RNA–Protein interactions for RNA: ENST00000480486.1

CHAF1B-202, Transcript of chromatin assembly factor 1 subunit B, humanhuman

TSL 3

Gene CHAF1B, Length 1,152 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1B-202ENST00000480486 AEBP2Q6ZN18 517 aaPredicted RBP29.93■■■□□ 2.38
CHAF1B-202ENST00000480486 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
CHAF1B-202ENST00000480486 NISCHQ9Y2I1 1504 aa27.94■■■□□ 2.06
CHAF1B-202ENST00000480486 PHF23Q9BUL5 403 aaPredicted RBP26.09■■□□□ 1.77
CHAF1B-202ENST00000480486 ABCC9O60706 1549 aa25.47■■□□□ 1.67
CHAF1B-202ENST00000480486 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
CHAF1B-202ENST00000480486 CCDC180Q9P1Z9 1646 aa25.3■■□□□ 1.64
CHAF1B-202ENST00000480486 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
CHAF1B-202ENST00000480486 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
CHAF1B-202ENST00000480486 DNAJC5BQ9UF47 199 aa24.16■■□□□ 1.46
CHAF1B-202ENST00000480486 NACADO15069 1562 aa23.95■■□□□ 1.43
CHAF1B-202ENST00000480486 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
CHAF1B-202ENST00000480486 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
CHAF1B-202ENST00000480486 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.36
CHAF1B-202ENST00000480486 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
CHAF1B-202ENST00000480486 DCAF8L2P0C7V8 631 aa23.49■■□□□ 1.35
CHAF1B-202ENST00000480486 FOXD1Q16676 465 aa23.45■■□□□ 1.34
CHAF1B-202ENST00000480486 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
CHAF1B-202ENST00000480486 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
CHAF1B-202ENST00000480486 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
CHAF1B-202ENST00000480486 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
CHAF1B-202ENST00000480486 CECR2Q9BXF3 1484 aa23.01■■□□□ 1.27
CHAF1B-202ENST00000480486 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
CHAF1B-202ENST00000480486 SCRIBQ14160 1630 aa22.92■■□□□ 1.26
CHAF1B-202ENST00000480486 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
CHAF1B-202ENST00000480486 ADRA2BP18089 450 aa22.87■■□□□ 1.25
CHAF1B-202ENST00000480486 DNAJC5Q9H3Z4 198 aa22.46■■□□□ 1.19
CHAF1B-202ENST00000480486 PIAS4Q8N2W9 510 aaPredicted RBP22.18■■□□□ 1.14
CHAF1B-202ENST00000480486 CUX2O14529 1486 aa22.17■■□□□ 1.14
CHAF1B-202ENST00000480486 NCAPD3P42695 1498 aa22.1■■□□□ 1.13
CHAF1B-202ENST00000480486 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
CHAF1B-202ENST00000480486 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
CHAF1B-202ENST00000480486 HMGXB3Q12766 1538 aa21.94■■□□□ 1.1
CHAF1B-202ENST00000480486 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
CHAF1B-202ENST00000480486 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
CHAF1B-202ENST00000480486 NESP48681 1621 aa21.8■■□□□ 1.08
CHAF1B-202ENST00000480486 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
CHAF1B-202ENST00000480486 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
CHAF1B-202ENST00000480486 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
CHAF1B-202ENST00000480486 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
CHAF1B-202ENST00000480486 LAMC3Q9Y6N6 1575 aa21.67■■□□□ 1.06
CHAF1B-202ENST00000480486 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
CHAF1B-202ENST00000480486 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
CHAF1B-202ENST00000480486 PDS5BQ9NTI5 1447 aa21.5■■□□□ 1.03
CHAF1B-202ENST00000480486 MSH5O43196 834 aa21.45■■□□□ 1.02
CHAF1B-202ENST00000480486 PPP4R3CPQ6ZMV5 832 aa21.38■■□□□ 1.01
CHAF1B-202ENST00000480486 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
CHAF1B-202ENST00000480486 WDR62O43379 1518 aa21.36■■□□□ 1.01
CHAF1B-202ENST00000480486 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
CHAF1B-202ENST00000480486 KCNA4P22459 653 aa21.34■■□□□ 1.01
CHAF1B-202ENST00000480486 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
CHAF1B-202ENST00000480486 WIZO95785 1651 aa21.22■□□□□ 0.99
CHAF1B-202ENST00000480486 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
CHAF1B-202ENST00000480486 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
CHAF1B-202ENST00000480486 CFTRP13569 1480 aa21.1■□□□□ 0.97
CHAF1B-202ENST00000480486 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
CHAF1B-202ENST00000480486 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
CHAF1B-202ENST00000480486 TOP2AP11388 1531 aaKnown RBP20.98■□□□□ 0.95
CHAF1B-202ENST00000480486 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
CHAF1B-202ENST00000480486 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
CHAF1B-202ENST00000480486 PRDM2Q13029 1718 aa20.92■□□□□ 0.94
CHAF1B-202ENST00000480486 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
CHAF1B-202ENST00000480486 RIMBP3CA6NJZ7 1639 aa20.84■□□□□ 0.93
CHAF1B-202ENST00000480486 RIMBP3BA6NNM3 1639 aa20.84■□□□□ 0.93
CHAF1B-202ENST00000480486 RIMBP3Q9UFD9 1639 aa20.84■□□□□ 0.93
CHAF1B-202ENST00000480486 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
CHAF1B-202ENST00000480486 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
CHAF1B-202ENST00000480486 ARHGEF11O15085 1522 aa20.74■□□□□ 0.91
CHAF1B-202ENST00000480486 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
CHAF1B-202ENST00000480486 CNKSR2Q8WXI2 1034 aa20.69■□□□□ 0.9
CHAF1B-202ENST00000480486 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
CHAF1B-202ENST00000480486 EIF4G3O43432 1585 aaKnown RBP20.68■□□□□ 0.9
CHAF1B-202ENST00000480486 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
CHAF1B-202ENST00000480486 NPM3O75607 178 aaKnown RBP20.64■□□□□ 0.89
CHAF1B-202ENST00000480486 MAPK8IP2Q13387 824 aaPredicted RBP20.64■□□□□ 0.89
CHAF1B-202ENST00000480486 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
CHAF1B-202ENST00000480486 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
CHAF1B-202ENST00000480486 CHD1O14646 1710 aa20.58■□□□□ 0.89
CHAF1B-202ENST00000480486 ARAP1Q96P48 1450 aa20.51■□□□□ 0.87
CHAF1B-202ENST00000480486 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
CHAF1B-202ENST00000480486 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
CHAF1B-202ENST00000480486 POLA1P09884 1462 aaPredicted RBP20.48■□□□□ 0.87
CHAF1B-202ENST00000480486 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
CHAF1B-202ENST00000480486 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
CHAF1B-202ENST00000480486 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
CHAF1B-202ENST00000480486 RAD54L2Q9Y4B4 1467 aa20.36■□□□□ 0.85
CHAF1B-202ENST00000480486 TRHP20396 242 aaPredicted RBP20.33■□□□□ 0.85
CHAF1B-202ENST00000480486 FBLN2P98095 1184 aa20.33■□□□□ 0.85
CHAF1B-202ENST00000480486 SOGA1O94964 1423 aa20.33■□□□□ 0.84
CHAF1B-202ENST00000480486 SNAPC4Q5SXM2 1469 aa20.32■□□□□ 0.84
CHAF1B-202ENST00000480486 TDRD9Q8NDG6 1382 aaKnown RBP20.31■□□□□ 0.84
CHAF1B-202ENST00000480486 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
CHAF1B-202ENST00000480486 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
CHAF1B-202ENST00000480486 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
CHAF1B-202ENST00000480486 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
CHAF1B-202ENST00000480486 EHMT2Q96KQ7 1210 aa20.24■□□□□ 0.83
CHAF1B-202ENST00000480486 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
CHAF1B-202ENST00000480486 CUX1P39880 1505 aa20.23■□□□□ 0.83
CHAF1B-202ENST00000480486 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
CHAF1B-202ENST00000480486 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms