RNA–Protein interactions for RNA: ENST00000475060.1

CTPS1-207, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-207ENST00000475060 NISCHQ9Y2I1 1504 aa14.39□□□□□ -0.11
CTPS1-207ENST00000475060 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.17
CTPS1-207ENST00000475060 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
CTPS1-207ENST00000475060 CCDC180Q9P1Z9 1646 aa12.53□□□□□ -0.4
CTPS1-207ENST00000475060 ZCCHC6Q5VYS8 1495 aaKnown RBP12.19□□□□□ -0.46
CTPS1-207ENST00000475060 DCAF1Q9Y4B6 1507 aa12.05□□□□□ -0.48
CTPS1-207ENST00000475060 PHF23Q9BUL5 403 aaPredicted RBP12.01□□□□□ -0.49
CTPS1-207ENST00000475060 MYO15BQ96JP2 1530 aa11.83□□□□□ -0.52
CTPS1-207ENST00000475060 SENP3Q9H4L4 574 aaPredicted RBP11.78□□□□□ -0.52
CTPS1-207ENST00000475060 SHROOM4Q9ULL8 1493 aa11.61□□□□□ -0.55
CTPS1-207ENST00000475060 NACADO15069 1562 aa11.54□□□□□ -0.56
CTPS1-207ENST00000475060 ABCC9O60706 1549 aa11.47□□□□□ -0.57
CTPS1-207ENST00000475060 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
CTPS1-207ENST00000475060 SCRIBQ14160 1630 aa11.35□□□□□ -0.59
CTPS1-207ENST00000475060 RB1CC1Q8TDY2 1594 aa11.33□□□□□ -0.6
CTPS1-207ENST00000475060 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
CTPS1-207ENST00000475060 RSF1Q96T23 1441 aaPredicted RBP11.23□□□□□ -0.61
CTPS1-207ENST00000475060 UNC13AQ9UPW8 1703 aa11.14□□□□□ -0.63
CTPS1-207ENST00000475060 BAZ1AQ9NRL2 1556 aaPredicted RBP11.11□□□□□ -0.63
CTPS1-207ENST00000475060 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
CTPS1-207ENST00000475060 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
CTPS1-207ENST00000475060 PLPPR3Q6T4P5 718 aa11.04□□□□□ -0.64
CTPS1-207ENST00000475060 BICRAQ9NZM4 1560 aa11.02□□□□□ -0.65
CTPS1-207ENST00000475060 SMARCA4P51532 1647 aa11.01□□□□□ -0.65
CTPS1-207ENST00000475060 EIF4G1Q04637 1599 aaKnown RBP10.99□□□□□ -0.65
CTPS1-207ENST00000475060 WIZO95785 1651 aa10.98□□□□□ -0.65
CTPS1-207ENST00000475060 PEG3Q9GZU2 1588 aa10.98□□□□□ -0.65
CTPS1-207ENST00000475060 TOP2AP11388 1531 aaKnown RBP10.96□□□□□ -0.65
CTPS1-207ENST00000475060 FOXD1Q16676 465 aa10.96□□□□□ -0.65
CTPS1-207ENST00000475060 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
CTPS1-207ENST00000475060 CCDC88BA6NC98 1476 aa10.77□□□□□ -0.69
CTPS1-207ENST00000475060 ATAD2BQ9ULI0 1458 aa10.73□□□□□ -0.69
CTPS1-207ENST00000475060 TRIM41Q8WV44 630 aa10.69□□□□□ -0.7
CTPS1-207ENST00000475060 HMGXB3Q12766 1538 aa10.68□□□□□ -0.7
CTPS1-207ENST00000475060 NCAPD3P42695 1498 aa10.64□□□□□ -0.71
CTPS1-207ENST00000475060 BAZ1BQ9UIG0 1483 aaKnown RBP10.64□□□□□ -0.71
CTPS1-207ENST00000475060 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
CTPS1-207ENST00000475060 EEA1Q15075 1411 aa10.63□□□□□ -0.71
CTPS1-207ENST00000475060 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
CTPS1-207ENST00000475060 PPP6R1Q9UPN7 881 aa10.58□□□□□ -0.72
CTPS1-207ENST00000475060 LOC105371045A0A1W2PR82 267 aa10.57□□□□□ -0.72
CTPS1-207ENST00000475060 ADRA2BP18089 450 aa10.55□□□□□ -0.72
CTPS1-207ENST00000475060 WRNQ14191 1432 aaPredicted RBP eCLIP10.54□□□□□ -0.72
CTPS1-207ENST00000475060 BIVM-ERCC5R4GMW8 1640 aa10.52□□□□□ -0.73
CTPS1-207ENST00000475060 PRDM2Q13029 1718 aa10.51□□□□□ -0.73
CTPS1-207ENST00000475060 SYNJ1O43426 1573 aa10.51□□□□□ -0.73
CTPS1-207ENST00000475060 TOP2BQ02880 1626 aa10.5□□□□□ -0.73
CTPS1-207ENST00000475060 KIF21BO75037 1637 aa10.48□□□□□ -0.73
CTPS1-207ENST00000475060 CFTRP13569 1480 aa10.47□□□□□ -0.73
CTPS1-207ENST00000475060 TNIKQ9UKE5 1360 aa10.44□□□□□ -0.74
CTPS1-207ENST00000475060 SOGA1O94964 1423 aa10.43□□□□□ -0.74
CTPS1-207ENST00000475060 HRCP23327 699 aa10.43□□□□□ -0.74
CTPS1-207ENST00000475060 TRIM26Q12899 539 aaPredicted RBP10.43□□□□□ -0.74
CTPS1-207ENST00000475060 GOLGA3Q08378 1498 aa10.42□□□□□ -0.74
CTPS1-207ENST00000475060 CEP164Q9UPV0 1460 aa10.4□□□□□ -0.74
CTPS1-207ENST00000475060 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
CTPS1-207ENST00000475060 ERICH3Q5RHP9 1530 aa10.38□□□□□ -0.75
CTPS1-207ENST00000475060 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
CTPS1-207ENST00000475060 PCGF6Q9BYE7 350 aa10.37□□□□□ -0.75
CTPS1-207ENST00000475060 FAM9AQ8IZU1 332 aaPredicted RBP10.36□□□□□ -0.75
CTPS1-207ENST00000475060 CEP162Q5TB80 1403 aa10.35□□□□□ -0.75
CTPS1-207ENST00000475060 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
CTPS1-207ENST00000475060 CUX1P39880 1505 aa10.34□□□□□ -0.75
CTPS1-207ENST00000475060 PIAS4Q8N2W9 510 aaPredicted RBP10.33□□□□□ -0.76
CTPS1-207ENST00000475060 PRXQ9BXM0 1461 aa10.32□□□□□ -0.76
CTPS1-207ENST00000475060 CADPSQ9ULU8 1353 aa10.31□□□□□ -0.76
CTPS1-207ENST00000475060 KIF27Q86VH2 1401 aa10.24□□□□□ -0.77
CTPS1-207ENST00000475060 RAPGEF2Q9Y4G8 1499 aa10.24□□□□□ -0.77
CTPS1-207ENST00000475060 LAMC3Q9Y6N6 1575 aa10.23□□□□□ -0.77
CTPS1-207ENST00000475060 VPS8Q8N3P4 1428 aa10.22□□□□□ -0.77
CTPS1-207ENST00000475060 DNMBPQ6XZF7 1577 aa10.22□□□□□ -0.77
CTPS1-207ENST00000475060 ZEB1P37275 1124 aaPredicted RBP10.21□□□□□ -0.77
CTPS1-207ENST00000475060 CLIP1P30622 1438 aa10.21□□□□□ -0.78
CTPS1-207ENST00000475060 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
CTPS1-207ENST00000475060 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
CTPS1-207ENST00000475060 WDR97A6NE52 1622 aa10.16□□□□□ -0.78
CTPS1-207ENST00000475060 ABCA10Q8WWZ4 1543 aa10.16□□□□□ -0.78
CTPS1-207ENST00000475060 UBTFP17480 764 aaKnown RBP10.14□□□□□ -0.79
CTPS1-207ENST00000475060 TOPBP1Q92547 1522 aa10.13□□□□□ -0.79
CTPS1-207ENST00000475060 ARAP1Q96P48 1450 aa10.13□□□□□ -0.79
CTPS1-207ENST00000475060 IGF1RP08069 1367 aa10.12□□□□□ -0.79
CTPS1-207ENST00000475060 CUL7Q14999 1698 aa10.12□□□□□ -0.79
CTPS1-207ENST00000475060 CUX2O14529 1486 aa10.11□□□□□ -0.79
CTPS1-207ENST00000475060 MAP3K1Q13233 1512 aa10.11□□□□□ -0.79
CTPS1-207ENST00000475060 POLA1P09884 1462 aaPredicted RBP10.1□□□□□ -0.79
CTPS1-207ENST00000475060 ABCA5Q8WWZ7 1642 aa10.07□□□□□ -0.8
CTPS1-207ENST00000475060 ARHGAP35Q9NRY4 1499 aa10.07□□□□□ -0.8
CTPS1-207ENST00000475060 EHMT2Q96KQ7 1210 aa10.07□□□□□ -0.8
CTPS1-207ENST00000475060 URB2Q14146 1524 aaKnown RBP10.06□□□□□ -0.8
CTPS1-207ENST00000475060 PDS5BQ9NTI5 1447 aa10.06□□□□□ -0.8
CTPS1-207ENST00000475060 NESP48681 1621 aa10.05□□□□□ -0.8
CTPS1-207ENST00000475060 MSH5O43196 834 aa10.05□□□□□ -0.8
CTPS1-207ENST00000475060 CARMIL1Q5VZK9 1371 aa10.04□□□□□ -0.8
CTPS1-207ENST00000475060 EFCAB5A4FU69 1503 aa10.04□□□□□ -0.8
CTPS1-207ENST00000475060 CTTNBP2Q8WZ74 1663 aa10.02□□□□□ -0.8
CTPS1-207ENST00000475060 KIF21AQ7Z4S6 1674 aa10.02□□□□□ -0.81
CTPS1-207ENST00000475060 TARBP1Q13395 1621 aaKnown RBP10.01□□□□□ -0.81
CTPS1-207ENST00000475060 RRBP1Q9P2E9 1410 aaKnown RBP10□□□□□ -0.81
CTPS1-207ENST00000475060 AQRO60306 1485 aaKnown RBP eCLIP10□□□□□ -0.81
CTPS1-207ENST00000475060 CFAP43Q8NDM7 1665 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms