RNA–Protein interactions for RNA: ENST00000480523.1

SGSM1-205, Transcript of small G protein signaling modulator 1, humanhuman

TSL 2

Gene SGSM1, Length 3,694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM1-205ENST00000480523 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
SGSM1-205ENST00000480523 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
SGSM1-205ENST00000480523 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
SGSM1-205ENST00000480523 ZCCHC6Q5VYS8 1495 aaKnown RBP18.56■□□□□ 0.56
SGSM1-205ENST00000480523 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
SGSM1-205ENST00000480523 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
SGSM1-205ENST00000480523 DCAF1Q9Y4B6 1507 aa17.96■□□□□ 0.47
SGSM1-205ENST00000480523 ABCC9O60706 1549 aa17.68■□□□□ 0.42
SGSM1-205ENST00000480523 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
SGSM1-205ENST00000480523 CHIC1Q5VXU3 224 aa17.56■□□□□ 0.4
SGSM1-205ENST00000480523 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
SGSM1-205ENST00000480523 NACADO15069 1562 aa17.37■□□□□ 0.37
SGSM1-205ENST00000480523 RSF1Q96T23 1441 aaPredicted RBP17.36■□□□□ 0.37
SGSM1-205ENST00000480523 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.35
SGSM1-205ENST00000480523 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
SGSM1-205ENST00000480523 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
SGSM1-205ENST00000480523 LOC105371045A0A1W2PR82 267 aa17.11■□□□□ 0.33
SGSM1-205ENST00000480523 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
SGSM1-205ENST00000480523 WIZO95785 1651 aa17.06■□□□□ 0.32
SGSM1-205ENST00000480523 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
SGSM1-205ENST00000480523 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
SGSM1-205ENST00000480523 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
SGSM1-205ENST00000480523 BAZ1AQ9NRL2 1556 aaPredicted RBP16.87■□□□□ 0.29
SGSM1-205ENST00000480523 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
SGSM1-205ENST00000480523 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
SGSM1-205ENST00000480523 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
SGSM1-205ENST00000480523 MYT1Q01538 1121 aa16.8■□□□□ 0.28
SGSM1-205ENST00000480523 PCGF6Q9BYE7 350 aa16.8■□□□□ 0.28
SGSM1-205ENST00000480523 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
SGSM1-205ENST00000480523 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
SGSM1-205ENST00000480523 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
SGSM1-205ENST00000480523 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
SGSM1-205ENST00000480523 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
SGSM1-205ENST00000480523 ABCC8Q09428 1581 aa16.62■□□□□ 0.25
SGSM1-205ENST00000480523 HRCP23327 699 aa16.57■□□□□ 0.24
SGSM1-205ENST00000480523 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
SGSM1-205ENST00000480523 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
SGSM1-205ENST00000480523 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
SGSM1-205ENST00000480523 TRIM26Q12899 539 aaPredicted RBP16.43■□□□□ 0.22
SGSM1-205ENST00000480523 SOGA1O94964 1423 aa16.41■□□□□ 0.22
SGSM1-205ENST00000480523 RUSC2Q8N2Y8 1516 aa16.38■□□□□ 0.21
SGSM1-205ENST00000480523 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
SGSM1-205ENST00000480523 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.19
SGSM1-205ENST00000480523 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
SGSM1-205ENST00000480523 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
SGSM1-205ENST00000480523 TTBK1Q5TCY1 1321 aaPredicted RBP16.16■□□□□ 0.18
SGSM1-205ENST00000480523 CEP162Q5TB80 1403 aa16.15■□□□□ 0.18
SGSM1-205ENST00000480523 UBTFP17480 764 aaKnown RBP16.13■□□□□ 0.17
SGSM1-205ENST00000480523 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
SGSM1-205ENST00000480523 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
SGSM1-205ENST00000480523 EEA1Q15075 1411 aa16.08■□□□□ 0.16
SGSM1-205ENST00000480523 HMGXB3Q12766 1538 aa16.07■□□□□ 0.16
SGSM1-205ENST00000480523 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
SGSM1-205ENST00000480523 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
SGSM1-205ENST00000480523 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
SGSM1-205ENST00000480523 RANGAP1P46060 587 aaPredicted RBP15.98■□□□□ 0.15
SGSM1-205ENST00000480523 CUX1P39880 1505 aa15.97■□□□□ 0.15
SGSM1-205ENST00000480523 CEP164Q9UPV0 1460 aa15.96■□□□□ 0.15
SGSM1-205ENST00000480523 KIF21BO75037 1637 aa15.95■□□□□ 0.14
SGSM1-205ENST00000480523 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
SGSM1-205ENST00000480523 CFTRP13569 1480 aa15.95■□□□□ 0.14
SGSM1-205ENST00000480523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
SGSM1-205ENST00000480523 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
SGSM1-205ENST00000480523 CLIP1P30622 1438 aa15.88■□□□□ 0.13
SGSM1-205ENST00000480523 ZEB1P37275 1124 aaPredicted RBP15.83■□□□□ 0.12
SGSM1-205ENST00000480523 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
SGSM1-205ENST00000480523 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
SGSM1-205ENST00000480523 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
SGSM1-205ENST00000480523 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.11
SGSM1-205ENST00000480523 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.11
SGSM1-205ENST00000480523 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
SGSM1-205ENST00000480523 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
SGSM1-205ENST00000480523 PRKCSHP14314 528 aaPredicted RBP15.74■□□□□ 0.11
SGSM1-205ENST00000480523 NESP48681 1621 aa15.73■□□□□ 0.11
SGSM1-205ENST00000480523 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
SGSM1-205ENST00000480523 CUX2O14529 1486 aa15.7■□□□□ 0.1
SGSM1-205ENST00000480523 ARAP1Q96P48 1450 aa15.7■□□□□ 0.1
SGSM1-205ENST00000480523 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
SGSM1-205ENST00000480523 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
SGSM1-205ENST00000480523 IGF1RP08069 1367 aa15.67■□□□□ 0.1
SGSM1-205ENST00000480523 FANCD2Q9BXW9 1451 aa15.67■□□□□ 0.1
SGSM1-205ENST00000480523 SCAF1Q9H7N4 1312 aaKnown RBP15.65■□□□□ 0.1
SGSM1-205ENST00000480523 KANK4Q5T7N3 995 aaPredicted RBP15.64■□□□□ 0.09
SGSM1-205ENST00000480523 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
SGSM1-205ENST00000480523 APLP2Q06481 763 aa15.61■□□□□ 0.09
SGSM1-205ENST00000480523 ARHGAP35Q9NRY4 1499 aa15.6■□□□□ 0.09
SGSM1-205ENST00000480523 CARMIL1Q5VZK9 1371 aa15.57■□□□□ 0.08
SGSM1-205ENST00000480523 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
SGSM1-205ENST00000480523 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
SGSM1-205ENST00000480523 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
SGSM1-205ENST00000480523 DNMBPQ6XZF7 1577 aa15.52■□□□□ 0.08
SGSM1-205ENST00000480523 ERICH6Q7L0X2 663 aa15.5■□□□□ 0.07
SGSM1-205ENST00000480523 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
SGSM1-205ENST00000480523 P3H3Q8IVL6 736 aa15.5■□□□□ 0.07
SGSM1-205ENST00000480523 ABCA10Q8WWZ4 1543 aa15.46■□□□□ 0.07
SGSM1-205ENST00000480523 LAMC3Q9Y6N6 1575 aa15.43■□□□□ 0.06
SGSM1-205ENST00000480523 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
SGSM1-205ENST00000480523 KIF21AQ7Z4S6 1674 aa15.4■□□□□ 0.06
SGSM1-205ENST00000480523 ITGAEP38570 1179 aa15.38■□□□□ 0.05
SGSM1-205ENST00000480523 FHOD3Q2V2M9 1422 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms