RNA–Protein interactions for RNA: ENST00000470027.7

PAX6-214, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 3,587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-214ENST00000470027 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
PAX6-214ENST00000470027 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.4
PAX6-214ENST00000470027 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
PAX6-214ENST00000470027 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
PAX6-214ENST00000470027 SHROOM4Q9ULL8 1493 aa16.72■□□□□ 0.27
PAX6-214ENST00000470027 DCAF1Q9Y4B6 1507 aa16.58■□□□□ 0.24
PAX6-214ENST00000470027 ABCC9O60706 1549 aa16.41■□□□□ 0.22
PAX6-214ENST00000470027 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
PAX6-214ENST00000470027 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
PAX6-214ENST00000470027 NACADO15069 1562 aa16.21■□□□□ 0.19
PAX6-214ENST00000470027 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
PAX6-214ENST00000470027 RB1CC1Q8TDY2 1594 aa16.06■□□□□ 0.16
PAX6-214ENST00000470027 UNC13AQ9UPW8 1703 aa16.03■□□□□ 0.16
PAX6-214ENST00000470027 BICRAQ9NZM4 1560 aa15.73■□□□□ 0.11
PAX6-214ENST00000470027 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
PAX6-214ENST00000470027 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
PAX6-214ENST00000470027 CECR2Q9BXF3 1484 aa15.6■□□□□ 0.09
PAX6-214ENST00000470027 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
PAX6-214ENST00000470027 MROH2BQ7Z745 1585 aa15.52■□□□□ 0.08
PAX6-214ENST00000470027 WIZO95785 1651 aa15.45■□□□□ 0.06
PAX6-214ENST00000470027 SMARCA4P51532 1647 aa15.44■□□□□ 0.06
PAX6-214ENST00000470027 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
PAX6-214ENST00000470027 FAM9AQ8IZU1 332 aaPredicted RBP15.3■□□□□ 0.04
PAX6-214ENST00000470027 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
PAX6-214ENST00000470027 TOP2AP11388 1531 aaKnown RBP15.2■□□□□ 0.02
PAX6-214ENST00000470027 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
PAX6-214ENST00000470027 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
PAX6-214ENST00000470027 ATAD2BQ9ULI0 1458 aa15.11■□□□□ 0.01
PAX6-214ENST00000470027 HRCP23327 699 aa15.09■□□□□ 0.01
PAX6-214ENST00000470027 PCGF6Q9BYE7 350 aa15.09■□□□□ 0.01
PAX6-214ENST00000470027 CCDC88BA6NC98 1476 aa15.04■□□□□ -0
PAX6-214ENST00000470027 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
PAX6-214ENST00000470027 HMGXB3Q12766 1538 aa14.98□□□□□ -0.01
PAX6-214ENST00000470027 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
PAX6-214ENST00000470027 RANGAP1P46060 587 aaPredicted RBP14.96□□□□□ -0.01
PAX6-214ENST00000470027 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
PAX6-214ENST00000470027 CC2D2AQ9P2K1 1620 aa14.95□□□□□ -0.02
PAX6-214ENST00000470027 PPARGC1BQ86YN6 1023 aaKnown RBP14.93□□□□□ -0.02
PAX6-214ENST00000470027 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
PAX6-214ENST00000470027 TTBK1Q5TCY1 1321 aaPredicted RBP14.88□□□□□ -0.03
PAX6-214ENST00000470027 LOC105371045A0A1W2PR82 267 aa14.84□□□□□ -0.03
PAX6-214ENST00000470027 PELP1Q8IZL8 1130 aaKnown RBP14.82□□□□□ -0.04
PAX6-214ENST00000470027 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
PAX6-214ENST00000470027 PRDM2Q13029 1718 aa14.77□□□□□ -0.05
PAX6-214ENST00000470027 CFTRP13569 1480 aa14.65□□□□□ -0.06
PAX6-214ENST00000470027 SYNJ1O43426 1573 aa14.65□□□□□ -0.06
PAX6-214ENST00000470027 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
PAX6-214ENST00000470027 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
PAX6-214ENST00000470027 TOP2BQ02880 1626 aa14.56□□□□□ -0.08
PAX6-214ENST00000470027 WRNQ14191 1432 aaPredicted RBP eCLIP14.55□□□□□ -0.08
PAX6-214ENST00000470027 UBTFP17480 764 aaKnown RBP14.54□□□□□ -0.08
PAX6-214ENST00000470027 CADPSQ9ULU8 1353 aa14.52□□□□□ -0.08
PAX6-214ENST00000470027 CUX1P39880 1505 aa14.51□□□□□ -0.09
PAX6-214ENST00000470027 NESP48681 1621 aa14.5□□□□□ -0.09
PAX6-214ENST00000470027 MYT1Q01538 1121 aa14.49□□□□□ -0.09
PAX6-214ENST00000470027 TRIM26Q12899 539 aaPredicted RBP14.48□□□□□ -0.09
PAX6-214ENST00000470027 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
PAX6-214ENST00000470027 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.09
PAX6-214ENST00000470027 SOGA1O94964 1423 aa14.46□□□□□ -0.09
PAX6-214ENST00000470027 KIF21AQ7Z4S6 1674 aa14.43□□□□□ -0.1
PAX6-214ENST00000470027 ATP1B4Q9UN42 357 aaPredicted RBP14.42□□□□□ -0.1
PAX6-214ENST00000470027 FANCD2Q9BXW9 1451 aa14.4□□□□□ -0.1
PAX6-214ENST00000470027 ZEB1P37275 1124 aaPredicted RBP14.36□□□□□ -0.11
PAX6-214ENST00000470027 DNMBPQ6XZF7 1577 aa14.32□□□□□ -0.12
PAX6-214ENST00000470027 EEA1Q15075 1411 aa14.31□□□□□ -0.12
PAX6-214ENST00000470027 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
PAX6-214ENST00000470027 WDR97A6NE52 1622 aa14.29□□□□□ -0.12
PAX6-214ENST00000470027 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
PAX6-214ENST00000470027 KIF21BO75037 1637 aa14.28□□□□□ -0.12
PAX6-214ENST00000470027 FGD5Q6ZNL6 1462 aa14.28□□□□□ -0.12
PAX6-214ENST00000470027 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
PAX6-214ENST00000470027 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
PAX6-214ENST00000470027 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
PAX6-214ENST00000470027 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
PAX6-214ENST00000470027 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
PAX6-214ENST00000470027 FBLN2P98095 1184 aa14.21□□□□□ -0.14
PAX6-214ENST00000470027 P3H3Q8IVL6 736 aa14.18□□□□□ -0.14
PAX6-214ENST00000470027 TARBP1Q13395 1621 aaKnown RBP14.17□□□□□ -0.14
PAX6-214ENST00000470027 RAD54L2Q9Y4B4 1467 aa14.17□□□□□ -0.14
PAX6-214ENST00000470027 PRXQ9BXM0 1461 aa14.17□□□□□ -0.14
PAX6-214ENST00000470027 RAPGEF2Q9Y4G8 1499 aa14.17□□□□□ -0.14
PAX6-214ENST00000470027 ABCA10Q8WWZ4 1543 aa14.16□□□□□ -0.14
PAX6-214ENST00000470027 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
PAX6-214ENST00000470027 ARID3CA6NKF2 412 aa14.15□□□□□ -0.14
PAX6-214ENST00000470027 THOC2Q8NI27 1593 aaKnown RBP14.15□□□□□ -0.14
PAX6-214ENST00000470027 ERICH3Q5RHP9 1530 aa14.14□□□□□ -0.15
PAX6-214ENST00000470027 APLP2Q06481 763 aa14.14□□□□□ -0.15
PAX6-214ENST00000470027 ABCA5Q8WWZ7 1642 aa14.14□□□□□ -0.15
PAX6-214ENST00000470027 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
PAX6-214ENST00000470027 CUX2O14529 1486 aa14.13□□□□□ -0.15
PAX6-214ENST00000470027 WDR62O43379 1518 aa14.13□□□□□ -0.15
PAX6-214ENST00000470027 TNIKQ9UKE5 1360 aa14.12□□□□□ -0.15
PAX6-214ENST00000470027 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
PAX6-214ENST00000470027 IGF1RP08069 1367 aa14.08□□□□□ -0.16
PAX6-214ENST00000470027 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
PAX6-214ENST00000470027 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
PAX6-214ENST00000470027 ITGAEP38570 1179 aa14.07□□□□□ -0.16
PAX6-214ENST00000470027 PBRM1Q86U86 1689 aa14.06□□□□□ -0.16
PAX6-214ENST00000470027 CUL7Q14999 1698 aa14.03□□□□□ -0.16
PAX6-214ENST00000470027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms