RNA–Protein interactions for RNA: ENST00000475770.5

KRIT1-221, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 1 (best)

Gene KRIT1, Length 2,411 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-221ENST00000475770 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
KRIT1-221ENST00000475770 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
KRIT1-221ENST00000475770 CCDC180Q9P1Z9 1646 aa16■□□□□ 0.15
KRIT1-221ENST00000475770 CHIC1Q5VXU3 224 aa15.83■□□□□ 0.12
KRIT1-221ENST00000475770 ABCC9O60706 1549 aa15.38■□□□□ 0.05
KRIT1-221ENST00000475770 ZCCHC6Q5VYS8 1495 aaKnown RBP15.28■□□□□ 0.04
KRIT1-221ENST00000475770 DCAF8L2P0C7V8 631 aa15.13■□□□□ 0.01
KRIT1-221ENST00000475770 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0
KRIT1-221ENST00000475770 MYO15BQ96JP2 1530 aa15□□□□□ -0.01
KRIT1-221ENST00000475770 NACADO15069 1562 aa14.97□□□□□ -0.01
KRIT1-221ENST00000475770 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
KRIT1-221ENST00000475770 SLC24A1O60721 1099 aa14.73□□□□□ -0.05
KRIT1-221ENST00000475770 SHROOM4Q9ULL8 1493 aa14.71□□□□□ -0.06
KRIT1-221ENST00000475770 SCRIBQ14160 1630 aa14.69□□□□□ -0.06
KRIT1-221ENST00000475770 SENP3Q9H4L4 574 aaPredicted RBP14.62□□□□□ -0.07
KRIT1-221ENST00000475770 UNC13AQ9UPW8 1703 aa14.55□□□□□ -0.08
KRIT1-221ENST00000475770 POTEDQ86YR6 584 aa14.52□□□□□ -0.08
KRIT1-221ENST00000475770 MYT1Q01538 1121 aa14.47□□□□□ -0.09
KRIT1-221ENST00000475770 BICRAQ9NZM4 1560 aa14.46□□□□□ -0.09
KRIT1-221ENST00000475770 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
KRIT1-221ENST00000475770 PELP1Q8IZL8 1130 aaKnown RBP14.32□□□□□ -0.12
KRIT1-221ENST00000475770 TTBK1Q5TCY1 1321 aaPredicted RBP14.26□□□□□ -0.13
KRIT1-221ENST00000475770 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.14
KRIT1-221ENST00000475770 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
KRIT1-221ENST00000475770 BAZ1AQ9NRL2 1556 aaPredicted RBP14.1□□□□□ -0.15
KRIT1-221ENST00000475770 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.15
KRIT1-221ENST00000475770 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
KRIT1-221ENST00000475770 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
KRIT1-221ENST00000475770 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
KRIT1-221ENST00000475770 SUPT5HO00267 1087 aaKnown RBP14.01□□□□□ -0.17
KRIT1-221ENST00000475770 WIZO95785 1651 aa13.94□□□□□ -0.18
KRIT1-221ENST00000475770 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
KRIT1-221ENST00000475770 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
KRIT1-221ENST00000475770 CC2D2AQ9P2K1 1620 aa13.9□□□□□ -0.18
KRIT1-221ENST00000475770 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
KRIT1-221ENST00000475770 NCAPD3P42695 1498 aa13.83□□□□□ -0.19
KRIT1-221ENST00000475770 BAZ1BQ9UIG0 1483 aaKnown RBP13.82□□□□□ -0.2
KRIT1-221ENST00000475770 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
KRIT1-221ENST00000475770 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
KRIT1-221ENST00000475770 HMGXB3Q12766 1538 aa13.79□□□□□ -0.2
KRIT1-221ENST00000475770 DAXXQ9UER7 740 aaPredicted RBP13.79□□□□□ -0.2
KRIT1-221ENST00000475770 APLP2Q06481 763 aa13.7□□□□□ -0.22
KRIT1-221ENST00000475770 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
KRIT1-221ENST00000475770 ERICH6Q7L0X2 663 aa13.68□□□□□ -0.22
KRIT1-221ENST00000475770 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
KRIT1-221ENST00000475770 FOXD1Q16676 465 aa13.62□□□□□ -0.23
KRIT1-221ENST00000475770 CFTRP13569 1480 aa13.46□□□□□ -0.25
KRIT1-221ENST00000475770 CADPSQ9ULU8 1353 aa13.46□□□□□ -0.25
KRIT1-221ENST00000475770 NESP48681 1621 aa13.42□□□□□ -0.26
KRIT1-221ENST00000475770 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
KRIT1-221ENST00000475770 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
KRIT1-221ENST00000475770 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
KRIT1-221ENST00000475770 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
KRIT1-221ENST00000475770 MSH5O43196 834 aa13.29□□□□□ -0.28
KRIT1-221ENST00000475770 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
KRIT1-221ENST00000475770 CEP164Q9UPV0 1460 aa13.25□□□□□ -0.29
KRIT1-221ENST00000475770 WRNQ14191 1432 aaPredicted RBP eCLIP13.24□□□□□ -0.29
KRIT1-221ENST00000475770 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
KRIT1-221ENST00000475770 ERCC6Q03468 1493 aa13.21□□□□□ -0.29
KRIT1-221ENST00000475770 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
KRIT1-221ENST00000475770 SYNJ1O43426 1573 aa13.19□□□□□ -0.3
KRIT1-221ENST00000475770 CUX1P39880 1505 aa13.19□□□□□ -0.3
KRIT1-221ENST00000475770 URB2Q14146 1524 aaKnown RBP13.16□□□□□ -0.3
KRIT1-221ENST00000475770 MRC2Q9UBG0 1479 aa13.15□□□□□ -0.3
KRIT1-221ENST00000475770 TOP2BQ02880 1626 aa13.15□□□□□ -0.3
KRIT1-221ENST00000475770 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
KRIT1-221ENST00000475770 DNMBPQ6XZF7 1577 aa13.13□□□□□ -0.31
KRIT1-221ENST00000475770 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
KRIT1-221ENST00000475770 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
KRIT1-221ENST00000475770 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
KRIT1-221ENST00000475770 WDR62O43379 1518 aa13.1□□□□□ -0.31
KRIT1-221ENST00000475770 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.31
KRIT1-221ENST00000475770 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
KRIT1-221ENST00000475770 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
KRIT1-221ENST00000475770 SOGA1O94964 1423 aa13.01□□□□□ -0.33
KRIT1-221ENST00000475770 CUX2O14529 1486 aa13□□□□□ -0.33
KRIT1-221ENST00000475770 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
KRIT1-221ENST00000475770 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
KRIT1-221ENST00000475770 TARBP1Q13395 1621 aaKnown RBP12.95□□□□□ -0.34
KRIT1-221ENST00000475770 IFT140Q96RY7 1462 aa12.95□□□□□ -0.34
KRIT1-221ENST00000475770 FAM9AQ8IZU1 332 aaPredicted RBP12.94□□□□□ -0.34
KRIT1-221ENST00000475770 KIF27Q86VH2 1401 aa12.93□□□□□ -0.34
KRIT1-221ENST00000475770 WDR97A6NE52 1622 aa12.92□□□□□ -0.34
KRIT1-221ENST00000475770 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
KRIT1-221ENST00000475770 EEA1Q15075 1411 aa12.9□□□□□ -0.34
KRIT1-221ENST00000475770 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.34
KRIT1-221ENST00000475770 AQRO60306 1485 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■□□□□ 8.5
KRIT1-221ENST00000475770 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
KRIT1-221ENST00000475770 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
KRIT1-221ENST00000475770 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
KRIT1-221ENST00000475770 EIF4G3O43432 1585 aaKnown RBP12.84□□□□□ -0.35
KRIT1-221ENST00000475770 IGF1RP08069 1367 aa12.84□□□□□ -0.35
KRIT1-221ENST00000475770 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
KRIT1-221ENST00000475770 ARXQ96QS3 562 aa12.82□□□□□ -0.36
KRIT1-221ENST00000475770 EHMT2Q96KQ7 1210 aa12.81□□□□□ -0.36
KRIT1-221ENST00000475770 ERICH3Q5RHP9 1530 aa12.8□□□□□ -0.36
KRIT1-221ENST00000475770 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
KRIT1-221ENST00000475770 PRXQ9BXM0 1461 aa12.78□□□□□ -0.36
KRIT1-221ENST00000475770 RTN4Q9NQC3 1192 aaKnown RBP12.78□□□□□ -0.36
KRIT1-221ENST00000475770 PBRM1Q86U86 1689 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms