RNA–Protein interactions for RNA: ENST00000478194.1

FERMT1-203, Transcript of fermitin family member 1, humanhuman

TSL 1 (best)

Gene FERMT1, Length 3,322 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT1-203ENST00000478194 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
FERMT1-203ENST00000478194 CCDC180Q9P1Z9 1646 aa17.16■□□□□ 0.34
FERMT1-203ENST00000478194 ZCCHC6Q5VYS8 1495 aaKnown RBP16.69■□□□□ 0.26
FERMT1-203ENST00000478194 DCAF1Q9Y4B6 1507 aa16.41■□□□□ 0.22
FERMT1-203ENST00000478194 MYO15BQ96JP2 1530 aa16.15■□□□□ 0.18
FERMT1-203ENST00000478194 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
FERMT1-203ENST00000478194 NACADO15069 1562 aa15.87■□□□□ 0.13
FERMT1-203ENST00000478194 ABCC9O60706 1549 aa15.86■□□□□ 0.13
FERMT1-203ENST00000478194 DCAF8L2P0C7V8 631 aa15.84■□□□□ 0.13
FERMT1-203ENST00000478194 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
FERMT1-203ENST00000478194 SCRIBQ14160 1630 aa15.71■□□□□ 0.11
FERMT1-203ENST00000478194 RB1CC1Q8TDY2 1594 aa15.64■□□□□ 0.09
FERMT1-203ENST00000478194 UNC13AQ9UPW8 1703 aa15.5■□□□□ 0.07
FERMT1-203ENST00000478194 SUPT5HO00267 1087 aaKnown RBP15.47■□□□□ 0.07
FERMT1-203ENST00000478194 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
FERMT1-203ENST00000478194 MYT1Q01538 1121 aa15.38■□□□□ 0.05
FERMT1-203ENST00000478194 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
FERMT1-203ENST00000478194 BICRAQ9NZM4 1560 aa15.34■□□□□ 0.05
FERMT1-203ENST00000478194 MROH2BQ7Z745 1585 aa15.29■□□□□ 0.04
FERMT1-203ENST00000478194 HRCP23327 699 aa15.24■□□□□ 0.03
FERMT1-203ENST00000478194 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
FERMT1-203ENST00000478194 WIZO95785 1651 aa15.17■□□□□ 0.02
FERMT1-203ENST00000478194 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
FERMT1-203ENST00000478194 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
FERMT1-203ENST00000478194 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
FERMT1-203ENST00000478194 EIF4G1Q04637 1599 aaKnown RBP15.02□□□□□ -0.01
FERMT1-203ENST00000478194 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
FERMT1-203ENST00000478194 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
FERMT1-203ENST00000478194 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
FERMT1-203ENST00000478194 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
FERMT1-203ENST00000478194 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
FERMT1-203ENST00000478194 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
FERMT1-203ENST00000478194 PPARGC1BQ86YN6 1023 aaKnown RBP14.75□□□□□ -0.05
FERMT1-203ENST00000478194 TTBK1Q5TCY1 1321 aaPredicted RBP14.72□□□□□ -0.05
FERMT1-203ENST00000478194 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
FERMT1-203ENST00000478194 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
FERMT1-203ENST00000478194 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
FERMT1-203ENST00000478194 ABCC8Q09428 1581 aa14.58□□□□□ -0.08
FERMT1-203ENST00000478194 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
FERMT1-203ENST00000478194 LOC105371045A0A1W2PR82 267 aa14.48□□□□□ -0.09
FERMT1-203ENST00000478194 CC2D2AQ9P2K1 1620 aa14.46□□□□□ -0.09
FERMT1-203ENST00000478194 SYNJ1O43426 1573 aa14.45□□□□□ -0.1
FERMT1-203ENST00000478194 PCGF6Q9BYE7 350 aa14.42□□□□□ -0.1
FERMT1-203ENST00000478194 CFTRP13569 1480 aa14.41□□□□□ -0.1
FERMT1-203ENST00000478194 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.1
FERMT1-203ENST00000478194 PRDM2Q13029 1718 aa14.4□□□□□ -0.11
FERMT1-203ENST00000478194 BIVM-ERCC5R4GMW8 1640 aa14.38□□□□□ -0.11
FERMT1-203ENST00000478194 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
FERMT1-203ENST00000478194 SOGA1O94964 1423 aa14.34□□□□□ -0.11
FERMT1-203ENST00000478194 RUSC2Q8N2Y8 1516 aa14.32□□□□□ -0.12
FERMT1-203ENST00000478194 EEA1Q15075 1411 aa14.3□□□□□ -0.12
FERMT1-203ENST00000478194 CUX1P39880 1505 aa14.28□□□□□ -0.12
FERMT1-203ENST00000478194 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
FERMT1-203ENST00000478194 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
FERMT1-203ENST00000478194 PRKCSHP14314 528 aaPredicted RBP14.22□□□□□ -0.13
FERMT1-203ENST00000478194 KIF21BO75037 1637 aa14.21□□□□□ -0.14
FERMT1-203ENST00000478194 BCL11AQ9H165 835 aa14.2□□□□□ -0.14
FERMT1-203ENST00000478194 ACIN1Q9UKV3 1341 aaKnown RBP14.2□□□□□ -0.14
FERMT1-203ENST00000478194 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
FERMT1-203ENST00000478194 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
FERMT1-203ENST00000478194 LAMC3Q9Y6N6 1575 aa14.11□□□□□ -0.15
FERMT1-203ENST00000478194 GOLGA3Q08378 1498 aa14.1□□□□□ -0.15
FERMT1-203ENST00000478194 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
FERMT1-203ENST00000478194 PRXQ9BXM0 1461 aa14.08□□□□□ -0.15
FERMT1-203ENST00000478194 NESP48681 1621 aa14.08□□□□□ -0.16
FERMT1-203ENST00000478194 NEUROD1Q13562 356 aa14.08□□□□□ -0.16
FERMT1-203ENST00000478194 FANCD2Q9BXW9 1451 aa14.08□□□□□ -0.16
FERMT1-203ENST00000478194 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
FERMT1-203ENST00000478194 ZEB1P37275 1124 aaPredicted RBP14.06□□□□□ -0.16
FERMT1-203ENST00000478194 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
FERMT1-203ENST00000478194 CEP162Q5TB80 1403 aa14.05□□□□□ -0.16
FERMT1-203ENST00000478194 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
FERMT1-203ENST00000478194 DNMBPQ6XZF7 1577 aa14.04□□□□□ -0.16
FERMT1-203ENST00000478194 GTF3C3Q9Y5Q9 886 aa14.03□□□□□ -0.16
FERMT1-203ENST00000478194 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
FERMT1-203ENST00000478194 CENPBP07199 599 aaPredicted RBP14.01□□□□□ -0.17
FERMT1-203ENST00000478194 TOPBP1Q92547 1522 aa13.99□□□□□ -0.17
FERMT1-203ENST00000478194 WDR97A6NE52 1622 aa13.99□□□□□ -0.17
FERMT1-203ENST00000478194 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
FERMT1-203ENST00000478194 KIF27Q86VH2 1401 aa13.97□□□□□ -0.17
FERMT1-203ENST00000478194 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
FERMT1-203ENST00000478194 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.18
FERMT1-203ENST00000478194 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
FERMT1-203ENST00000478194 POLA1P09884 1462 aaPredicted RBP13.94□□□□□ -0.18
FERMT1-203ENST00000478194 TRIM26Q12899 539 aaPredicted RBP13.94□□□□□ -0.18
FERMT1-203ENST00000478194 IGF1RP08069 1367 aa13.93□□□□□ -0.18
FERMT1-203ENST00000478194 CUX2O14529 1486 aa13.9□□□□□ -0.18
FERMT1-203ENST00000478194 APLP2Q06481 763 aa13.9□□□□□ -0.18
FERMT1-203ENST00000478194 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
FERMT1-203ENST00000478194 ERICH6Q7L0X2 663 aa13.88□□□□□ -0.19
FERMT1-203ENST00000478194 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
FERMT1-203ENST00000478194 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
FERMT1-203ENST00000478194 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
FERMT1-203ENST00000478194 CLIP1P30622 1438 aa13.85□□□□□ -0.19
FERMT1-203ENST00000478194 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
FERMT1-203ENST00000478194 UBTFP17480 764 aaKnown RBP13.83□□□□□ -0.2
FERMT1-203ENST00000478194 VPS8Q8N3P4 1428 aa13.82□□□□□ -0.2
FERMT1-203ENST00000478194 CUL7Q14999 1698 aa13.8□□□□□ -0.2
FERMT1-203ENST00000478194 ANP32EQ9BTT0 268 aa13.78□□□□□ -0.2
FERMT1-203ENST00000478194 CARMIL1Q5VZK9 1371 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms