RNA–Protein interactions for RNA: ENST00000479369.6

PDE4DIP-213, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2

Gene PDE4DIP, Length 2,548 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-213ENST00000479369 NISCHQ9Y2I1 1504 aa19.36■□□□□ 0.69
PDE4DIP-213ENST00000479369 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
PDE4DIP-213ENST00000479369 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
PDE4DIP-213ENST00000479369 ABCC9O60706 1549 aa16.38■□□□□ 0.21
PDE4DIP-213ENST00000479369 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
PDE4DIP-213ENST00000479369 DCAF1Q9Y4B6 1507 aa16.11■□□□□ 0.17
PDE4DIP-213ENST00000479369 MYO15BQ96JP2 1530 aa16.1■□□□□ 0.17
PDE4DIP-213ENST00000479369 NACADO15069 1562 aa16.06■□□□□ 0.16
PDE4DIP-213ENST00000479369 RB1CC1Q8TDY2 1594 aa16.01■□□□□ 0.15
PDE4DIP-213ENST00000479369 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
PDE4DIP-213ENST00000479369 UNC13AQ9UPW8 1703 aa15.62■□□□□ 0.09
PDE4DIP-213ENST00000479369 SCRIBQ14160 1630 aa15.58■□□□□ 0.09
PDE4DIP-213ENST00000479369 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.07
PDE4DIP-213ENST00000479369 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
PDE4DIP-213ENST00000479369 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDE4DIP-213ENST00000479369 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
PDE4DIP-213ENST00000479369 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
PDE4DIP-213ENST00000479369 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
PDE4DIP-213ENST00000479369 BAZ1AQ9NRL2 1556 aaPredicted RBP15.02□□□□□ -0.01
PDE4DIP-213ENST00000479369 SMARCA4P51532 1647 aa14.98□□□□□ -0.01
PDE4DIP-213ENST00000479369 CECR2Q9BXF3 1484 aa14.97□□□□□ -0.01
PDE4DIP-213ENST00000479369 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
PDE4DIP-213ENST00000479369 DAXXQ9UER7 740 aaPredicted RBP14.9□□□□□ -0.02
PDE4DIP-213ENST00000479369 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
PDE4DIP-213ENST00000479369 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
PDE4DIP-213ENST00000479369 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
PDE4DIP-213ENST00000479369 SMARCA2P51531 1590 aa14.86□□□□□ -0.03
PDE4DIP-213ENST00000479369 RSF1Q96T23 1441 aaPredicted RBP14.81□□□□□ -0.04
PDE4DIP-213ENST00000479369 SUPT5HO00267 1087 aaKnown RBP14.81□□□□□ -0.04
PDE4DIP-213ENST00000479369 ATAD2BQ9ULI0 1458 aa14.8□□□□□ -0.04
PDE4DIP-213ENST00000479369 CHIC1Q5VXU3 224 aa14.79□□□□□ -0.04
PDE4DIP-213ENST00000479369 NCAPD3P42695 1498 aa14.77□□□□□ -0.04
PDE4DIP-213ENST00000479369 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
PDE4DIP-213ENST00000479369 PRKCSHP14314 528 aaPredicted RBP14.77□□□□□ -0.05
PDE4DIP-213ENST00000479369 WIZO95785 1651 aa14.74□□□□□ -0.05
PDE4DIP-213ENST00000479369 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
PDE4DIP-213ENST00000479369 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.06
PDE4DIP-213ENST00000479369 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
PDE4DIP-213ENST00000479369 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
PDE4DIP-213ENST00000479369 APLP2Q06481 763 aa14.47□□□□□ -0.09
PDE4DIP-213ENST00000479369 CCDC88BA6NC98 1476 aa14.42□□□□□ -0.1
PDE4DIP-213ENST00000479369 LAMC3Q9Y6N6 1575 aa14.38□□□□□ -0.11
PDE4DIP-213ENST00000479369 PRDM2Q13029 1718 aa14.34□□□□□ -0.11
PDE4DIP-213ENST00000479369 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
PDE4DIP-213ENST00000479369 CFTRP13569 1480 aa14.32□□□□□ -0.12
PDE4DIP-213ENST00000479369 KCNA4P22459 653 aa14.28□□□□□ -0.12
PDE4DIP-213ENST00000479369 NESP48681 1621 aa14.24□□□□□ -0.13
PDE4DIP-213ENST00000479369 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
PDE4DIP-213ENST00000479369 TIMELESSQ9UNS1 1208 aa14.21□□□□□ -0.13
PDE4DIP-213ENST00000479369 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
PDE4DIP-213ENST00000479369 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
PDE4DIP-213ENST00000479369 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
PDE4DIP-213ENST00000479369 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
PDE4DIP-213ENST00000479369 TTBK1Q5TCY1 1321 aaPredicted RBP14.1□□□□□ -0.15
PDE4DIP-213ENST00000479369 MYT1Q01538 1121 aa14.09□□□□□ -0.15
PDE4DIP-213ENST00000479369 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
PDE4DIP-213ENST00000479369 MRC2Q9UBG0 1479 aa14.08□□□□□ -0.16
PDE4DIP-213ENST00000479369 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
PDE4DIP-213ENST00000479369 THOC2Q8NI27 1593 aaKnown RBP14.07□□□□□ -0.16
PDE4DIP-213ENST00000479369 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
PDE4DIP-213ENST00000479369 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
PDE4DIP-213ENST00000479369 ERICH6Q7L0X2 663 aa14.04□□□□□ -0.16
PDE4DIP-213ENST00000479369 WDR62O43379 1518 aa14.04□□□□□ -0.16
PDE4DIP-213ENST00000479369 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
PDE4DIP-213ENST00000479369 AEBP2Q6ZN18 517 aaPredicted RBP14□□□□□ -0.17
PDE4DIP-213ENST00000479369 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
PDE4DIP-213ENST00000479369 TOPBP1Q92547 1522 aa13.98□□□□□ -0.17
PDE4DIP-213ENST00000479369 BIVM-ERCC5R4GMW8 1640 aa13.98□□□□□ -0.17
PDE4DIP-213ENST00000479369 CUX2O14529 1486 aa13.98□□□□□ -0.17
PDE4DIP-213ENST00000479369 WRNQ14191 1432 aaPredicted RBP eCLIP13.97□□□□□ -0.17
PDE4DIP-213ENST00000479369 TOP2BQ02880 1626 aa13.96□□□□□ -0.18
PDE4DIP-213ENST00000479369 CUX1P39880 1505 aa13.96□□□□□ -0.18
PDE4DIP-213ENST00000479369 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
PDE4DIP-213ENST00000479369 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
PDE4DIP-213ENST00000479369 TULP1O00294 542 aaPredicted RBP13.9□□□□□ -0.18
PDE4DIP-213ENST00000479369 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
PDE4DIP-213ENST00000479369 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
PDE4DIP-213ENST00000479369 ARXQ96QS3 562 aa13.87□□□□□ -0.19
PDE4DIP-213ENST00000479369 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
PDE4DIP-213ENST00000479369 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
PDE4DIP-213ENST00000479369 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
PDE4DIP-213ENST00000479369 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
PDE4DIP-213ENST00000479369 SOGA1O94964 1423 aa13.8□□□□□ -0.2
PDE4DIP-213ENST00000479369 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
PDE4DIP-213ENST00000479369 RAD54L2Q9Y4B4 1467 aa13.75□□□□□ -0.21
PDE4DIP-213ENST00000479369 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
PDE4DIP-213ENST00000479369 ABCA5Q8WWZ7 1642 aa13.72□□□□□ -0.21
PDE4DIP-213ENST00000479369 TAOK2Q9UL54 1235 aa13.71□□□□□ -0.21
PDE4DIP-213ENST00000479369 EIF4G3O43432 1585 aaKnown RBP13.71□□□□□ -0.21
PDE4DIP-213ENST00000479369 LOC105371045A0A1W2PR82 267 aa13.68□□□□□ -0.22
PDE4DIP-213ENST00000479369 KIF27Q86VH2 1401 aa13.68□□□□□ -0.22
PDE4DIP-213ENST00000479369 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
PDE4DIP-213ENST00000479369 PBRM1Q86U86 1689 aa13.68□□□□□ -0.22
PDE4DIP-213ENST00000479369 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
PDE4DIP-213ENST00000479369 EEA1Q15075 1411 aa13.66□□□□□ -0.22
PDE4DIP-213ENST00000479369 GRIN2BQ13224 1484 aa13.65□□□□□ -0.22
PDE4DIP-213ENST00000479369 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
PDE4DIP-213ENST00000479369 ERICH3Q5RHP9 1530 aa13.65□□□□□ -0.22
PDE4DIP-213ENST00000479369 EIF5BO60841 1220 aaKnown RBP13.64□□□□□ -0.23
PDE4DIP-213ENST00000479369 FAM9AQ8IZU1 332 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms