RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 NISCHQ9Y2I1 1504 aa40.63■■■■■ 4.09
TNFRSF8-204ENST00000479933 CCDC180Q9P1Z9 1646 aa34.95■■■■□ 3.19
TNFRSF8-204ENST00000479933 ZCCHC6Q5VYS8 1495 aaKnown RBP34.33■■■■□ 3.09
TNFRSF8-204ENST00000479933 SHROOM4Q9ULL8 1493 aa33.91■■■■□ 3.02
TNFRSF8-204ENST00000479933 DCAF1Q9Y4B6 1507 aa33.58■■■□□ 2.97
TNFRSF8-204ENST00000479933 DCAF8L2P0C7V8 631 aa33.31■■■□□ 2.92
TNFRSF8-204ENST00000479933 SUPT5HO00267 1087 aaKnown RBP33.16■■■□□ 2.9
TNFRSF8-204ENST00000479933 MYO15BQ96JP2 1530 aa32.8■■■□□ 2.84
TNFRSF8-204ENST00000479933 ABCC9O60706 1549 aa32.34■■■□□ 2.77
TNFRSF8-204ENST00000479933 SCRIBQ14160 1630 aa32.32■■■□□ 2.76
TNFRSF8-204ENST00000479933 NACADO15069 1562 aa32.32■■■□□ 2.76
TNFRSF8-204ENST00000479933 CHIC1Q5VXU3 224 aa32.25■■■□□ 2.75
TNFRSF8-204ENST00000479933 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
TNFRSF8-204ENST00000479933 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
TNFRSF8-204ENST00000479933 CECR2Q9BXF3 1484 aa31.5■■■□□ 2.63
TNFRSF8-204ENST00000479933 MROH2BQ7Z745 1585 aa31.44■■■□□ 2.62
TNFRSF8-204ENST00000479933 BAZ1AQ9NRL2 1556 aaPredicted RBP31.31■■■□□ 2.6
TNFRSF8-204ENST00000479933 WIZO95785 1651 aa31.25■■■□□ 2.59
TNFRSF8-204ENST00000479933 UNC13AQ9UPW8 1703 aa31.23■■■□□ 2.59
TNFRSF8-204ENST00000479933 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
TNFRSF8-204ENST00000479933 HRCP23327 699 aa31.07■■■□□ 2.56
TNFRSF8-204ENST00000479933 LOC105371045A0A1W2PR82 267 aa31.06■■■□□ 2.56
TNFRSF8-204ENST00000479933 SMARCA4P51532 1647 aa31.03■■■□□ 2.56
TNFRSF8-204ENST00000479933 TOP2AP11388 1531 aaKnown RBP30.94■■■□□ 2.54
TNFRSF8-204ENST00000479933 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
TNFRSF8-204ENST00000479933 BICRAQ9NZM4 1560 aa30.82■■■□□ 2.52
TNFRSF8-204ENST00000479933 PCGF6Q9BYE7 350 aa30.75■■■□□ 2.51
TNFRSF8-204ENST00000479933 PELP1Q8IZL8 1130 aaKnown RBP30.74■■■□□ 2.51
TNFRSF8-204ENST00000479933 SMARCA2P51531 1590 aa30.69■■■□□ 2.5
TNFRSF8-204ENST00000479933 CCDC88BA6NC98 1476 aa30.65■■■□□ 2.5
TNFRSF8-204ENST00000479933 PEG3Q9GZU2 1588 aa30.59■■■□□ 2.49
TNFRSF8-204ENST00000479933 FAM9AQ8IZU1 332 aaPredicted RBP30.56■■■□□ 2.48
TNFRSF8-204ENST00000479933 PABPN1Q86U42 306 aaKnown RBP eCLIP30.55■■■□□ 2.48
TNFRSF8-204ENST00000479933 TRIM26Q12899 539 aaPredicted RBP30.5■■■□□ 2.47
TNFRSF8-204ENST00000479933 ABCC8Q09428 1581 aa30.34■■■□□ 2.45
TNFRSF8-204ENST00000479933 ATAD2BQ9ULI0 1458 aa30.26■■■□□ 2.43
TNFRSF8-204ENST00000479933 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
TNFRSF8-204ENST00000479933 EEA1Q15075 1411 aa30.15■■■□□ 2.42
TNFRSF8-204ENST00000479933 EHMT2Q96KQ7 1210 aa30.1■■■□□ 2.41
TNFRSF8-204ENST00000479933 WRNQ14191 1432 aaPredicted RBP eCLIP30.03■■■□□ 2.4
TNFRSF8-204ENST00000479933 SOGA1O94964 1423 aa29.98■■■□□ 2.39
TNFRSF8-204ENST00000479933 PPARGC1BQ86YN6 1023 aaKnown RBP29.95■■■□□ 2.39
TNFRSF8-204ENST00000479933 CSRNP3Q8WYN3 585 aa29.89■■■□□ 2.38
TNFRSF8-204ENST00000479933 TNIKQ9UKE5 1360 aa29.88■■■□□ 2.37
TNFRSF8-204ENST00000479933 HMGXB3Q12766 1538 aa29.87■■■□□ 2.37
TNFRSF8-204ENST00000479933 SYNJ1O43426 1573 aa29.86■■■□□ 2.37
TNFRSF8-204ENST00000479933 ZEB1P37275 1124 aaPredicted RBP29.86■■■□□ 2.37
TNFRSF8-204ENST00000479933 NCAPD3P42695 1498 aa29.82■■■□□ 2.36
TNFRSF8-204ENST00000479933 CEP162Q5TB80 1403 aa29.8■■■□□ 2.36
TNFRSF8-204ENST00000479933 RUSC2Q8N2Y8 1516 aa29.8■■■□□ 2.36
TNFRSF8-204ENST00000479933 GOLGA3Q08378 1498 aa29.78■■■□□ 2.36
TNFRSF8-204ENST00000479933 MYT1Q01538 1121 aa29.77■■■□□ 2.36
TNFRSF8-204ENST00000479933 KIF21BO75037 1637 aa29.7■■■□□ 2.35
TNFRSF8-204ENST00000479933 CEP164Q9UPV0 1460 aa29.67■■■□□ 2.34
TNFRSF8-204ENST00000479933 TOP2BQ02880 1626 aa29.66■■■□□ 2.34
TNFRSF8-204ENST00000479933 UBTFP17480 764 aaKnown RBP29.63■■■□□ 2.33
TNFRSF8-204ENST00000479933 BIVM-ERCC5R4GMW8 1640 aa29.62■■■□□ 2.33
TNFRSF8-204ENST00000479933 CFTRP13569 1480 aa29.44■■■□□ 2.3
TNFRSF8-204ENST00000479933 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
TNFRSF8-204ENST00000479933 SCAF1Q9H7N4 1312 aaKnown RBP29.39■■■□□ 2.3
TNFRSF8-204ENST00000479933 CLIP1P30622 1438 aa29.34■■■□□ 2.29
TNFRSF8-204ENST00000479933 CUX1P39880 1505 aa29.33■■■□□ 2.29
TNFRSF8-204ENST00000479933 RAPGEF2Q9Y4G8 1499 aa29.32■■■□□ 2.28
TNFRSF8-204ENST00000479933 ERICH3Q5RHP9 1530 aa29.31■■■□□ 2.28
TNFRSF8-204ENST00000479933 VPS8Q8N3P4 1428 aa29.23■■■□□ 2.27
TNFRSF8-204ENST00000479933 PRXQ9BXM0 1461 aa29.23■■■□□ 2.27
TNFRSF8-204ENST00000479933 KIF27Q86VH2 1401 aa29.19■■■□□ 2.26
TNFRSF8-204ENST00000479933 CCER1Q8TC90 406 aaPredicted RBP29.14■■■□□ 2.26
TNFRSF8-204ENST00000479933 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.25
TNFRSF8-204ENST00000479933 CC2D2AQ9P2K1 1620 aa29.14■■■□□ 2.25
TNFRSF8-204ENST00000479933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.1■■■□□ 2.25
TNFRSF8-204ENST00000479933 TTBK1Q5TCY1 1321 aaPredicted RBP29.1■■■□□ 2.25
TNFRSF8-204ENST00000479933 APLP2Q06481 763 aa29.03■■■□□ 2.24
TNFRSF8-204ENST00000479933 ARAP1Q96P48 1450 aa28.9■■■□□ 2.22
TNFRSF8-204ENST00000479933 CUX2O14529 1486 aa28.88■■■□□ 2.21
TNFRSF8-204ENST00000479933 FGD5Q6ZNL6 1462 aa28.86■■■□□ 2.21
TNFRSF8-204ENST00000479933 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
TNFRSF8-204ENST00000479933 RANGAP1P46060 587 aaPredicted RBP28.84■■■□□ 2.21
TNFRSF8-204ENST00000479933 IGF1RP08069 1367 aa28.81■■■□□ 2.2
TNFRSF8-204ENST00000479933 DNMBPQ6XZF7 1577 aa28.76■■■□□ 2.19
TNFRSF8-204ENST00000479933 ARHGAP35Q9NRY4 1499 aa28.71■■■□□ 2.19
TNFRSF8-204ENST00000479933 ACIN1Q9UKV3 1341 aaKnown RBP28.71■■■□□ 2.19
TNFRSF8-204ENST00000479933 CARMIL1Q5VZK9 1371 aa28.69■■■□□ 2.18
TNFRSF8-204ENST00000479933 HNRNPUL2Q1KMD3 747 aaKnown RBP28.66■■■□□ 2.18
TNFRSF8-204ENST00000479933 LAMC3Q9Y6N6 1575 aa28.65■■■□□ 2.18
TNFRSF8-204ENST00000479933 TOPBP1Q92547 1522 aa28.63■■■□□ 2.17
TNFRSF8-204ENST00000479933 ABCA10Q8WWZ4 1543 aa28.62■■■□□ 2.17
TNFRSF8-204ENST00000479933 POLA1P09884 1462 aaPredicted RBP28.56■■■□□ 2.16
TNFRSF8-204ENST00000479933 NESP48681 1621 aa28.56■■■□□ 2.16
TNFRSF8-204ENST00000479933 MAP3K1Q13233 1512 aa28.54■■■□□ 2.16
TNFRSF8-204ENST00000479933 CUL7Q14999 1698 aa28.52■■■□□ 2.16
TNFRSF8-204ENST00000479933 RRBP1Q9P2E9 1410 aaKnown RBP28.52■■■□□ 2.16
TNFRSF8-204ENST00000479933 KANK4Q5T7N3 995 aaPredicted RBP28.51■■■□□ 2.15
TNFRSF8-204ENST00000479933 RAD54L2Q9Y4B4 1467 aa28.49■■■□□ 2.15
TNFRSF8-204ENST00000479933 NEUROD1Q13562 356 aa28.45■■■□□ 2.14
TNFRSF8-204ENST00000479933 WDR97A6NE52 1622 aa28.43■■■□□ 2.14
TNFRSF8-204ENST00000479933 TIAM1Q13009 1591 aa28.43■■■□□ 2.14
TNFRSF8-204ENST00000479933 FHAD1B1AJZ9 1412 aa28.43■■■□□ 2.14
TNFRSF8-204ENST00000479933 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
TNFRSF8-204ENST00000479933 URB2Q14146 1524 aaKnown RBP28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms