RNA–Protein interactions for RNA: ENST00000479351.5

CNTNAP3B-206, Transcript of contactin associated protein like 3B, humanhuman

TSL 5

Gene CNTNAP3B, Length 2,426 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-206ENST00000479351 NISCHQ9Y2I1 1504 aa45.27■■■■■ 4.84
CNTNAP3B-206ENST00000479351 CCDC180Q9P1Z9 1646 aa38.61■■■■□ 3.77
CNTNAP3B-206ENST00000479351 SHROOM4Q9ULL8 1493 aa38.49■■■■□ 3.75
CNTNAP3B-206ENST00000479351 ZCCHC6Q5VYS8 1495 aaKnown RBP38.22■■■■□ 3.71
CNTNAP3B-206ENST00000479351 DCAF8L2P0C7V8 631 aa37.73■■■■□ 3.63
CNTNAP3B-206ENST00000479351 SUPT5HO00267 1087 aaKnown RBP37.49■■■■□ 3.59
CNTNAP3B-206ENST00000479351 DCAF1Q9Y4B6 1507 aa37.04■■■■□ 3.52
CNTNAP3B-206ENST00000479351 SCRIBQ14160 1630 aa36.29■■■■□ 3.4
CNTNAP3B-206ENST00000479351 ABCC9O60706 1549 aa36.24■■■■□ 3.39
CNTNAP3B-206ENST00000479351 CHIC1Q5VXU3 224 aa36.22■■■■□ 3.39
CNTNAP3B-206ENST00000479351 MYO15BQ96JP2 1530 aa36.11■■■■□ 3.37
CNTNAP3B-206ENST00000479351 NACADO15069 1562 aa35.77■■■■□ 3.32
CNTNAP3B-206ENST00000479351 RSF1Q96T23 1441 aaPredicted RBP35.7■■■■□ 3.31
CNTNAP3B-206ENST00000479351 CECR2Q9BXF3 1484 aa35.44■■■■□ 3.26
CNTNAP3B-206ENST00000479351 RB1CC1Q8TDY2 1594 aa35.35■■■■□ 3.25
CNTNAP3B-206ENST00000479351 MROH2BQ7Z745 1585 aa35.25■■■■□ 3.23
CNTNAP3B-206ENST00000479351 LOC105371045A0A1W2PR82 267 aa35.21■■■■□ 3.23
CNTNAP3B-206ENST00000479351 WIZO95785 1651 aa35.07■■■■□ 3.2
CNTNAP3B-206ENST00000479351 UNC13AQ9UPW8 1703 aa34.9■■■■□ 3.18
CNTNAP3B-206ENST00000479351 TRIM41Q8WV44 630 aa34.86■■■■□ 3.17
CNTNAP3B-206ENST00000479351 BAZ1AQ9NRL2 1556 aaPredicted RBP34.76■■■■□ 3.16
CNTNAP3B-206ENST00000479351 PCGF6Q9BYE7 350 aa34.73■■■■□ 3.15
CNTNAP3B-206ENST00000479351 FAM9AQ8IZU1 332 aaPredicted RBP34.7■■■■□ 3.14
CNTNAP3B-206ENST00000479351 PABPN1Q86U42 306 aaKnown RBP eCLIP34.61■■■■□ 3.13
CNTNAP3B-206ENST00000479351 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
CNTNAP3B-206ENST00000479351 EHMT2Q96KQ7 1210 aa34.51■■■■□ 3.12
CNTNAP3B-206ENST00000479351 BICRAQ9NZM4 1560 aa34.45■■■■□ 3.11
CNTNAP3B-206ENST00000479351 TOP2AP11388 1531 aaKnown RBP34.41■■■■□ 3.1
CNTNAP3B-206ENST00000479351 EIF4G1Q04637 1599 aaKnown RBP34.39■■■■□ 3.1
CNTNAP3B-206ENST00000479351 HRCP23327 699 aa34.39■■■■□ 3.1
CNTNAP3B-206ENST00000479351 CCDC88BA6NC98 1476 aa34.3■■■■□ 3.08
CNTNAP3B-206ENST00000479351 SMARCA2P51531 1590 aa34.26■■■■□ 3.07
CNTNAP3B-206ENST00000479351 ABCC8Q09428 1581 aa34.17■■■■□ 3.06
CNTNAP3B-206ENST00000479351 TRIM26Q12899 539 aaPredicted RBP34.04■■■■□ 3.04
CNTNAP3B-206ENST00000479351 PPARGC1BQ86YN6 1023 aaKnown RBP33.93■■■■□ 3.02
CNTNAP3B-206ENST00000479351 PEG3Q9GZU2 1588 aa33.86■■■■□ 3.01
CNTNAP3B-206ENST00000479351 ATAD2BQ9ULI0 1458 aa33.77■■■■□ 3
CNTNAP3B-206ENST00000479351 SOGA1O94964 1423 aa33.74■■■□□ 2.99
CNTNAP3B-206ENST00000479351 BAZ1BQ9UIG0 1483 aaKnown RBP33.65■■■□□ 2.98
CNTNAP3B-206ENST00000479351 RUSC2Q8N2Y8 1516 aa33.64■■■□□ 2.98
CNTNAP3B-206ENST00000479351 WRNQ14191 1432 aaPredicted RBP eCLIP33.52■■■□□ 2.96
CNTNAP3B-206ENST00000479351 SYNJ1O43426 1573 aa33.46■■■□□ 2.95
CNTNAP3B-206ENST00000479351 CSRNP3Q8WYN3 585 aa33.4■■■□□ 2.94
CNTNAP3B-206ENST00000479351 CEP162Q5TB80 1403 aa33.35■■■□□ 2.93
CNTNAP3B-206ENST00000479351 EEA1Q15075 1411 aa33.29■■■□□ 2.92
CNTNAP3B-206ENST00000479351 UBTFP17480 764 aaKnown RBP33.28■■■□□ 2.92
CNTNAP3B-206ENST00000479351 TTBK1Q5TCY1 1321 aaPredicted RBP33.28■■■□□ 2.92
CNTNAP3B-206ENST00000479351 TNIKQ9UKE5 1360 aa33.25■■■□□ 2.91
CNTNAP3B-206ENST00000479351 GOLGA3Q08378 1498 aa33.15■■■□□ 2.9
CNTNAP3B-206ENST00000479351 NCAPD3P42695 1498 aa33.12■■■□□ 2.89
CNTNAP3B-206ENST00000479351 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
CNTNAP3B-206ENST00000479351 TOP2BQ02880 1626 aa33■■■□□ 2.87
CNTNAP3B-206ENST00000479351 CEP164Q9UPV0 1460 aa32.99■■■□□ 2.87
CNTNAP3B-206ENST00000479351 ZEB1P37275 1124 aaPredicted RBP32.99■■■□□ 2.87
CNTNAP3B-206ENST00000479351 KIF21BO75037 1637 aa32.96■■■□□ 2.87
CNTNAP3B-206ENST00000479351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.92■■■□□ 2.86
CNTNAP3B-206ENST00000479351 RAPGEF2Q9Y4G8 1499 aa32.92■■■□□ 2.86
CNTNAP3B-206ENST00000479351 BIVM-ERCC5R4GMW8 1640 aa32.89■■■□□ 2.86
CNTNAP3B-206ENST00000479351 RANGAP1P46060 587 aaPredicted RBP32.87■■■□□ 2.85
CNTNAP3B-206ENST00000479351 CUX1P39880 1505 aa32.83■■■□□ 2.85
CNTNAP3B-206ENST00000479351 CLIP1P30622 1438 aa32.79■■■□□ 2.84
CNTNAP3B-206ENST00000479351 CFTRP13569 1480 aa32.78■■■□□ 2.84
CNTNAP3B-206ENST00000479351 CCER1Q8TC90 406 aaPredicted RBP32.7■■■□□ 2.83
CNTNAP3B-206ENST00000479351 CC2D2AQ9P2K1 1620 aa32.59■■■□□ 2.81
CNTNAP3B-206ENST00000479351 VPS8Q8N3P4 1428 aa32.57■■■□□ 2.8
CNTNAP3B-206ENST00000479351 PRXQ9BXM0 1461 aa32.56■■■□□ 2.8
CNTNAP3B-206ENST00000479351 PRDM2Q13029 1718 aa32.5■■■□□ 2.79
CNTNAP3B-206ENST00000479351 CADPSQ9ULU8 1353 aa32.48■■■□□ 2.79
CNTNAP3B-206ENST00000479351 KIF27Q86VH2 1401 aa32.48■■■□□ 2.79
CNTNAP3B-206ENST00000479351 ERICH3Q5RHP9 1530 aa32.47■■■□□ 2.79
CNTNAP3B-206ENST00000479351 HNRNPUL2Q1KMD3 747 aaKnown RBP32.38■■■□□ 2.77
CNTNAP3B-206ENST00000479351 ARAP1Q96P48 1450 aa32.36■■■□□ 2.77
CNTNAP3B-206ENST00000479351 APLP2Q06481 763 aa32.35■■■□□ 2.77
CNTNAP3B-206ENST00000479351 CUX2O14529 1486 aa32.33■■■□□ 2.77
CNTNAP3B-206ENST00000479351 FGD5Q6ZNL6 1462 aa32.29■■■□□ 2.76
CNTNAP3B-206ENST00000479351 NESP48681 1621 aa32.22■■■□□ 2.75
CNTNAP3B-206ENST00000479351 FANCD2Q9BXW9 1451 aa32.21■■■□□ 2.75
CNTNAP3B-206ENST00000479351 IGF1RP08069 1367 aa32.21■■■□□ 2.75
CNTNAP3B-206ENST00000479351 KANK4Q5T7N3 995 aaPredicted RBP32.17■■■□□ 2.74
CNTNAP3B-206ENST00000479351 ARHGAP35Q9NRY4 1499 aa32.13■■■□□ 2.73
CNTNAP3B-206ENST00000479351 RAD54L2Q9Y4B4 1467 aa32.06■■■□□ 2.72
CNTNAP3B-206ENST00000479351 CARMIL1Q5VZK9 1371 aa32.06■■■□□ 2.72
CNTNAP3B-206ENST00000479351 DNAJC5BQ9UF47 199 aa32.05■■■□□ 2.72
CNTNAP3B-206ENST00000479351 DNMBPQ6XZF7 1577 aa31.97■■■□□ 2.71
CNTNAP3B-206ENST00000479351 TOPBP1Q92547 1522 aa31.97■■■□□ 2.71
CNTNAP3B-206ENST00000479351 POLA1P09884 1462 aaPredicted RBP31.95■■■□□ 2.71
CNTNAP3B-206ENST00000479351 P3H3Q8IVL6 736 aa31.85■■■□□ 2.69
CNTNAP3B-206ENST00000479351 ABCA10Q8WWZ4 1543 aa31.83■■■□□ 2.69
CNTNAP3B-206ENST00000479351 DIEXFQ68CQ4 756 aaKnown RBP31.82■■■□□ 2.68
CNTNAP3B-206ENST00000479351 URB2Q14146 1524 aaKnown RBP31.82■■■□□ 2.68
CNTNAP3B-206ENST00000479351 LAMC3Q9Y6N6 1575 aa31.76■■■□□ 2.67
CNTNAP3B-206ENST00000479351 RRBP1Q9P2E9 1410 aaKnown RBP31.74■■■□□ 2.67
CNTNAP3B-206ENST00000479351 ITGAEP38570 1179 aa31.7■■■□□ 2.67
CNTNAP3B-206ENST00000479351 TIAM1Q13009 1591 aa31.68■■■□□ 2.66
CNTNAP3B-206ENST00000479351 ZNF316A6NFI3 1004 aaPredicted RBP31.67■■■□□ 2.66
CNTNAP3B-206ENST00000479351 TDRD9Q8NDG6 1382 aaKnown RBP31.67■■■□□ 2.66
CNTNAP3B-206ENST00000479351 FHOD3Q2V2M9 1422 aa31.66■■■□□ 2.66
CNTNAP3B-206ENST00000479351 CCNB3Q8WWL7 1395 aa31.66■■■□□ 2.66
CNTNAP3B-206ENST00000479351 ATP1B4Q9UN42 357 aaPredicted RBP31.64■■■□□ 2.66
CNTNAP3B-206ENST00000479351 WDR97A6NE52 1622 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms