RNA–Protein interactions for RNA: ENST00000475659.1

CRB1-205, Transcript of crumbs 1, cell polarity complex component, humanhuman

TSL 1 (best)

Gene CRB1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRB1-205ENST00000475659 NISCHQ9Y2I1 1504 aa21.44■■□□□ 1.02
CRB1-205ENST00000475659 CCDC180Q9P1Z9 1646 aa18.3■□□□□ 0.52
CRB1-205ENST00000475659 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
CRB1-205ENST00000475659 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
CRB1-205ENST00000475659 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
CRB1-205ENST00000475659 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
CRB1-205ENST00000475659 DCAF1Q9Y4B6 1507 aa17.58■□□□□ 0.4
CRB1-205ENST00000475659 SCRIBQ14160 1630 aa17.14■□□□□ 0.34
CRB1-205ENST00000475659 ABCC9O60706 1549 aa17.13■□□□□ 0.33
CRB1-205ENST00000475659 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
CRB1-205ENST00000475659 CHIC1Q5VXU3 224 aa17.11■□□□□ 0.33
CRB1-205ENST00000475659 NACADO15069 1562 aa16.95■□□□□ 0.3
CRB1-205ENST00000475659 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
CRB1-205ENST00000475659 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
CRB1-205ENST00000475659 RB1CC1Q8TDY2 1594 aa16.73■□□□□ 0.27
CRB1-205ENST00000475659 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
CRB1-205ENST00000475659 LOC105371045A0A1W2PR82 267 aa16.6■□□□□ 0.25
CRB1-205ENST00000475659 WIZO95785 1651 aa16.58■□□□□ 0.24
CRB1-205ENST00000475659 UNC13AQ9UPW8 1703 aa16.51■□□□□ 0.23
CRB1-205ENST00000475659 BAZ1AQ9NRL2 1556 aaPredicted RBP16.46■□□□□ 0.23
CRB1-205ENST00000475659 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
CRB1-205ENST00000475659 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
CRB1-205ENST00000475659 PCGF6Q9BYE7 350 aa16.36■□□□□ 0.21
CRB1-205ENST00000475659 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
CRB1-205ENST00000475659 FAM9AQ8IZU1 332 aaPredicted RBP16.34■□□□□ 0.21
CRB1-205ENST00000475659 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
CRB1-205ENST00000475659 EIF4G1Q04637 1599 aaKnown RBP16.31■□□□□ 0.2
CRB1-205ENST00000475659 TOP2AP11388 1531 aaKnown RBP16.3■□□□□ 0.2
CRB1-205ENST00000475659 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
CRB1-205ENST00000475659 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
CRB1-205ENST00000475659 HRCP23327 699 aa16.22■□□□□ 0.19
CRB1-205ENST00000475659 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
CRB1-205ENST00000475659 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
CRB1-205ENST00000475659 PEG3Q9GZU2 1588 aa16.07■□□□□ 0.16
CRB1-205ENST00000475659 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
CRB1-205ENST00000475659 ATAD2BQ9ULI0 1458 aa16■□□□□ 0.15
CRB1-205ENST00000475659 PPARGC1BQ86YN6 1023 aaKnown RBP15.98■□□□□ 0.15
CRB1-205ENST00000475659 SOGA1O94964 1423 aa15.96■□□□□ 0.14
CRB1-205ENST00000475659 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
CRB1-205ENST00000475659 RUSC2Q8N2Y8 1516 aa15.91■□□□□ 0.14
CRB1-205ENST00000475659 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
CRB1-205ENST00000475659 SYNJ1O43426 1573 aa15.83■□□□□ 0.13
CRB1-205ENST00000475659 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
CRB1-205ENST00000475659 EEA1Q15075 1411 aa15.76■□□□□ 0.11
CRB1-205ENST00000475659 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
CRB1-205ENST00000475659 TNIKQ9UKE5 1360 aa15.72■□□□□ 0.11
CRB1-205ENST00000475659 NCAPD3P42695 1498 aa15.71■□□□□ 0.1
CRB1-205ENST00000475659 HMGXB3Q12766 1538 aa15.69■□□□□ 0.1
CRB1-205ENST00000475659 UBTFP17480 764 aaKnown RBP15.68■□□□□ 0.1
CRB1-205ENST00000475659 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
CRB1-205ENST00000475659 TTBK1Q5TCY1 1321 aaPredicted RBP15.64■□□□□ 0.09
CRB1-205ENST00000475659 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
CRB1-205ENST00000475659 CEP164Q9UPV0 1460 aa15.6■□□□□ 0.09
CRB1-205ENST00000475659 KIF21BO75037 1637 aa15.6■□□□□ 0.09
CRB1-205ENST00000475659 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
CRB1-205ENST00000475659 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
CRB1-205ENST00000475659 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
CRB1-205ENST00000475659 CUX1P39880 1505 aa15.54■□□□□ 0.08
CRB1-205ENST00000475659 CFTRP13569 1480 aa15.54■□□□□ 0.08
CRB1-205ENST00000475659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.07
CRB1-205ENST00000475659 CLIP1P30622 1438 aa15.5■□□□□ 0.07
CRB1-205ENST00000475659 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
CRB1-205ENST00000475659 PRXQ9BXM0 1461 aa15.43■□□□□ 0.06
CRB1-205ENST00000475659 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
CRB1-205ENST00000475659 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
CRB1-205ENST00000475659 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
CRB1-205ENST00000475659 CADPSQ9ULU8 1353 aa15.38■□□□□ 0.05
CRB1-205ENST00000475659 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
CRB1-205ENST00000475659 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
CRB1-205ENST00000475659 KIF27Q86VH2 1401 aa15.36■□□□□ 0.05
CRB1-205ENST00000475659 ARAP1Q96P48 1450 aa15.31■□□□□ 0.04
CRB1-205ENST00000475659 CUX2O14529 1486 aa15.28■□□□□ 0.04
CRB1-205ENST00000475659 FGD5Q6ZNL6 1462 aa15.28■□□□□ 0.04
CRB1-205ENST00000475659 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
CRB1-205ENST00000475659 IGF1RP08069 1367 aa15.25■□□□□ 0.03
CRB1-205ENST00000475659 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
CRB1-205ENST00000475659 NESP48681 1621 aa15.24■□□□□ 0.03
CRB1-205ENST00000475659 APLP2Q06481 763 aa15.23■□□□□ 0.03
CRB1-205ENST00000475659 ARHGAP35Q9NRY4 1499 aa15.21■□□□□ 0.02
CRB1-205ENST00000475659 KANK4Q5T7N3 995 aaPredicted RBP15.2■□□□□ 0.02
CRB1-205ENST00000475659 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
CRB1-205ENST00000475659 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
CRB1-205ENST00000475659 CARMIL1Q5VZK9 1371 aa15.15■□□□□ 0.02
CRB1-205ENST00000475659 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
CRB1-205ENST00000475659 TOPBP1Q92547 1522 aa15.13■□□□□ 0.01
CRB1-205ENST00000475659 POLA1P09884 1462 aaPredicted RBP15.13■□□□□ 0.01
CRB1-205ENST00000475659 ABCA10Q8WWZ4 1543 aa15.08■□□□□ 0
CRB1-205ENST00000475659 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
CRB1-205ENST00000475659 LAMC3Q9Y6N6 1575 aa15.05■□□□□ -0
CRB1-205ENST00000475659 RRBP1Q9P2E9 1410 aaKnown RBP15.03■□□□□ -0
CRB1-205ENST00000475659 P3H3Q8IVL6 736 aa15.01□□□□□ -0.01
CRB1-205ENST00000475659 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
CRB1-205ENST00000475659 TIAM1Q13009 1591 aa14.99□□□□□ -0.01
CRB1-205ENST00000475659 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
CRB1-205ENST00000475659 TDRD9Q8NDG6 1382 aaKnown RBP14.97□□□□□ -0.01
CRB1-205ENST00000475659 CCNB3Q8WWL7 1395 aa14.96□□□□□ -0.01
CRB1-205ENST00000475659 FHOD3Q2V2M9 1422 aa14.96□□□□□ -0.01
CRB1-205ENST00000475659 DHX57Q6P158 1386 aaKnown RBP14.95□□□□□ -0.02
CRB1-205ENST00000475659 PCF11O94913 1555 aaKnown RBP14.95□□□□□ -0.02
CRB1-205ENST00000475659 KIF21AQ7Z4S6 1674 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms