RNA–Protein interactions for RNA: ENST00000481107.1

TTC19-207, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 2

Gene TTC19, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-207ENST00000481107 NISCHQ9Y2I1 1504 aa16.06■□□□□ 0.16
TTC19-207ENST00000481107 SHROOM4Q9ULL8 1493 aa13.89□□□□□ -0.19
TTC19-207ENST00000481107 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
TTC19-207ENST00000481107 CCDC180Q9P1Z9 1646 aa13.62□□□□□ -0.23
TTC19-207ENST00000481107 ZCCHC6Q5VYS8 1495 aaKnown RBP13.51□□□□□ -0.25
TTC19-207ENST00000481107 SUPT5HO00267 1087 aaKnown RBP13.5□□□□□ -0.25
TTC19-207ENST00000481107 ABCC9O60706 1549 aa13.17□□□□□ -0.3
TTC19-207ENST00000481107 SCRIBQ14160 1630 aa13□□□□□ -0.33
TTC19-207ENST00000481107 DCAF1Q9Y4B6 1507 aa12.99□□□□□ -0.33
TTC19-207ENST00000481107 CHIC1Q5VXU3 224 aa12.84□□□□□ -0.35
TTC19-207ENST00000481107 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
TTC19-207ENST00000481107 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
TTC19-207ENST00000481107 NACADO15069 1562 aa12.69□□□□□ -0.38
TTC19-207ENST00000481107 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
TTC19-207ENST00000481107 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
TTC19-207ENST00000481107 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
TTC19-207ENST00000481107 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
TTC19-207ENST00000481107 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
TTC19-207ENST00000481107 MROH2BQ7Z745 1585 aa12.57□□□□□ -0.4
TTC19-207ENST00000481107 FAM9AQ8IZU1 332 aaPredicted RBP12.54□□□□□ -0.4
TTC19-207ENST00000481107 WIZO95785 1651 aa12.52□□□□□ -0.41
TTC19-207ENST00000481107 UNC13AQ9UPW8 1703 aa12.5□□□□□ -0.41
TTC19-207ENST00000481107 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
TTC19-207ENST00000481107 PCGF6Q9BYE7 350 aa12.33□□□□□ -0.44
TTC19-207ENST00000481107 BAZ1AQ9NRL2 1556 aaPredicted RBP12.32□□□□□ -0.44
TTC19-207ENST00000481107 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
TTC19-207ENST00000481107 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
TTC19-207ENST00000481107 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
TTC19-207ENST00000481107 ABCC8Q09428 1581 aa12.21□□□□□ -0.45
TTC19-207ENST00000481107 PPARGC1BQ86YN6 1023 aaKnown RBP12.2□□□□□ -0.46
TTC19-207ENST00000481107 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
TTC19-207ENST00000481107 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
TTC19-207ENST00000481107 TTBK1Q5TCY1 1321 aaPredicted RBP12.09□□□□□ -0.47
TTC19-207ENST00000481107 EIF4G1Q04637 1599 aaKnown RBP12.07□□□□□ -0.48
TTC19-207ENST00000481107 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
TTC19-207ENST00000481107 SOGA1O94964 1423 aa12.04□□□□□ -0.48
TTC19-207ENST00000481107 RUSC2Q8N2Y8 1516 aa12.03□□□□□ -0.48
TTC19-207ENST00000481107 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
TTC19-207ENST00000481107 RANGAP1P46060 587 aaPredicted RBP12□□□□□ -0.49
TTC19-207ENST00000481107 HRCP23327 699 aa11.99□□□□□ -0.49
TTC19-207ENST00000481107 TRIM26Q12899 539 aaPredicted RBP11.96□□□□□ -0.49
TTC19-207ENST00000481107 UBTFP17480 764 aaKnown RBP11.95□□□□□ -0.5
TTC19-207ENST00000481107 PEG3Q9GZU2 1588 aa11.94□□□□□ -0.5
TTC19-207ENST00000481107 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
TTC19-207ENST00000481107 CSRNP3Q8WYN3 585 aa11.9□□□□□ -0.5
TTC19-207ENST00000481107 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
TTC19-207ENST00000481107 CEP162Q5TB80 1403 aa11.8□□□□□ -0.52
TTC19-207ENST00000481107 DNAJC5BQ9UF47 199 aa11.8□□□□□ -0.52
TTC19-207ENST00000481107 NCAPD3P42695 1498 aa11.79□□□□□ -0.52
TTC19-207ENST00000481107 CC2D2AQ9P2K1 1620 aa11.74□□□□□ -0.53
TTC19-207ENST00000481107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
TTC19-207ENST00000481107 HMGXB3Q12766 1538 aa11.72□□□□□ -0.53
TTC19-207ENST00000481107 RAPGEF2Q9Y4G8 1499 aa11.72□□□□□ -0.53
TTC19-207ENST00000481107 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
TTC19-207ENST00000481107 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
TTC19-207ENST00000481107 CUX1P39880 1505 aa11.69□□□□□ -0.54
TTC19-207ENST00000481107 TOP2BQ02880 1626 aa11.67□□□□□ -0.54
TTC19-207ENST00000481107 EEA1Q15075 1411 aa11.67□□□□□ -0.54
TTC19-207ENST00000481107 NESP48681 1621 aa11.66□□□□□ -0.54
TTC19-207ENST00000481107 CFTRP13569 1480 aa11.66□□□□□ -0.54
TTC19-207ENST00000481107 CEP164Q9UPV0 1460 aa11.64□□□□□ -0.55
TTC19-207ENST00000481107 CLIP1P30622 1438 aa11.63□□□□□ -0.55
TTC19-207ENST00000481107 CADPSQ9ULU8 1353 aa11.62□□□□□ -0.55
TTC19-207ENST00000481107 CCER1Q8TC90 406 aaPredicted RBP11.61□□□□□ -0.55
TTC19-207ENST00000481107 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
TTC19-207ENST00000481107 BIVM-ERCC5R4GMW8 1640 aa11.59□□□□□ -0.55
TTC19-207ENST00000481107 KIF21BO75037 1637 aa11.57□□□□□ -0.56
TTC19-207ENST00000481107 CUX2O14529 1486 aa11.57□□□□□ -0.56
TTC19-207ENST00000481107 P3H3Q8IVL6 736 aa11.56□□□□□ -0.56
TTC19-207ENST00000481107 APLP2Q06481 763 aa11.55□□□□□ -0.56
TTC19-207ENST00000481107 KIF27Q86VH2 1401 aa11.55□□□□□ -0.56
TTC19-207ENST00000481107 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
TTC19-207ENST00000481107 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
TTC19-207ENST00000481107 RAD54L2Q9Y4B4 1467 aa11.53□□□□□ -0.56
TTC19-207ENST00000481107 PRXQ9BXM0 1461 aa11.51□□□□□ -0.57
TTC19-207ENST00000481107 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
TTC19-207ENST00000481107 ATP1B4Q9UN42 357 aaPredicted RBP11.5□□□□□ -0.57
TTC19-207ENST00000481107 IGF1RP08069 1367 aa11.49□□□□□ -0.57
TTC19-207ENST00000481107 VPS8Q8N3P4 1428 aa11.49□□□□□ -0.57
TTC19-207ENST00000481107 PRDM2Q13029 1718 aa11.48□□□□□ -0.57
TTC19-207ENST00000481107 ITGAEP38570 1179 aa11.46□□□□□ -0.57
TTC19-207ENST00000481107 ARAP1Q96P48 1450 aa11.46□□□□□ -0.57
TTC19-207ENST00000481107 ZEB1P37275 1124 aaPredicted RBP11.46□□□□□ -0.57
TTC19-207ENST00000481107 CARMIL1Q5VZK9 1371 aa11.45□□□□□ -0.58
TTC19-207ENST00000481107 TDRD9Q8NDG6 1382 aaKnown RBP11.44□□□□□ -0.58
TTC19-207ENST00000481107 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
TTC19-207ENST00000481107 TOPBP1Q92547 1522 aa11.42□□□□□ -0.58
TTC19-207ENST00000481107 ERICH3Q5RHP9 1530 aa11.41□□□□□ -0.58
TTC19-207ENST00000481107 ARHGAP35Q9NRY4 1499 aa11.4□□□□□ -0.58
TTC19-207ENST00000481107 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
TTC19-207ENST00000481107 KIF21AQ7Z4S6 1674 aa11.36□□□□□ -0.59
TTC19-207ENST00000481107 DNMBPQ6XZF7 1577 aa11.36□□□□□ -0.59
TTC19-207ENST00000481107 ARID3CA6NKF2 412 aa11.34□□□□□ -0.59
TTC19-207ENST00000481107 FHOD3Q2V2M9 1422 aa11.32□□□□□ -0.6
TTC19-207ENST00000481107 LAMC3Q9Y6N6 1575 aa11.31□□□□□ -0.6
TTC19-207ENST00000481107 PDS5BQ9NTI5 1447 aa11.31□□□□□ -0.6
TTC19-207ENST00000481107 ABCA10Q8WWZ4 1543 aa11.3□□□□□ -0.6
TTC19-207ENST00000481107 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
TTC19-207ENST00000481107 FAM50AQ14320 339 aaKnown RBP11.27□□□□□ -0.6
TTC19-207ENST00000481107 GAPVD1Q14C86 1478 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms