RNA–Protein interactions for RNA: ENST00000478859.5

FGFR2-218, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best) BASIC

Gene FGFR2, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-218ENST00000478859 NISCHQ9Y2I1 1504 aa13.84□□□□□ -0.19
FGFR2-218ENST00000478859 SHROOM4Q9ULL8 1493 aa11.82□□□□□ -0.52
FGFR2-218ENST00000478859 DCAF8L2P0C7V8 631 aa11.79□□□□□ -0.52
FGFR2-218ENST00000478859 CCDC180Q9P1Z9 1646 aa11.77□□□□□ -0.53
FGFR2-218ENST00000478859 ZCCHC6Q5VYS8 1495 aaKnown RBP11.64□□□□□ -0.55
FGFR2-218ENST00000478859 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
FGFR2-218ENST00000478859 DCAF1Q9Y4B6 1507 aa11.29□□□□□ -0.6
FGFR2-218ENST00000478859 ABCC9O60706 1549 aa11.23□□□□□ -0.61
FGFR2-218ENST00000478859 SCRIBQ14160 1630 aa11.1□□□□□ -0.63
FGFR2-218ENST00000478859 CHIC1Q5VXU3 224 aa11.05□□□□□ -0.64
FGFR2-218ENST00000478859 MYO15BQ96JP2 1530 aa11.03□□□□□ -0.64
FGFR2-218ENST00000478859 NACADO15069 1562 aa10.99□□□□□ -0.65
FGFR2-218ENST00000478859 RSF1Q96T23 1441 aaPredicted RBP10.91□□□□□ -0.66
FGFR2-218ENST00000478859 RB1CC1Q8TDY2 1594 aa10.87□□□□□ -0.67
FGFR2-218ENST00000478859 CECR2Q9BXF3 1484 aa10.84□□□□□ -0.67
FGFR2-218ENST00000478859 LOC105371045A0A1W2PR82 267 aa10.76□□□□□ -0.69
FGFR2-218ENST00000478859 PABPN1Q86U42 306 aaKnown RBP eCLIP10.76□□□□□ -0.69
FGFR2-218ENST00000478859 MROH2BQ7Z745 1585 aa10.76□□□□□ -0.69
FGFR2-218ENST00000478859 TRIM41Q8WV44 630 aa10.75□□□□□ -0.69
FGFR2-218ENST00000478859 FAM9AQ8IZU1 332 aaPredicted RBP10.7□□□□□ -0.7
FGFR2-218ENST00000478859 WIZO95785 1651 aa10.67□□□□□ -0.7
FGFR2-218ENST00000478859 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
FGFR2-218ENST00000478859 BAZ1AQ9NRL2 1556 aaPredicted RBP10.64□□□□□ -0.71
FGFR2-218ENST00000478859 PCGF6Q9BYE7 350 aa10.59□□□□□ -0.71
FGFR2-218ENST00000478859 UNC13AQ9UPW8 1703 aa10.58□□□□□ -0.72
FGFR2-218ENST00000478859 SMARCA4P51532 1647 aa10.55□□□□□ -0.72
FGFR2-218ENST00000478859 BICRAQ9NZM4 1560 aa10.52□□□□□ -0.73
FGFR2-218ENST00000478859 TOP2AP11388 1531 aaKnown RBP10.5□□□□□ -0.73
FGFR2-218ENST00000478859 CCDC88BA6NC98 1476 aa10.49□□□□□ -0.73
FGFR2-218ENST00000478859 SMARCA2P51531 1590 aa10.43□□□□□ -0.74
FGFR2-218ENST00000478859 ABCC8Q09428 1581 aa10.4□□□□□ -0.74
FGFR2-218ENST00000478859 HRCP23327 699 aa10.39□□□□□ -0.75
FGFR2-218ENST00000478859 TRIM26Q12899 539 aaPredicted RBP10.39□□□□□ -0.75
FGFR2-218ENST00000478859 ATAD2BQ9ULI0 1458 aa10.37□□□□□ -0.75
FGFR2-218ENST00000478859 BAZ1BQ9UIG0 1483 aaKnown RBP10.36□□□□□ -0.75
FGFR2-218ENST00000478859 PPARGC1BQ86YN6 1023 aaKnown RBP10.35□□□□□ -0.75
FGFR2-218ENST00000478859 EIF4G1Q04637 1599 aaKnown RBP10.35□□□□□ -0.75
FGFR2-218ENST00000478859 UBTFP17480 764 aaKnown RBP10.31□□□□□ -0.76
FGFR2-218ENST00000478859 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
FGFR2-218ENST00000478859 SOGA1O94964 1423 aa10.3□□□□□ -0.76
FGFR2-218ENST00000478859 CSRNP3Q8WYN3 585 aa10.29□□□□□ -0.76
FGFR2-218ENST00000478859 WRNQ14191 1432 aaPredicted RBP eCLIP10.29□□□□□ -0.76
FGFR2-218ENST00000478859 TTBK1Q5TCY1 1321 aaPredicted RBP10.26□□□□□ -0.77
FGFR2-218ENST00000478859 RUSC2Q8N2Y8 1516 aa10.24□□□□□ -0.77
FGFR2-218ENST00000478859 RANGAP1P46060 587 aaPredicted RBP10.2□□□□□ -0.78
FGFR2-218ENST00000478859 EEA1Q15075 1411 aa10.19□□□□□ -0.78
FGFR2-218ENST00000478859 NCAPD3P42695 1498 aa10.19□□□□□ -0.78
FGFR2-218ENST00000478859 SYNJ1O43426 1573 aa10.17□□□□□ -0.78
FGFR2-218ENST00000478859 CEP162Q5TB80 1403 aa10.17□□□□□ -0.78
FGFR2-218ENST00000478859 TNIKQ9UKE5 1360 aa10.16□□□□□ -0.78
FGFR2-218ENST00000478859 GOLGA3Q08378 1498 aa10.13□□□□□ -0.79
FGFR2-218ENST00000478859 HMGXB3Q12766 1538 aa10.13□□□□□ -0.79
FGFR2-218ENST00000478859 ZEB1P37275 1124 aaPredicted RBP10.09□□□□□ -0.79
FGFR2-218ENST00000478859 CEP164Q9UPV0 1460 aa10.09□□□□□ -0.79
FGFR2-218ENST00000478859 APLP2Q06481 763 aa10.07□□□□□ -0.8
FGFR2-218ENST00000478859 CFTRP13569 1480 aa10.05□□□□□ -0.8
FGFR2-218ENST00000478859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.05□□□□□ -0.8
FGFR2-218ENST00000478859 TOP2BQ02880 1626 aa10.05□□□□□ -0.8
FGFR2-218ENST00000478859 CCER1Q8TC90 406 aaPredicted RBP10.05□□□□□ -0.8
FGFR2-218ENST00000478859 CLIP1P30622 1438 aa10.04□□□□□ -0.8
FGFR2-218ENST00000478859 RAPGEF2Q9Y4G8 1499 aa10.04□□□□□ -0.8
FGFR2-218ENST00000478859 CADPSQ9ULU8 1353 aa10.03□□□□□ -0.8
FGFR2-218ENST00000478859 CC2D2AQ9P2K1 1620 aa10.03□□□□□ -0.8
FGFR2-218ENST00000478859 CUX1P39880 1505 aa10.02□□□□□ -0.81
FGFR2-218ENST00000478859 KIF21BO75037 1637 aa10□□□□□ -0.81
FGFR2-218ENST00000478859 KIF27Q86VH2 1401 aa10□□□□□ -0.81
FGFR2-218ENST00000478859 BIVM-ERCC5R4GMW8 1640 aa9.98□□□□□ -0.81
FGFR2-218ENST00000478859 HNRNPUL2Q1KMD3 747 aaKnown RBP9.96□□□□□ -0.81
FGFR2-218ENST00000478859 CUX2O14529 1486 aa9.95□□□□□ -0.82
FGFR2-218ENST00000478859 VPS8Q8N3P4 1428 aa9.94□□□□□ -0.82
FGFR2-218ENST00000478859 PRXQ9BXM0 1461 aa9.93□□□□□ -0.82
FGFR2-218ENST00000478859 FANCD2Q9BXW9 1451 aa9.92□□□□□ -0.82
FGFR2-218ENST00000478859 NESP48681 1621 aa9.91□□□□□ -0.82
FGFR2-218ENST00000478859 FGD5Q6ZNL6 1462 aa9.91□□□□□ -0.82
FGFR2-218ENST00000478859 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
FGFR2-218ENST00000478859 IGF1RP08069 1367 aa9.89□□□□□ -0.83
FGFR2-218ENST00000478859 ERICH3Q5RHP9 1530 aa9.88□□□□□ -0.83
FGFR2-218ENST00000478859 CARMIL1Q5VZK9 1371 aa9.88□□□□□ -0.83
FGFR2-218ENST00000478859 ATP1B4Q9UN42 357 aaPredicted RBP9.87□□□□□ -0.83
FGFR2-218ENST00000478859 P3H3Q8IVL6 736 aa9.86□□□□□ -0.83
FGFR2-218ENST00000478859 RAD54L2Q9Y4B4 1467 aa9.85□□□□□ -0.83
FGFR2-218ENST00000478859 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
FGFR2-218ENST00000478859 PRDM2Q13029 1718 aa9.84□□□□□ -0.83
FGFR2-218ENST00000478859 ARAP1Q96P48 1450 aa9.83□□□□□ -0.84
FGFR2-218ENST00000478859 TOPBP1Q92547 1522 aa9.81□□□□□ -0.84
FGFR2-218ENST00000478859 ITGAEP38570 1179 aa9.81□□□□□ -0.84
FGFR2-218ENST00000478859 POLA1P09884 1462 aaPredicted RBP9.8□□□□□ -0.84
FGFR2-218ENST00000478859 DNMBPQ6XZF7 1577 aa9.79□□□□□ -0.84
FGFR2-218ENST00000478859 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
FGFR2-218ENST00000478859 PDS5BQ9NTI5 1447 aa9.79□□□□□ -0.84
FGFR2-218ENST00000478859 TDRD9Q8NDG6 1382 aaKnown RBP9.79□□□□□ -0.84
FGFR2-218ENST00000478859 LAMC3Q9Y6N6 1575 aa9.76□□□□□ -0.85
FGFR2-218ENST00000478859 URB2Q14146 1524 aaKnown RBP9.75□□□□□ -0.85
FGFR2-218ENST00000478859 ABCA10Q8WWZ4 1543 aa9.75□□□□□ -0.85
FGFR2-218ENST00000478859 FAM50AQ14320 339 aaKnown RBP9.71□□□□□ -0.86
FGFR2-218ENST00000478859 FHOD3Q2V2M9 1422 aa9.7□□□□□ -0.86
FGFR2-218ENST00000478859 DIEXFQ68CQ4 756 aaKnown RBP9.7□□□□□ -0.86
FGFR2-218ENST00000478859 GAPVD1Q14C86 1478 aa9.69□□□□□ -0.86
FGFR2-218ENST00000478859 CCNB3Q8WWL7 1395 aa9.69□□□□□ -0.86
FGFR2-218ENST00000478859 FHAD1B1AJZ9 1412 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms