RNA–Protein interactions for RNA: ENST00000472266.1

DMD-220, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 380 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-220ENST00000472266 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
DMD-220ENST00000472266 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
DMD-220ENST00000472266 NISCHQ9Y2I1 1504 aa15.05■□□□□ -0
DMD-220ENST00000472266 PHF23Q9BUL5 403 aaPredicted RBP14.46□□□□□ -0.09
DMD-220ENST00000472266 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
DMD-220ENST00000472266 CCDC180Q9P1Z9 1646 aa13.48□□□□□ -0.25
DMD-220ENST00000472266 FOXD1Q16676 465 aa13.34□□□□□ -0.27
DMD-220ENST00000472266 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
DMD-220ENST00000472266 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
DMD-220ENST00000472266 ABCC9O60706 1549 aa13.03□□□□□ -0.32
DMD-220ENST00000472266 ADRA2BP18089 450 aa12.79□□□□□ -0.36
DMD-220ENST00000472266 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
DMD-220ENST00000472266 MSH5O43196 834 aa12.68□□□□□ -0.38
DMD-220ENST00000472266 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
DMD-220ENST00000472266 NACADO15069 1562 aa12.66□□□□□ -0.38
DMD-220ENST00000472266 RB1CC1Q8TDY2 1594 aa12.65□□□□□ -0.38
DMD-220ENST00000472266 PIAS4Q8N2W9 510 aaPredicted RBP12.59□□□□□ -0.39
DMD-220ENST00000472266 DCAF1Q9Y4B6 1507 aa12.56□□□□□ -0.4
DMD-220ENST00000472266 ZCCHC6Q5VYS8 1495 aaKnown RBP12.54□□□□□ -0.4
DMD-220ENST00000472266 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
DMD-220ENST00000472266 UNC13AQ9UPW8 1703 aa12.33□□□□□ -0.44
DMD-220ENST00000472266 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.44
DMD-220ENST00000472266 BICRAQ9NZM4 1560 aa12.24□□□□□ -0.45
DMD-220ENST00000472266 SCRIBQ14160 1630 aa12.12□□□□□ -0.47
DMD-220ENST00000472266 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
DMD-220ENST00000472266 DNAJC5BQ9UF47 199 aa11.96□□□□□ -0.49
DMD-220ENST00000472266 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
DMD-220ENST00000472266 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
DMD-220ENST00000472266 CECR2Q9BXF3 1484 aa11.77□□□□□ -0.52
DMD-220ENST00000472266 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
DMD-220ENST00000472266 SCAF1Q9H7N4 1312 aaKnown RBP11.73□□□□□ -0.53
DMD-220ENST00000472266 BAZ1AQ9NRL2 1556 aaPredicted RBP11.69□□□□□ -0.54
DMD-220ENST00000472266 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
DMD-220ENST00000472266 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
DMD-220ENST00000472266 PEG3Q9GZU2 1588 aa11.66□□□□□ -0.54
DMD-220ENST00000472266 SMARCA2P51531 1590 aa11.65□□□□□ -0.54
DMD-220ENST00000472266 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
DMD-220ENST00000472266 HMGXB3Q12766 1538 aa11.63□□□□□ -0.55
DMD-220ENST00000472266 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
DMD-220ENST00000472266 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
DMD-220ENST00000472266 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
DMD-220ENST00000472266 DMRT2Q9Y5R5 561 aa11.45□□□□□ -0.58
DMD-220ENST00000472266 NCBP3Q53F19 620 aaKnown RBP11.44□□□□□ -0.58
DMD-220ENST00000472266 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
DMD-220ENST00000472266 RSF1Q96T23 1441 aaPredicted RBP11.41□□□□□ -0.58
DMD-220ENST00000472266 WIZO95785 1651 aa11.4□□□□□ -0.59
DMD-220ENST00000472266 KCNA4P22459 653 aa11.39□□□□□ -0.59
DMD-220ENST00000472266 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
DMD-220ENST00000472266 TOP2AP11388 1531 aaKnown RBP11.35□□□□□ -0.59
DMD-220ENST00000472266 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
DMD-220ENST00000472266 CUX2O14529 1486 aa11.27□□□□□ -0.6
DMD-220ENST00000472266 PDS5BQ9NTI5 1447 aa11.26□□□□□ -0.61
DMD-220ENST00000472266 ERCC6Q03468 1493 aa11.26□□□□□ -0.61
DMD-220ENST00000472266 NESP48681 1621 aa11.26□□□□□ -0.61
DMD-220ENST00000472266 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
DMD-220ENST00000472266 CFTRP13569 1480 aa11.23□□□□□ -0.61
DMD-220ENST00000472266 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
DMD-220ENST00000472266 THOC2Q8NI27 1593 aaKnown RBP11.2□□□□□ -0.62
DMD-220ENST00000472266 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
DMD-220ENST00000472266 KIF21AQ7Z4S6 1674 aa11.18□□□□□ -0.62
DMD-220ENST00000472266 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
DMD-220ENST00000472266 CCDC88BA6NC98 1476 aa11.16□□□□□ -0.62
DMD-220ENST00000472266 MRC2Q9UBG0 1479 aa11.13□□□□□ -0.63
DMD-220ENST00000472266 CEP164Q9UPV0 1460 aa11.13□□□□□ -0.63
DMD-220ENST00000472266 WDR62O43379 1518 aa11.13□□□□□ -0.63
DMD-220ENST00000472266 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
DMD-220ENST00000472266 CACNB1Q02641 598 aaPredicted RBP11.04□□□□□ -0.64
DMD-220ENST00000472266 ABCC8Q09428 1581 aa11.03□□□□□ -0.64
DMD-220ENST00000472266 DCAF8L1A6NGE4 600 aa11.03□□□□□ -0.64
DMD-220ENST00000472266 URB2Q14146 1524 aaKnown RBP11□□□□□ -0.65
DMD-220ENST00000472266 DNMBPQ6XZF7 1577 aa10.96□□□□□ -0.65
DMD-220ENST00000472266 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
DMD-220ENST00000472266 IFT140Q96RY7 1462 aa10.93□□□□□ -0.66
DMD-220ENST00000472266 SUPT5HO00267 1087 aaKnown RBP10.92□□□□□ -0.66
DMD-220ENST00000472266 WDR97A6NE52 1622 aa10.89□□□□□ -0.67
DMD-220ENST00000472266 DNAJC5Q9H3Z4 198 aa10.89□□□□□ -0.67
DMD-220ENST00000472266 SLC4A1APQ9BWU0 796 aaKnown RBP10.86□□□□□ -0.67
DMD-220ENST00000472266 TARBP1Q13395 1621 aaKnown RBP10.86□□□□□ -0.67
DMD-220ENST00000472266 POLA1P09884 1462 aaPredicted RBP10.86□□□□□ -0.67
DMD-220ENST00000472266 CUX1P39880 1505 aa10.84□□□□□ -0.67
DMD-220ENST00000472266 FGD5Q6ZNL6 1462 aa10.81□□□□□ -0.68
DMD-220ENST00000472266 EIF4G3O43432 1585 aaKnown RBP10.8□□□□□ -0.68
DMD-220ENST00000472266 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
DMD-220ENST00000472266 SOGA1O94964 1423 aa10.79□□□□□ -0.68
DMD-220ENST00000472266 TOP2BQ02880 1626 aa10.79□□□□□ -0.68
DMD-220ENST00000472266 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
DMD-220ENST00000472266 WRNQ14191 1432 aaPredicted RBP eCLIP10.76□□□□□ -0.69
DMD-220ENST00000472266 ABCA10Q8WWZ4 1543 aa10.76□□□□□ -0.69
DMD-220ENST00000472266 RNF39Q9H2S5 420 aa10.76□□□□□ -0.69
DMD-220ENST00000472266 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
DMD-220ENST00000472266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.72□□□□□ -0.69
DMD-220ENST00000472266 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.69
DMD-220ENST00000472266 MAGI1Q96QZ7 1491 aaPredicted RBP10.72□□□□□ -0.69
DMD-220ENST00000472266 ABCA5Q8WWZ7 1642 aa10.72□□□□□ -0.69
DMD-220ENST00000472266 SYNJ1O43426 1573 aa10.71□□□□□ -0.69
DMD-220ENST00000472266 GRIN2BQ13224 1484 aa10.71□□□□□ -0.69
DMD-220ENST00000472266 OSCARQ8IYS5 282 aa10.71□□□□□ -0.69
DMD-220ENST00000472266 GAPVD1Q14C86 1478 aa10.68□□□□□ -0.7
DMD-220ENST00000472266 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
DMD-220ENST00000472266 PBRM1Q86U86 1689 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms