RNA–Protein interactions for RNA: ENST00000474046.1

PBX1-207, Transcript of PBX homeobox 1, humanhuman

TSL 2

Gene PBX1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-207ENST00000474046 NISCHQ9Y2I1 1504 aa17.29■□□□□ 0.36
PBX1-207ENST00000474046 CCDC180Q9P1Z9 1646 aa15.09■□□□□ 0.01
PBX1-207ENST00000474046 ZCCHC6Q5VYS8 1495 aaKnown RBP14.51□□□□□ -0.09
PBX1-207ENST00000474046 ABCC9O60706 1549 aa14.33□□□□□ -0.12
PBX1-207ENST00000474046 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
PBX1-207ENST00000474046 DCAF8L2P0C7V8 631 aa14.27□□□□□ -0.12
PBX1-207ENST00000474046 MYO15BQ96JP2 1530 aa14.16□□□□□ -0.14
PBX1-207ENST00000474046 NACADO15069 1562 aa14.08□□□□□ -0.16
PBX1-207ENST00000474046 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
PBX1-207ENST00000474046 RB1CC1Q8TDY2 1594 aa13.97□□□□□ -0.17
PBX1-207ENST00000474046 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
PBX1-207ENST00000474046 UNC13AQ9UPW8 1703 aa13.69□□□□□ -0.22
PBX1-207ENST00000474046 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
PBX1-207ENST00000474046 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
PBX1-207ENST00000474046 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
PBX1-207ENST00000474046 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
PBX1-207ENST00000474046 RSF1Q96T23 1441 aaPredicted RBP13.4□□□□□ -0.26
PBX1-207ENST00000474046 MROH2BQ7Z745 1585 aa13.35□□□□□ -0.27
PBX1-207ENST00000474046 BAZ1AQ9NRL2 1556 aaPredicted RBP13.34□□□□□ -0.27
PBX1-207ENST00000474046 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
PBX1-207ENST00000474046 WIZO95785 1651 aa13.23□□□□□ -0.29
PBX1-207ENST00000474046 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
PBX1-207ENST00000474046 PEG3Q9GZU2 1588 aa13.15□□□□□ -0.3
PBX1-207ENST00000474046 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
PBX1-207ENST00000474046 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
PBX1-207ENST00000474046 SMARCA2P51531 1590 aa13.09□□□□□ -0.31
PBX1-207ENST00000474046 BAZ1BQ9UIG0 1483 aaKnown RBP13.01□□□□□ -0.33
PBX1-207ENST00000474046 NCAPD3P42695 1498 aa13.01□□□□□ -0.33
PBX1-207ENST00000474046 HMGXB3Q12766 1538 aa12.97□□□□□ -0.33
PBX1-207ENST00000474046 CC2D2AQ9P2K1 1620 aa12.97□□□□□ -0.33
PBX1-207ENST00000474046 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
PBX1-207ENST00000474046 CHIC1Q5VXU3 224 aa12.89□□□□□ -0.35
PBX1-207ENST00000474046 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
PBX1-207ENST00000474046 DNAJC5BQ9UF47 199 aa12.72□□□□□ -0.37
PBX1-207ENST00000474046 CFTRP13569 1480 aa12.7□□□□□ -0.38
PBX1-207ENST00000474046 TRIM41Q8WV44 630 aa12.68□□□□□ -0.38
PBX1-207ENST00000474046 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
PBX1-207ENST00000474046 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
PBX1-207ENST00000474046 MYT1Q01538 1121 aa12.65□□□□□ -0.38
PBX1-207ENST00000474046 PRDM2Q13029 1718 aa12.61□□□□□ -0.39
PBX1-207ENST00000474046 WRNQ14191 1432 aaPredicted RBP eCLIP12.59□□□□□ -0.399e-6■■■■■ 50.1
PBX1-207ENST00000474046 NESP48681 1621 aa12.57□□□□□ -0.4
PBX1-207ENST00000474046 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
PBX1-207ENST00000474046 SYNJ1O43426 1573 aa12.55□□□□□ -0.4
PBX1-207ENST00000474046 FANCD2Q9BXW9 1451 aa12.51□□□□□ -0.41
PBX1-207ENST00000474046 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
PBX1-207ENST00000474046 CUX1P39880 1505 aa12.5□□□□□ -0.41
PBX1-207ENST00000474046 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
PBX1-207ENST00000474046 PDS5BQ9NTI5 1447 aa12.47□□□□□ -0.41
PBX1-207ENST00000474046 CEP164Q9UPV0 1460 aa12.44□□□□□ -0.42
PBX1-207ENST00000474046 FAM9AQ8IZU1 332 aaPredicted RBP12.44□□□□□ -0.42
PBX1-207ENST00000474046 SOGA1O94964 1423 aa12.42□□□□□ -0.42
PBX1-207ENST00000474046 KIF21AQ7Z4S6 1674 aa12.4□□□□□ -0.42
PBX1-207ENST00000474046 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
PBX1-207ENST00000474046 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
PBX1-207ENST00000474046 RUSC2Q8N2Y8 1516 aa12.38□□□□□ -0.43
PBX1-207ENST00000474046 EEA1Q15075 1411 aa12.38□□□□□ -0.43
PBX1-207ENST00000474046 TOPBP1Q92547 1522 aa12.38□□□□□ -0.43
PBX1-207ENST00000474046 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
PBX1-207ENST00000474046 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
PBX1-207ENST00000474046 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
PBX1-207ENST00000474046 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
PBX1-207ENST00000474046 MRC2Q9UBG0 1479 aa12.31□□□□□ -0.44
PBX1-207ENST00000474046 ERCC6Q03468 1493 aa12.28□□□□□ -0.44
PBX1-207ENST00000474046 KIF27Q86VH2 1401 aa12.28□□□□□ -0.44
PBX1-207ENST00000474046 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.45
PBX1-207ENST00000474046 HRCP23327 699 aa12.27□□□□□ -0.45
PBX1-207ENST00000474046 CUX2O14529 1486 aa12.26□□□□□ -0.45
PBX1-207ENST00000474046 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
PBX1-207ENST00000474046 EHMT2Q96KQ7 1210 aa12.25□□□□□ -0.45
PBX1-207ENST00000474046 WDR62O43379 1518 aa12.25□□□□□ -0.45
PBX1-207ENST00000474046 THOC2Q8NI27 1593 aaKnown RBP12.23□□□□□ -0.45
PBX1-207ENST00000474046 KIF21BO75037 1637 aa12.22□□□□□ -0.45
PBX1-207ENST00000474046 WDR97A6NE52 1622 aa12.21□□□□□ -0.46
PBX1-207ENST00000474046 GOLGA3Q08378 1498 aa12.2□□□□□ -0.46
PBX1-207ENST00000474046 TARBP1Q13395 1621 aaKnown RBP12.2□□□□□ -0.46
PBX1-207ENST00000474046 IGF1RP08069 1367 aa12.2□□□□□ -0.46
PBX1-207ENST00000474046 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
PBX1-207ENST00000474046 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
PBX1-207ENST00000474046 TNIKQ9UKE5 1360 aa12.16□□□□□ -0.46
PBX1-207ENST00000474046 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
PBX1-207ENST00000474046 ERICH3Q5RHP9 1530 aa12.16□□□□□ -0.46
PBX1-207ENST00000474046 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.46
PBX1-207ENST00000474046 IFT140Q96RY7 1462 aa12.15□□□□□ -0.46
PBX1-207ENST00000474046 UBTFP17480 764 aaKnown RBP12.14□□□□□ -0.47
PBX1-207ENST00000474046 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
PBX1-207ENST00000474046 CARMIL1Q5VZK9 1371 aa12.13□□□□□ -0.47
PBX1-207ENST00000474046 TTBK1Q5TCY1 1321 aaPredicted RBP12.12□□□□□ -0.47
PBX1-207ENST00000474046 AQRO60306 1485 aaKnown RBP eCLIP12.1□□□□□ -0.47
PBX1-207ENST00000474046 ZNF608Q9ULD9 1512 aaPredicted RBP12.09□□□□□ -0.47
PBX1-207ENST00000474046 CEP162Q5TB80 1403 aa12.09□□□□□ -0.47
PBX1-207ENST00000474046 CUL7Q14999 1698 aa12.08□□□□□ -0.48
PBX1-207ENST00000474046 PBRM1Q86U86 1689 aa12.06□□□□□ -0.48
PBX1-207ENST00000474046 GRIN2BQ13224 1484 aa12.05□□□□□ -0.48
PBX1-207ENST00000474046 EIF4G3O43432 1585 aaKnown RBP12.03□□□□□ -0.48
PBX1-207ENST00000474046 CLIP1P30622 1438 aa12.01□□□□□ -0.49
PBX1-207ENST00000474046 FHAD1B1AJZ9 1412 aa12□□□□□ -0.49
PBX1-207ENST00000474046 ADAMTS12P58397 1594 aa12□□□□□ -0.49
PBX1-207ENST00000474046 SNAPC4Q5SXM2 1469 aa11.97□□□□□ -0.49
PBX1-207ENST00000474046 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms