -0.22
SIMC1-207ENST00000481515 CEP162Q5TB80 1403 aa13.68□□□□□ -0.22
SIMC1-207ENST00000481515 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
SIMC1-207ENST00000481515 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
SIMC1-207ENST00000481515 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
SIMC1-207ENST00000481515 CUX2O14529 1486 aa13.64□□□□□ -0.23
SIMC1-207ENST00000481515 PRXQ9BXM0 1461 aa13.64□□□□□ -0.23
SIMC1-207ENST00000481515 PCGF6Q9BYE7 350 aa13.62□□□□□ -0.23
SIMC1-207ENST00000481515 RAPGEF2Q9Y4G8 1499 aa13.61□□□□□ -0.23
SIMC1-207ENST00000481515 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
SIMC1-207ENST00000481515 POLA1P09884 1462 aaPredicted RBP13.59□□□□□ -0.23
SIMC1-207ENST00000481515 IGF1RP08069 1367 aa13.58□□□□□ -0.23
SIMC1-207ENST00000481515 CLIP1P30622 1438 aa13.58□□□□□ -0.24
SIMC1-207ENST00000481515 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
SIMC1-207ENST00000481515 URB2Q14146 1524 aaKnown RBP13.57□□□□□ -0.24
SIMC1-207ENST00000481515 CARMIL1Q5VZK9 1371 aa13.56□□□□□ -0.24
SIMC1-207ENST00000481515 MRC2Q9UBG0 1479 aa13.54□□□□□ -0.24
SIMC1-207ENST00000481515 APLP2Q06481 763 aa13.52□□□□□ -0.25
SIMC1-207ENST00000481515 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
SIMC1-207ENST00000481515 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
SIMC1-207ENST00000481515 CUL7Q14999 1698 aa13.49□□□□□ -0.25
SIMC1-207ENST00000481515 VPS8Q8N3P4 1428 aa13.47□□□□□ -0.25
SIMC1-207ENST00000481515 ERCC6Q03468 1493 aa13.47□□□□□ -0.25
SIMC1-207ENST00000481515 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.25
SIMC1-207ENST00000481515 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
SIMC1-207ENST00000481515 WDR62O43379 1518 aa13.43□□□□□ -0.26
SIMC1-207ENST00000481515 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
SIMC1-207ENST00000481515 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
SIMC1-207ENST00000481515 TDRD9Q8NDG6 1382 aaKnown RBP13.41□□□□□ -0.26
SIMC1-207ENST00000481515 TARBP1Q13395 1621 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms