RNA–Protein interactions for RNA: ENST00000480015.1

ZIC4-211, Transcript of Zic family member 4, humanhuman

TSL 4

Gene ZIC4, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-211ENST00000480015 NISCHQ9Y2I1 1504 aa19.58■□□□□ 0.73
ZIC4-211ENST00000480015 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
ZIC4-211ENST00000480015 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
ZIC4-211ENST00000480015 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.38
ZIC4-211ENST00000480015 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
ZIC4-211ENST00000480015 ABCC9O60706 1549 aa16.5■□□□□ 0.23
ZIC4-211ENST00000480015 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
ZIC4-211ENST00000480015 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
ZIC4-211ENST00000480015 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
ZIC4-211ENST00000480015 DCAF1Q9Y4B6 1507 aa16.35■□□□□ 0.21
ZIC4-211ENST00000480015 NACADO15069 1562 aa16.26■□□□□ 0.19
ZIC4-211ENST00000480015 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
ZIC4-211ENST00000480015 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
ZIC4-211ENST00000480015 UNC13AQ9UPW8 1703 aa15.75■□□□□ 0.11
ZIC4-211ENST00000480015 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
ZIC4-211ENST00000480015 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
ZIC4-211ENST00000480015 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.08
ZIC4-211ENST00000480015 PLPPR3Q6T4P5 718 aa15.53■□□□□ 0.08
ZIC4-211ENST00000480015 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
ZIC4-211ENST00000480015 FOXD1Q16676 465 aa15.23■□□□□ 0.03
ZIC4-211ENST00000480015 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.03
ZIC4-211ENST00000480015 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
ZIC4-211ENST00000480015 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
ZIC4-211ENST00000480015 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
ZIC4-211ENST00000480015 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
ZIC4-211ENST00000480015 SMARCA2P51531 1590 aa15.04■□□□□ -0
ZIC4-211ENST00000480015 MROH2BQ7Z745 1585 aa15.02□□□□□ -0.01
ZIC4-211ENST00000480015 CC2D2AQ9P2K1 1620 aa15.01□□□□□ -0.01
ZIC4-211ENST00000480015 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
ZIC4-211ENST00000480015 NCAPD3P42695 1498 aa14.96□□□□□ -0.01
ZIC4-211ENST00000480015 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
ZIC4-211ENST00000480015 HMGXB3Q12766 1538 aa14.95□□□□□ -0.02
ZIC4-211ENST00000480015 WIZO95785 1651 aa14.88□□□□□ -0.03
ZIC4-211ENST00000480015 BAZ1BQ9UIG0 1483 aaKnown RBP14.87□□□□□ -0.03
ZIC4-211ENST00000480015 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
ZIC4-211ENST00000480015 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
ZIC4-211ENST00000480015 ADRA2BP18089 450 aa14.74□□□□□ -0.05
ZIC4-211ENST00000480015 SUPT5HO00267 1087 aaKnown RBP14.72□□□□□ -0.05
ZIC4-211ENST00000480015 PPP6R1Q9UPN7 881 aa14.71□□□□□ -0.05
ZIC4-211ENST00000480015 CCDC88BA6NC98 1476 aa14.58□□□□□ -0.08
ZIC4-211ENST00000480015 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
ZIC4-211ENST00000480015 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
ZIC4-211ENST00000480015 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
ZIC4-211ENST00000480015 CFTRP13569 1480 aa14.5□□□□□ -0.09
ZIC4-211ENST00000480015 PIAS4Q8N2W9 510 aaPredicted RBP14.44□□□□□ -0.1
ZIC4-211ENST00000480015 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
ZIC4-211ENST00000480015 NESP48681 1621 aa14.33□□□□□ -0.11
ZIC4-211ENST00000480015 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
ZIC4-211ENST00000480015 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
ZIC4-211ENST00000480015 ABCC8Q09428 1581 aa14.29□□□□□ -0.12
ZIC4-211ENST00000480015 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
ZIC4-211ENST00000480015 KIF21AQ7Z4S6 1674 aa14.27□□□□□ -0.12
ZIC4-211ENST00000480015 MRC2Q9UBG0 1479 aa14.21□□□□□ -0.13
ZIC4-211ENST00000480015 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
ZIC4-211ENST00000480015 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
ZIC4-211ENST00000480015 WDR62O43379 1518 aa14.16□□□□□ -0.14
ZIC4-211ENST00000480015 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
ZIC4-211ENST00000480015 BIVM-ERCC5R4GMW8 1640 aa14.14□□□□□ -0.15
ZIC4-211ENST00000480015 TOP2BQ02880 1626 aa14.13□□□□□ -0.15
ZIC4-211ENST00000480015 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
ZIC4-211ENST00000480015 CUX2O14529 1486 aa14.11□□□□□ -0.15
ZIC4-211ENST00000480015 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
ZIC4-211ENST00000480015 CUX1P39880 1505 aa14.08□□□□□ -0.16
ZIC4-211ENST00000480015 MSH5O43196 834 aa14.07□□□□□ -0.16
ZIC4-211ENST00000480015 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
ZIC4-211ENST00000480015 WDR97A6NE52 1622 aa14.03□□□□□ -0.16
ZIC4-211ENST00000480015 POLA1P09884 1462 aaPredicted RBP14.01□□□□□ -0.17
ZIC4-211ENST00000480015 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
ZIC4-211ENST00000480015 FGD5Q6ZNL6 1462 aa14□□□□□ -0.17
ZIC4-211ENST00000480015 TRIM41Q8WV44 630 aa14□□□□□ -0.17
ZIC4-211ENST00000480015 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
ZIC4-211ENST00000480015 SOGA1O94964 1423 aa13.97□□□□□ -0.17
ZIC4-211ENST00000480015 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
ZIC4-211ENST00000480015 TARBP1Q13395 1621 aaKnown RBP13.95□□□□□ -0.18
ZIC4-211ENST00000480015 EEA1Q15075 1411 aa13.9□□□□□ -0.19
ZIC4-211ENST00000480015 KIF27Q86VH2 1401 aa13.88□□□□□ -0.19
ZIC4-211ENST00000480015 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
ZIC4-211ENST00000480015 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
ZIC4-211ENST00000480015 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.2
ZIC4-211ENST00000480015 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.2
ZIC4-211ENST00000480015 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
ZIC4-211ENST00000480015 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
ZIC4-211ENST00000480015 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
ZIC4-211ENST00000480015 CUL7Q14999 1698 aa13.79□□□□□ -0.2
ZIC4-211ENST00000480015 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
ZIC4-211ENST00000480015 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
ZIC4-211ENST00000480015 ZNF608Q9ULD9 1512 aaPredicted RBP13.78□□□□□ -0.2
ZIC4-211ENST00000480015 AQRO60306 1485 aaKnown RBP eCLIP13.75□□□□□ -0.21
ZIC4-211ENST00000480015 IGF1RP08069 1367 aa13.71□□□□□ -0.21
ZIC4-211ENST00000480015 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
ZIC4-211ENST00000480015 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.22
ZIC4-211ENST00000480015 SYNJ2O15056 1496 aa13.69□□□□□ -0.22
ZIC4-211ENST00000480015 ADAMTS12P58397 1594 aa13.68□□□□□ -0.22
ZIC4-211ENST00000480015 PPP4R3CPQ6ZMV5 832 aa13.67□□□□□ -0.22
ZIC4-211ENST00000480015 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
ZIC4-211ENST00000480015 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
ZIC4-211ENST00000480015 KIF21BO75037 1637 aa13.66□□□□□ -0.22
ZIC4-211ENST00000480015 CARMIL1Q5VZK9 1371 aa13.66□□□□□ -0.22
ZIC4-211ENST00000480015 PRXQ9BXM0 1461 aa13.66□□□□□ -0.22
ZIC4-211ENST00000480015 RAPGEF2Q9Y4G8 1499 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms