RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 NISCHQ9Y2I1 1504 aa36.71■■■■□ 3.47
PGAP1-208ENST00000470179 CCDC180Q9P1Z9 1646 aa32.38■■■□□ 2.77
PGAP1-208ENST00000470179 ABCC9O60706 1549 aa30.79■■■□□ 2.52
PGAP1-208ENST00000470179 ZCCHC6Q5VYS8 1495 aaKnown RBP30.75■■■□□ 2.51
PGAP1-208ENST00000470179 DCAF1Q9Y4B6 1507 aa30.51■■■□□ 2.48
PGAP1-208ENST00000470179 MYO15BQ96JP2 1530 aa30.4■■■□□ 2.46
PGAP1-208ENST00000470179 NACADO15069 1562 aa30.24■■■□□ 2.43
PGAP1-208ENST00000470179 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
PGAP1-208ENST00000470179 RB1CC1Q8TDY2 1594 aa30.06■■■□□ 2.4
PGAP1-208ENST00000470179 SCRIBQ14160 1630 aa29.45■■■□□ 2.3
PGAP1-208ENST00000470179 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
PGAP1-208ENST00000470179 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
PGAP1-208ENST00000470179 BICRAQ9NZM4 1560 aa29.15■■■□□ 2.26
PGAP1-208ENST00000470179 SUPT5HO00267 1087 aaKnown RBP28.87■■■□□ 2.21
PGAP1-208ENST00000470179 PABPN1Q86U42 306 aaKnown RBP eCLIP28.85■■■□□ 2.21
PGAP1-208ENST00000470179 CECR2Q9BXF3 1484 aa28.45■■■□□ 2.15
PGAP1-208ENST00000470179 BAZ1AQ9NRL2 1556 aaPredicted RBP28.4■■■□□ 2.14
PGAP1-208ENST00000470179 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
PGAP1-208ENST00000470179 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
PGAP1-208ENST00000470179 MROH2BQ7Z745 1585 aa28.26■■■□□ 2.12
PGAP1-208ENST00000470179 RSF1Q96T23 1441 aaPredicted RBP28.22■■■□□ 2.11
PGAP1-208ENST00000470179 PEG3Q9GZU2 1588 aa28.12■■■□□ 2.09
PGAP1-208ENST00000470179 PPARGC1BQ86YN6 1023 aaKnown RBP28.05■■■□□ 2.08
PGAP1-208ENST00000470179 PCGF6Q9BYE7 350 aa28.04■■■□□ 2.08
PGAP1-208ENST00000470179 SMARCA2P51531 1590 aa28■■■□□ 2.07
PGAP1-208ENST00000470179 WIZO95785 1651 aa27.98■■■□□ 2.07
PGAP1-208ENST00000470179 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
PGAP1-208ENST00000470179 CC2D2AQ9P2K1 1620 aa27.97■■■□□ 2.07
PGAP1-208ENST00000470179 HRCP23327 699 aa27.94■■■□□ 2.06
PGAP1-208ENST00000470179 NCAPD3P42695 1498 aa27.9■■■□□ 2.06
PGAP1-208ENST00000470179 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
PGAP1-208ENST00000470179 HMGXB3Q12766 1538 aa27.84■■■□□ 2.05
PGAP1-208ENST00000470179 TOP2AP11388 1531 aaKnown RBP27.78■■■□□ 2.04
PGAP1-208ENST00000470179 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
PGAP1-208ENST00000470179 DNAJC5BQ9UF47 199 aa27.62■■■□□ 2.01
PGAP1-208ENST00000470179 LOC105371045A0A1W2PR82 267 aa27.6■■■□□ 2.01
PGAP1-208ENST00000470179 CCDC88BA6NC98 1476 aa27.42■■□□□ 1.98
PGAP1-208ENST00000470179 EHMT2Q96KQ7 1210 aa27.16■■□□□ 1.94
PGAP1-208ENST00000470179 CFTRP13569 1480 aa27.1■■□□□ 1.93
PGAP1-208ENST00000470179 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
PGAP1-208ENST00000470179 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
PGAP1-208ENST00000470179 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
PGAP1-208ENST00000470179 NESP48681 1621 aa26.88■■□□□ 1.89
PGAP1-208ENST00000470179 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
PGAP1-208ENST00000470179 PDS5BQ9NTI5 1447 aa26.78■■□□□ 1.88
PGAP1-208ENST00000470179 TRIM26Q12899 539 aaPredicted RBP26.75■■□□□ 1.87
PGAP1-208ENST00000470179 FANCD2Q9BXW9 1451 aa26.73■■□□□ 1.87
PGAP1-208ENST00000470179 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
PGAP1-208ENST00000470179 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
PGAP1-208ENST00000470179 ABCC8Q09428 1581 aa26.57■■□□□ 1.84
PGAP1-208ENST00000470179 WRNQ14191 1432 aaPredicted RBP eCLIP26.56■■□□□ 1.84
PGAP1-208ENST00000470179 BIVM-ERCC5R4GMW8 1640 aa26.49■■□□□ 1.83
PGAP1-208ENST00000470179 TOP2BQ02880 1626 aa26.48■■□□□ 1.83
PGAP1-208ENST00000470179 CUX1P39880 1505 aa26.48■■□□□ 1.83
PGAP1-208ENST00000470179 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
PGAP1-208ENST00000470179 SYNJ1O43426 1573 aa26.47■■□□□ 1.83
PGAP1-208ENST00000470179 DNMBPQ6XZF7 1577 aa26.47■■□□□ 1.83
PGAP1-208ENST00000470179 MRC2Q9UBG0 1479 aa26.46■■□□□ 1.83
PGAP1-208ENST00000470179 SCAF1Q9H7N4 1312 aaKnown RBP26.46■■□□□ 1.83
PGAP1-208ENST00000470179 URB2Q14146 1524 aaKnown RBP26.44■■□□□ 1.82
PGAP1-208ENST00000470179 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
PGAP1-208ENST00000470179 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
PGAP1-208ENST00000470179 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
PGAP1-208ENST00000470179 WDR62O43379 1518 aa26.39■■□□□ 1.82
PGAP1-208ENST00000470179 TTBK1Q5TCY1 1321 aaPredicted RBP26.31■■□□□ 1.8
PGAP1-208ENST00000470179 FGD5Q6ZNL6 1462 aa26.25■■□□□ 1.79
PGAP1-208ENST00000470179 POLA1P09884 1462 aaPredicted RBP26.23■■□□□ 1.79
PGAP1-208ENST00000470179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.19■■□□□ 1.78
PGAP1-208ENST00000470179 CUX2O14529 1486 aa26.13■■□□□ 1.77
PGAP1-208ENST00000470179 TARBP1Q13395 1621 aaKnown RBP26.11■■□□□ 1.77
PGAP1-208ENST00000470179 SOGA1O94964 1423 aa26.11■■□□□ 1.77
PGAP1-208ENST00000470179 ABCA10Q8WWZ4 1543 aa26.1■■□□□ 1.77
PGAP1-208ENST00000470179 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
PGAP1-208ENST00000470179 IFT140Q96RY7 1462 aa26.08■■□□□ 1.77
PGAP1-208ENST00000470179 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
PGAP1-208ENST00000470179 ZEB1P37275 1124 aaPredicted RBP26.03■■□□□ 1.76
PGAP1-208ENST00000470179 EEA1Q15075 1411 aa26.01■■□□□ 1.75
PGAP1-208ENST00000470179 KIF27Q86VH2 1401 aa25.95■■□□□ 1.74
PGAP1-208ENST00000470179 NEUROD1Q13562 356 aa25.93■■□□□ 1.74
PGAP1-208ENST00000470179 ABCA5Q8WWZ7 1642 aa25.93■■□□□ 1.74
PGAP1-208ENST00000470179 CCER1Q8TC90 406 aaPredicted RBP25.9■■□□□ 1.74
PGAP1-208ENST00000470179 RUSC2Q8N2Y8 1516 aa25.9■■□□□ 1.74
PGAP1-208ENST00000470179 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
PGAP1-208ENST00000470179 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
PGAP1-208ENST00000470179 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
PGAP1-208ENST00000470179 ERICH3Q5RHP9 1530 aa25.81■■□□□ 1.72
PGAP1-208ENST00000470179 EIF4G3O43432 1585 aaKnown RBP25.81■■□□□ 1.72
PGAP1-208ENST00000470179 IGF1RP08069 1367 aa25.78■■□□□ 1.72
PGAP1-208ENST00000470179 AQRO60306 1485 aaKnown RBP eCLIP25.77■■□□□ 1.72
PGAP1-208ENST00000470179 CSRNP3Q8WYN3 585 aa25.77■■□□□ 1.72
PGAP1-208ENST00000470179 PBRM1Q86U86 1689 aa25.75■■□□□ 1.71
PGAP1-208ENST00000470179 GRIN2BQ13224 1484 aa25.75■■□□□ 1.71
PGAP1-208ENST00000470179 GTF3C3Q9Y5Q9 886 aa25.72■■□□□ 1.71
PGAP1-208ENST00000470179 CUL7Q14999 1698 aa25.7■■□□□ 1.71
PGAP1-208ENST00000470179 ACIN1Q9UKV3 1341 aaKnown RBP25.7■■□□□ 1.7
PGAP1-208ENST00000470179 PRXQ9BXM0 1461 aa25.7■■□□□ 1.7
PGAP1-208ENST00000470179 PELP1Q8IZL8 1130 aaKnown RBP25.68■■□□□ 1.7
PGAP1-208ENST00000470179 KIF21BO75037 1637 aa25.67■■□□□ 1.7
PGAP1-208ENST00000470179 YTHDC1Q96MU7 727 aaKnown RBP25.64■■□□□ 1.69
PGAP1-208ENST00000470179 MAGI1Q96QZ7 1491 aaPredicted RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms