RNA–Protein interactions for RNA: ENST00000480957.6

AMT-215, Transcript of aminomethyltransferase, humanhuman

TSL 4

Gene AMT, Length 3,243 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-215ENST00000480957 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
AMT-215ENST00000480957 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
AMT-215ENST00000480957 ZCCHC6Q5VYS8 1495 aaKnown RBP23.9■■□□□ 1.42
AMT-215ENST00000480957 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
AMT-215ENST00000480957 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
AMT-215ENST00000480957 ABCC9O60706 1549 aa23.25■■□□□ 1.31
AMT-215ENST00000480957 MYO15BQ96JP2 1530 aa23.25■■□□□ 1.31
AMT-215ENST00000480957 SHROOM4Q9ULL8 1493 aa23.14■■□□□ 1.29
AMT-215ENST00000480957 NACADO15069 1562 aa23.04■■□□□ 1.28
AMT-215ENST00000480957 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
AMT-215ENST00000480957 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
AMT-215ENST00000480957 HRCP23327 699 aa22.41■■□□□ 1.18
AMT-215ENST00000480957 UNC13AQ9UPW8 1703 aa22.33■■□□□ 1.16
AMT-215ENST00000480957 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
AMT-215ENST00000480957 BICRAQ9NZM4 1560 aa22.13■■□□□ 1.13
AMT-215ENST00000480957 RSF1Q96T23 1441 aaPredicted RBP22.08■■□□□ 1.13
AMT-215ENST00000480957 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
AMT-215ENST00000480957 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.1
AMT-215ENST00000480957 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.13e-6■■■■□ 23.3
AMT-215ENST00000480957 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
AMT-215ENST00000480957 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
AMT-215ENST00000480957 WIZO95785 1651 aa21.75■■□□□ 1.07
AMT-215ENST00000480957 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
AMT-215ENST00000480957 PCGF6Q9BYE7 350 aa21.69■■□□□ 1.06
AMT-215ENST00000480957 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
AMT-215ENST00000480957 PELP1Q8IZL8 1130 aaKnown RBP21.68■■□□□ 1.06
AMT-215ENST00000480957 PEG3Q9GZU2 1588 aa21.59■■□□□ 1.05
AMT-215ENST00000480957 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
AMT-215ENST00000480957 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.02
AMT-215ENST00000480957 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
AMT-215ENST00000480957 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
AMT-215ENST00000480957 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
AMT-215ENST00000480957 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
AMT-215ENST00000480957 NCAPD3P42695 1498 aa21.28■■□□□ 1
AMT-215ENST00000480957 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
AMT-215ENST00000480957 TRIM26Q12899 539 aaPredicted RBP21.17■□□□□ 0.98
AMT-215ENST00000480957 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
AMT-215ENST00000480957 CC2D2AQ9P2K1 1620 aa21.08■□□□□ 0.96
AMT-215ENST00000480957 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
AMT-215ENST00000480957 TRIM41Q8WV44 630 aa21■□□□□ 0.95
AMT-215ENST00000480957 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
AMT-215ENST00000480957 MYT1Q01538 1121 aa20.87■□□□□ 0.93
AMT-215ENST00000480957 ABCC8Q09428 1581 aa20.87■□□□□ 0.93
AMT-215ENST00000480957 CFTRP13569 1480 aa20.81■□□□□ 0.92
AMT-215ENST00000480957 WRNQ14191 1432 aaPredicted RBP eCLIP20.76■□□□□ 0.91
AMT-215ENST00000480957 CADPSQ9ULU8 1353 aa20.71■□□□□ 0.91
AMT-215ENST00000480957 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
AMT-215ENST00000480957 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
AMT-215ENST00000480957 ACIN1Q9UKV3 1341 aaKnown RBP20.64■□□□□ 0.9
AMT-215ENST00000480957 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
AMT-215ENST00000480957 BIVM-ERCC5R4GMW8 1640 aa20.58■□□□□ 0.89
AMT-215ENST00000480957 FAM9AQ8IZU1 332 aaPredicted RBP20.57■□□□□ 0.88
AMT-215ENST00000480957 EEA1Q15075 1411 aa20.54■□□□□ 0.88
AMT-215ENST00000480957 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
AMT-215ENST00000480957 CUX1P39880 1505 aa20.52■□□□□ 0.88
AMT-215ENST00000480957 SOGA1O94964 1423 aa20.52■□□□□ 0.88
AMT-215ENST00000480957 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
AMT-215ENST00000480957 LAMC3Q9Y6N6 1575 aa20.51■□□□□ 0.87
AMT-215ENST00000480957 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
AMT-215ENST00000480957 NESP48681 1621 aa20.46■□□□□ 0.87
AMT-215ENST00000480957 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
AMT-215ENST00000480957 CSRNP3Q8WYN3 585 aa20.4■□□□□ 0.86
AMT-215ENST00000480957 GTF3C3Q9Y5Q9 886 aa20.36■□□□□ 0.85
AMT-215ENST00000480957 PDS5BQ9NTI5 1447 aa20.34■□□□□ 0.85
AMT-215ENST00000480957 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
AMT-215ENST00000480957 DNMBPQ6XZF7 1577 aa20.31■□□□□ 0.84
AMT-215ENST00000480957 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
AMT-215ENST00000480957 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
AMT-215ENST00000480957 KIF21BO75037 1637 aa20.26■□□□□ 0.83
AMT-215ENST00000480957 CENPBP07199 599 aaPredicted RBP20.25■□□□□ 0.83
AMT-215ENST00000480957 GOLGA3Q08378 1498 aa20.23■□□□□ 0.83
AMT-215ENST00000480957 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
AMT-215ENST00000480957 EHMT2Q96KQ7 1210 aa20.22■□□□□ 0.83
AMT-215ENST00000480957 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
AMT-215ENST00000480957 TNIKQ9UKE5 1360 aa20.21■□□□□ 0.83
AMT-215ENST00000480957 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
AMT-215ENST00000480957 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
AMT-215ENST00000480957 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
AMT-215ENST00000480957 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
AMT-215ENST00000480957 CUX2O14529 1486 aa20.14■□□□□ 0.81
AMT-215ENST00000480957 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
AMT-215ENST00000480957 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
AMT-215ENST00000480957 RAPGEF2Q9Y4G8 1499 aa20.1■□□□□ 0.81
AMT-215ENST00000480957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.09■□□□□ 0.81
AMT-215ENST00000480957 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
AMT-215ENST00000480957 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.8
AMT-215ENST00000480957 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
AMT-215ENST00000480957 IGF1RP08069 1367 aa20.07■□□□□ 0.8
AMT-215ENST00000480957 CEP162Q5TB80 1403 aa20.07■□□□□ 0.8
AMT-215ENST00000480957 WDR97A6NE52 1622 aa20.04■□□□□ 0.8
AMT-215ENST00000480957 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
AMT-215ENST00000480957 WDR62O43379 1518 aa19.98■□□□□ 0.79
AMT-215ENST00000480957 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
AMT-215ENST00000480957 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.78
AMT-215ENST00000480957 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
AMT-215ENST00000480957 ERCC6Q03468 1493 aa19.91■□□□□ 0.78
AMT-215ENST00000480957 CLIP1P30622 1438 aa19.89■□□□□ 0.78
AMT-215ENST00000480957 THOC2Q8NI27 1593 aaKnown RBP19.89■□□□□ 0.77
AMT-215ENST00000480957 CUL7Q14999 1698 aa19.89■□□□□ 0.77
AMT-215ENST00000480957 GAPVD1Q14C86 1478 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms