RNA–Protein interactions for RNA: ENST00000471618.5

CNTNAP4-204, Transcript of contactin associated protein like 4, humanhuman

TSL 2

Gene CNTNAP4, Length 2,338 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4-204ENST00000471618 NISCHQ9Y2I1 1504 aa15.52■□□□□ 0.08
CNTNAP4-204ENST00000471618 ABCC9O60706 1549 aa13.98□□□□□ -0.17
CNTNAP4-204ENST00000471618 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
CNTNAP4-204ENST00000471618 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
CNTNAP4-204ENST00000471618 PELP1Q8IZL8 1130 aaKnown RBP13.22□□□□□ -0.29
CNTNAP4-204ENST00000471618 AEBP2Q6ZN18 517 aaPredicted RBP13.18□□□□□ -0.3
CNTNAP4-204ENST00000471618 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
CNTNAP4-204ENST00000471618 NACADO15069 1562 aa13.14□□□□□ -0.31
CNTNAP4-204ENST00000471618 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
CNTNAP4-204ENST00000471618 MYT1Q01538 1121 aa13.05□□□□□ -0.32
CNTNAP4-204ENST00000471618 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
CNTNAP4-204ENST00000471618 UNC13AQ9UPW8 1703 aa12.97□□□□□ -0.33
CNTNAP4-204ENST00000471618 MYO15BQ96JP2 1530 aa12.94□□□□□ -0.34
CNTNAP4-204ENST00000471618 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
CNTNAP4-204ENST00000471618 ZCCHC6Q5VYS8 1495 aaKnown RBP12.87□□□□□ -0.35
CNTNAP4-204ENST00000471618 DCAF1Q9Y4B6 1507 aa12.79□□□□□ -0.36
CNTNAP4-204ENST00000471618 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
CNTNAP4-204ENST00000471618 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
CNTNAP4-204ENST00000471618 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
CNTNAP4-204ENST00000471618 TTBK1Q5TCY1 1321 aaPredicted RBP12.6□□□□□ -0.39
CNTNAP4-204ENST00000471618 CECR2Q9BXF3 1484 aa12.57□□□□□ -0.4
CNTNAP4-204ENST00000471618 EIF4G1Q04637 1599 aaKnown RBP12.57□□□□□ -0.4
CNTNAP4-204ENST00000471618 CHIC1Q5VXU3 224 aa12.49□□□□□ -0.41
CNTNAP4-204ENST00000471618 PRKCSHP14314 528 aaPredicted RBP12.17□□□□□ -0.46
CNTNAP4-204ENST00000471618 HRCP23327 699 aa12.16□□□□□ -0.46
CNTNAP4-204ENST00000471618 NCAPD3P42695 1498 aa12.15□□□□□ -0.46
CNTNAP4-204ENST00000471618 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
CNTNAP4-204ENST00000471618 SMARCA4P51532 1647 aa12.11□□□□□ -0.47
CNTNAP4-204ENST00000471618 SMARCA2P51531 1590 aa12.07□□□□□ -0.48
CNTNAP4-204ENST00000471618 HMGXB3Q12766 1538 aa12.05□□□□□ -0.48
CNTNAP4-204ENST00000471618 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
CNTNAP4-204ENST00000471618 ERCC6Q03468 1493 aa12.04□□□□□ -0.48
CNTNAP4-204ENST00000471618 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
CNTNAP4-204ENST00000471618 NESP48681 1621 aa12.02□□□□□ -0.49
CNTNAP4-204ENST00000471618 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
CNTNAP4-204ENST00000471618 CUX2O14529 1486 aa12□□□□□ -0.49
CNTNAP4-204ENST00000471618 MROH2BQ7Z745 1585 aa11.99□□□□□ -0.49
CNTNAP4-204ENST00000471618 APLP2Q06481 763 aa11.98□□□□□ -0.49
CNTNAP4-204ENST00000471618 ERICH6Q7L0X2 663 aa11.98□□□□□ -0.49
CNTNAP4-204ENST00000471618 PEG3Q9GZU2 1588 aa11.97□□□□□ -0.49
CNTNAP4-204ENST00000471618 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
CNTNAP4-204ENST00000471618 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
CNTNAP4-204ENST00000471618 THOC2Q8NI27 1593 aaKnown RBP11.87□□□□□ -0.51
CNTNAP4-204ENST00000471618 LAMC3Q9Y6N6 1575 aa11.87□□□□□ -0.51
CNTNAP4-204ENST00000471618 SLC24A1O60721 1099 aa11.86□□□□□ -0.51
CNTNAP4-204ENST00000471618 WIZO95785 1651 aa11.84□□□□□ -0.51
CNTNAP4-204ENST00000471618 KIF21AQ7Z4S6 1674 aa11.83□□□□□ -0.52
CNTNAP4-204ENST00000471618 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
CNTNAP4-204ENST00000471618 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
CNTNAP4-204ENST00000471618 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
CNTNAP4-204ENST00000471618 MRC2Q9UBG0 1479 aa11.72□□□□□ -0.53
CNTNAP4-204ENST00000471618 FAM9AQ8IZU1 332 aaPredicted RBP11.71□□□□□ -0.53
CNTNAP4-204ENST00000471618 WDR62O43379 1518 aa11.69□□□□□ -0.54
CNTNAP4-204ENST00000471618 FANCD2Q9BXW9 1451 aa11.67□□□□□ -0.54
CNTNAP4-204ENST00000471618 CEP164Q9UPV0 1460 aa11.67□□□□□ -0.54
CNTNAP4-204ENST00000471618 PPARGC1BQ86YN6 1023 aaKnown RBP11.66□□□□□ -0.54
CNTNAP4-204ENST00000471618 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
CNTNAP4-204ENST00000471618 CFTRP13569 1480 aa11.65□□□□□ -0.54
CNTNAP4-204ENST00000471618 URB2Q14146 1524 aaKnown RBP11.59□□□□□ -0.55
CNTNAP4-204ENST00000471618 CCDC88BA6NC98 1476 aa11.55□□□□□ -0.56
CNTNAP4-204ENST00000471618 CENPBP07199 599 aaPredicted RBP11.54□□□□□ -0.56
CNTNAP4-204ENST00000471618 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
CNTNAP4-204ENST00000471618 PRDM2Q13029 1718 aa11.5□□□□□ -0.57
CNTNAP4-204ENST00000471618 OSCARQ8IYS5 282 aa11.46□□□□□ -0.57
CNTNAP4-204ENST00000471618 ZNF608Q9ULD9 1512 aaPredicted RBP11.46□□□□□ -0.58
CNTNAP4-204ENST00000471618 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
CNTNAP4-204ENST00000471618 DAXXQ9UER7 740 aaPredicted RBP11.43□□□□□ -0.58
CNTNAP4-204ENST00000471618 IFT140Q96RY7 1462 aa11.43□□□□□ -0.58
CNTNAP4-204ENST00000471618 ACIN1Q9UKV3 1341 aaKnown RBP11.41□□□□□ -0.58
CNTNAP4-204ENST00000471618 DNMBPQ6XZF7 1577 aa11.39□□□□□ -0.59
CNTNAP4-204ENST00000471618 EIF4G3O43432 1585 aaKnown RBP11.36□□□□□ -0.59
CNTNAP4-204ENST00000471618 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
CNTNAP4-204ENST00000471618 AQRO60306 1485 aaKnown RBP eCLIP11.35□□□□□ -0.59
CNTNAP4-204ENST00000471618 TARBP1Q13395 1621 aaKnown RBP11.34□□□□□ -0.59
CNTNAP4-204ENST00000471618 RIMBP3CA6NJZ7 1639 aa11.33□□□□□ -0.6
CNTNAP4-204ENST00000471618 RIMBP3BA6NNM3 1639 aa11.33□□□□□ -0.6
CNTNAP4-204ENST00000471618 RIMBP3Q9UFD9 1639 aa11.33□□□□□ -0.6
CNTNAP4-204ENST00000471618 POLA1P09884 1462 aaPredicted RBP11.33□□□□□ -0.6
CNTNAP4-204ENST00000471618 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
CNTNAP4-204ENST00000471618 ANP32EQ9BTT0 268 aa11.3□□□□□ -0.6
CNTNAP4-204ENST00000471618 PCGF6Q9BYE7 350 aa11.3□□□□□ -0.6
CNTNAP4-204ENST00000471618 ARHGEF11O15085 1522 aa11.29□□□□□ -0.6
CNTNAP4-204ENST00000471618 GTF3C3Q9Y5Q9 886 aa11.29□□□□□ -0.6
CNTNAP4-204ENST00000471618 CHD1O14646 1710 aa11.28□□□□□ -0.6
CNTNAP4-204ENST00000471618 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.6
CNTNAP4-204ENST00000471618 SOGA1O94964 1423 aa11.27□□□□□ -0.61
CNTNAP4-204ENST00000471618 FBLN2P98095 1184 aa11.26□□□□□ -0.61
CNTNAP4-204ENST00000471618 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
CNTNAP4-204ENST00000471618 FGD5Q6ZNL6 1462 aa11.26□□□□□ -0.61
CNTNAP4-204ENST00000471618 CUX1P39880 1505 aa11.26□□□□□ -0.61
CNTNAP4-204ENST00000471618 CYB5RLQ6IPT4 315 aa11.23□□□□□ -0.61
CNTNAP4-204ENST00000471618 SNAPC4Q5SXM2 1469 aa11.22□□□□□ -0.61
CNTNAP4-204ENST00000471618 SUPT5HO00267 1087 aaKnown RBP11.22□□□□□ -0.61
CNTNAP4-204ENST00000471618 ZEB1P37275 1124 aaPredicted RBP11.21□□□□□ -0.61
CNTNAP4-204ENST00000471618 EIF5BO60841 1220 aaKnown RBP11.21□□□□□ -0.62
CNTNAP4-204ENST00000471618 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
CNTNAP4-204ENST00000471618 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
CNTNAP4-204ENST00000471618 GRIN2BQ13224 1484 aa11.16□□□□□ -0.62
CNTNAP4-204ENST00000471618 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
CNTNAP4-204ENST00000471618 CLASP1Q7Z460 1538 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms