RNA–Protein interactions for RNA: ENST00000472850.3

SSPO-204, Transcript of SCO-spondin, humanhuman

TSL 2

Gene SSPO, Length 2,542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-204ENST00000472850 NISCHQ9Y2I1 1504 aa34.3■■■■□ 3.08
SSPO-204ENST00000472850 CCDC180Q9P1Z9 1646 aa29.37■■■□□ 2.29
SSPO-204ENST00000472850 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
SSPO-204ENST00000472850 ZCCHC6Q5VYS8 1495 aaKnown RBP28.95■■■□□ 2.22
SSPO-204ENST00000472850 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
SSPO-204ENST00000472850 SUPT5HO00267 1087 aaKnown RBP28.21■■■□□ 2.11
SSPO-204ENST00000472850 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
SSPO-204ENST00000472850 ABCC9O60706 1549 aa27.47■■□□□ 1.99
SSPO-204ENST00000472850 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
SSPO-204ENST00000472850 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
SSPO-204ENST00000472850 CHIC1Q5VXU3 224 aa27.25■■□□□ 1.95
SSPO-204ENST00000472850 NACADO15069 1562 aa27.2■■□□□ 1.94
SSPO-204ENST00000472850 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
SSPO-204ENST00000472850 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
SSPO-204ENST00000472850 CECR2Q9BXF3 1484 aa26.79■■□□□ 1.88
SSPO-204ENST00000472850 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
SSPO-204ENST00000472850 WIZO95785 1651 aa26.54■■□□□ 1.84
SSPO-204ENST00000472850 UNC13AQ9UPW8 1703 aa26.54■■□□□ 1.84
SSPO-204ENST00000472850 LOC105371045A0A1W2PR82 267 aa26.44■■□□□ 1.82
SSPO-204ENST00000472850 HRCP23327 699 aa26.42■■□□□ 1.82
SSPO-204ENST00000472850 BAZ1AQ9NRL2 1556 aaPredicted RBP26.37■■□□□ 1.81
SSPO-204ENST00000472850 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
SSPO-204ENST00000472850 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
SSPO-204ENST00000472850 PCGF6Q9BYE7 350 aa26.22■■□□□ 1.79
SSPO-204ENST00000472850 PABPN1Q86U42 306 aaKnown RBP eCLIP26.18■■□□□ 1.78
SSPO-204ENST00000472850 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
SSPO-204ENST00000472850 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
SSPO-204ENST00000472850 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
SSPO-204ENST00000472850 EIF4G1Q04637 1599 aaKnown RBP26.02■■□□□ 1.76
SSPO-204ENST00000472850 CCDC88BA6NC98 1476 aa25.95■■□□□ 1.74
SSPO-204ENST00000472850 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
SSPO-204ENST00000472850 TRIM26Q12899 539 aaPredicted RBP25.91■■□□□ 1.74
SSPO-204ENST00000472850 EHMT2Q96KQ7 1210 aa25.88■■□□□ 1.73
SSPO-204ENST00000472850 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
SSPO-204ENST00000472850 PEG3Q9GZU2 1588 aa25.72■■□□□ 1.71
SSPO-204ENST00000472850 PPARGC1BQ86YN6 1023 aaKnown RBP25.62■■□□□ 1.69
SSPO-204ENST00000472850 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
SSPO-204ENST00000472850 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
SSPO-204ENST00000472850 ZEB1P37275 1124 aaPredicted RBP25.47■■□□□ 1.67
SSPO-204ENST00000472850 SOGA1O94964 1423 aa25.45■■□□□ 1.66
SSPO-204ENST00000472850 RUSC2Q8N2Y8 1516 aa25.37■■□□□ 1.65
SSPO-204ENST00000472850 WRNQ14191 1432 aaPredicted RBP eCLIP25.35■■□□□ 1.65
SSPO-204ENST00000472850 SYNJ1O43426 1573 aa25.3■■□□□ 1.64
SSPO-204ENST00000472850 CSRNP3Q8WYN3 585 aa25.23■■□□□ 1.63
SSPO-204ENST00000472850 EEA1Q15075 1411 aa25.21■■□□□ 1.63
SSPO-204ENST00000472850 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
SSPO-204ENST00000472850 CEP162Q5TB80 1403 aa25.14■■□□□ 1.62
SSPO-204ENST00000472850 HMGXB3Q12766 1538 aa25.14■■□□□ 1.62
SSPO-204ENST00000472850 TNIKQ9UKE5 1360 aa25.11■■□□□ 1.61
SSPO-204ENST00000472850 UBTFP17480 764 aaKnown RBP25.1■■□□□ 1.61
SSPO-204ENST00000472850 GOLGA3Q08378 1498 aa25.05■■□□□ 1.6
SSPO-204ENST00000472850 TOP2BQ02880 1626 aa25■■□□□ 1.59
SSPO-204ENST00000472850 TTBK1Q5TCY1 1321 aaPredicted RBP24.95■■□□□ 1.58
SSPO-204ENST00000472850 KIF21BO75037 1637 aa24.94■■□□□ 1.58
SSPO-204ENST00000472850 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
SSPO-204ENST00000472850 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
SSPO-204ENST00000472850 CFTRP13569 1480 aa24.86■■□□□ 1.57
SSPO-204ENST00000472850 CUX1P39880 1505 aa24.84■■□□□ 1.57
SSPO-204ENST00000472850 RAPGEF2Q9Y4G8 1499 aa24.84■■□□□ 1.57
SSPO-204ENST00000472850 CC2D2AQ9P2K1 1620 aa24.77■■□□□ 1.56
SSPO-204ENST00000472850 CLIP1P30622 1438 aa24.75■■□□□ 1.55
SSPO-204ENST00000472850 PRDM2Q13029 1718 aa24.73■■□□□ 1.55
SSPO-204ENST00000472850 RANGAP1P46060 587 aaPredicted RBP24.72■■□□□ 1.55
SSPO-204ENST00000472850 CCER1Q8TC90 406 aaPredicted RBP24.7■■□□□ 1.54
SSPO-204ENST00000472850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.69■■□□□ 1.54
SSPO-204ENST00000472850 CADPSQ9ULU8 1353 aa24.64■■□□□ 1.53
SSPO-204ENST00000472850 PRXQ9BXM0 1461 aa24.63■■□□□ 1.53
SSPO-204ENST00000472850 ERICH3Q5RHP9 1530 aa24.59■■□□□ 1.53
SSPO-204ENST00000472850 KIF27Q86VH2 1401 aa24.59■■□□□ 1.53
SSPO-204ENST00000472850 VPS8Q8N3P4 1428 aa24.59■■□□□ 1.53
SSPO-204ENST00000472850 CUX2O14529 1486 aa24.46■■□□□ 1.51
SSPO-204ENST00000472850 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.5
SSPO-204ENST00000472850 ARAP1Q96P48 1450 aa24.43■■□□□ 1.5
SSPO-204ENST00000472850 FANCD2Q9BXW9 1451 aa24.42■■□□□ 1.5
SSPO-204ENST00000472850 APLP2Q06481 763 aa24.41■■□□□ 1.5
SSPO-204ENST00000472850 NESP48681 1621 aa24.4■■□□□ 1.5
SSPO-204ENST00000472850 IGF1RP08069 1367 aa24.36■■□□□ 1.49
SSPO-204ENST00000472850 HNRNPUL2Q1KMD3 747 aaKnown RBP24.33■■□□□ 1.49
SSPO-204ENST00000472850 ARHGAP35Q9NRY4 1499 aa24.27■■□□□ 1.48
SSPO-204ENST00000472850 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
SSPO-204ENST00000472850 DIEXFQ68CQ4 756 aaKnown RBP24.26■■□□□ 1.47
SSPO-204ENST00000472850 SCAF1Q9H7N4 1312 aaKnown RBP24.26■■□□□ 1.47
SSPO-204ENST00000472850 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
SSPO-204ENST00000472850 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
SSPO-204ENST00000472850 DNAJC5BQ9UF47 199 aa24.24■■□□□ 1.47
SSPO-204ENST00000472850 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
SSPO-204ENST00000472850 KANK4Q5T7N3 995 aaPredicted RBP24.23■■□□□ 1.47
SSPO-204ENST00000472850 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.47
SSPO-204ENST00000472850 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
SSPO-204ENST00000472850 ABCA10Q8WWZ4 1543 aa24.14■■□□□ 1.45
SSPO-204ENST00000472850 ZNF316A6NFI3 1004 aaPredicted RBP24.13■■□□□ 1.45
SSPO-204ENST00000472850 ACIN1Q9UKV3 1341 aaKnown RBP24.12■■□□□ 1.45
SSPO-204ENST00000472850 URB2Q14146 1524 aaKnown RBP24.11■■□□□ 1.45
SSPO-204ENST00000472850 CENPBP07199 599 aaPredicted RBP24.03■■□□□ 1.44
SSPO-204ENST00000472850 PELP1Q8IZL8 1130 aaKnown RBP24.03■■□□□ 1.44
SSPO-204ENST00000472850 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
SSPO-204ENST00000472850 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
SSPO-204ENST00000472850 P3H3Q8IVL6 736 aa24.01■■□□□ 1.43
SSPO-204ENST00000472850 CLSPNQ9HAW4 1339 aa24■■□□□ 1.43
SSPO-204ENST00000472850 RRBP1Q9P2E9 1410 aaKnown RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms