RNA–Protein interactions for RNA: ENST00000481475.1

TNC-207, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-207ENST00000481475 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
TNC-207ENST00000481475 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
TNC-207ENST00000481475 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
TNC-207ENST00000481475 ABCC9O60706 1549 aa17.01■□□□□ 0.31
TNC-207ENST00000481475 NISCHQ9Y2I1 1504 aa16.88■□□□□ 0.29
TNC-207ENST00000481475 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
TNC-207ENST00000481475 PHF23Q9BUL5 403 aaPredicted RBP15.78■□□□□ 0.12
TNC-207ENST00000481475 CCDC180Q9P1Z9 1646 aa15.74■□□□□ 0.11
TNC-207ENST00000481475 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
TNC-207ENST00000481475 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
TNC-207ENST00000481475 CECR2Q9BXF3 1484 aa15.46■□□□□ 0.07
TNC-207ENST00000481475 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
TNC-207ENST00000481475 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
TNC-207ENST00000481475 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
TNC-207ENST00000481475 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
TNC-207ENST00000481475 CUX2O14529 1486 aa15.22■□□□□ 0.03
TNC-207ENST00000481475 NACADO15069 1562 aa15.18■□□□□ 0.02
TNC-207ENST00000481475 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
TNC-207ENST00000481475 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
TNC-207ENST00000481475 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
TNC-207ENST00000481475 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
TNC-207ENST00000481475 ERCC6Q03468 1493 aa14.73□□□□□ -0.05
TNC-207ENST00000481475 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
TNC-207ENST00000481475 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
TNC-207ENST00000481475 ILDR1Q86SU0 546 aaPredicted RBP14.53□□□□□ -0.08
TNC-207ENST00000481475 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
TNC-207ENST00000481475 SCRIBQ14160 1630 aa14.29□□□□□ -0.12
TNC-207ENST00000481475 RIMBP3CA6NJZ7 1639 aa14.28□□□□□ -0.12
TNC-207ENST00000481475 RIMBP3BA6NNM3 1639 aa14.28□□□□□ -0.12
TNC-207ENST00000481475 RIMBP3Q9UFD9 1639 aa14.28□□□□□ -0.12
TNC-207ENST00000481475 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
TNC-207ENST00000481475 NESP48681 1621 aa14.26□□□□□ -0.13
TNC-207ENST00000481475 OSCARQ8IYS5 282 aa14.21□□□□□ -0.13
TNC-207ENST00000481475 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
TNC-207ENST00000481475 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
TNC-207ENST00000481475 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
TNC-207ENST00000481475 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
TNC-207ENST00000481475 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
TNC-207ENST00000481475 CYB5RLQ6IPT4 315 aa13.97□□□□□ -0.17
TNC-207ENST00000481475 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
TNC-207ENST00000481475 WDR62O43379 1518 aa13.9□□□□□ -0.18
TNC-207ENST00000481475 ARAP1Q96P48 1450 aa13.88□□□□□ -0.19
TNC-207ENST00000481475 DCAF1Q9Y4B6 1507 aa13.88□□□□□ -0.19
TNC-207ENST00000481475 MRC2Q9UBG0 1479 aa13.85□□□□□ -0.19
TNC-207ENST00000481475 PDS5BQ9NTI5 1447 aa13.84□□□□□ -0.19
TNC-207ENST00000481475 HMGXB3Q12766 1538 aa13.83□□□□□ -0.2
TNC-207ENST00000481475 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
TNC-207ENST00000481475 FOXD1Q16676 465 aa13.81□□□□□ -0.2
TNC-207ENST00000481475 ADRA2BP18089 450 aa13.79□□□□□ -0.2
TNC-207ENST00000481475 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
TNC-207ENST00000481475 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
TNC-207ENST00000481475 LMTK3Q96Q04 1460 aa13.68□□□□□ -0.22
TNC-207ENST00000481475 SOCS7O14512 581 aa13.64□□□□□ -0.23
TNC-207ENST00000481475 KDM4FA0A1W2PPD8 638 aa13.62□□□□□ -0.23
TNC-207ENST00000481475 FBXO41Q8TF61 875 aa13.59□□□□□ -0.23
TNC-207ENST00000481475 ERCC6L2Q5T890 1561 aa13.58□□□□□ -0.24
TNC-207ENST00000481475 RSF1Q96T23 1441 aaPredicted RBP13.57□□□□□ -0.24
TNC-207ENST00000481475 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
TNC-207ENST00000481475 ILDR2Q71H61 639 aa13.52□□□□□ -0.25
TNC-207ENST00000481475 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
TNC-207ENST00000481475 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
TNC-207ENST00000481475 CEP164Q9UPV0 1460 aa13.5□□□□□ -0.25
TNC-207ENST00000481475 KCNA4P22459 653 aa13.48□□□□□ -0.25
TNC-207ENST00000481475 HECW2Q9P2P5 1572 aa13.46□□□□□ -0.25
TNC-207ENST00000481475 CHD1O14646 1710 aa13.44□□□□□ -0.26
TNC-207ENST00000481475 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
TNC-207ENST00000481475 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
TNC-207ENST00000481475 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
TNC-207ENST00000481475 FANCD2Q9BXW9 1451 aa13.37□□□□□ -0.27
TNC-207ENST00000481475 EIF4G3O43432 1585 aaKnown RBP13.3□□□□□ -0.28
TNC-207ENST00000481475 KIF13AQ9H1H9 1805 aa13.29□□□□□ -0.28
TNC-207ENST00000481475 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
TNC-207ENST00000481475 DISP3Q9P2K9 1392 aa13.29□□□□□ -0.28
TNC-207ENST00000481475 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
TNC-207ENST00000481475 SYNJ2O15056 1496 aa13.26□□□□□ -0.29
TNC-207ENST00000481475 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
TNC-207ENST00000481475 GAPVD1Q14C86 1478 aa13.21□□□□□ -0.3
TNC-207ENST00000481475 ADGRL1O94910 1474 aa13.19□□□□□ -0.3
TNC-207ENST00000481475 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
TNC-207ENST00000481475 FBLN2P98095 1184 aa13.18□□□□□ -0.3
TNC-207ENST00000481475 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
TNC-207ENST00000481475 KDM6BO15054 1643 aa13.14□□□□□ -0.31
TNC-207ENST00000481475 CFTRP13569 1480 aa13.12□□□□□ -0.31
TNC-207ENST00000481475 AQRO60306 1485 aaKnown RBP eCLIP13.1□□□□□ -0.31
TNC-207ENST00000481475 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
TNC-207ENST00000481475 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
TNC-207ENST00000481475 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
TNC-207ENST00000481475 SLC4A1APQ9BWU0 796 aaKnown RBP13.01□□□□□ -0.33
TNC-207ENST00000481475 MROH2BQ7Z745 1585 aa13.01□□□□□ -0.33
TNC-207ENST00000481475 TARBP1Q13395 1621 aaKnown RBP13.01□□□□□ -0.33
TNC-207ENST00000481475 ABCC10Q5T3U5 1492 aa13□□□□□ -0.33
TNC-207ENST00000481475 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
TNC-207ENST00000481475 FAM69CQ0P6D2 419 aa12.97□□□□□ -0.33
TNC-207ENST00000481475 DIP2BQ9P265 1576 aa12.96□□□□□ -0.33
TNC-207ENST00000481475 SNAPC4Q5SXM2 1469 aa12.95□□□□□ -0.34
TNC-207ENST00000481475 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
TNC-207ENST00000481475 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
TNC-207ENST00000481475 TSPOAP1O95153 1857 aa12.87□□□□□ -0.35
TNC-207ENST00000481475 MAGI1Q96QZ7 1491 aaPredicted RBP12.85□□□□□ -0.35
TNC-207ENST00000481475 MAPKBP1O60336 1514 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms