RNA–Protein interactions for RNA: ENST00000470012.1

TPRKB-206, Transcript of TP53RK binding protein, humanhuman

TSL 4

Gene TPRKB, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKB-206ENST00000470012 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
TPRKB-206ENST00000470012 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
TPRKB-206ENST00000470012 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
TPRKB-206ENST00000470012 ABCC9O60706 1549 aa19.61■□□□□ 0.73
TPRKB-206ENST00000470012 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
TPRKB-206ENST00000470012 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
TPRKB-206ENST00000470012 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
TPRKB-206ENST00000470012 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
TPRKB-206ENST00000470012 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
TPRKB-206ENST00000470012 POTEDQ86YR6 584 aa18.55■□□□□ 0.56
TPRKB-206ENST00000470012 FOXD1Q16676 465 aa18.27■□□□□ 0.52
TPRKB-206ENST00000470012 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
TPRKB-206ENST00000470012 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
TPRKB-206ENST00000470012 NACADO15069 1562 aa17.98■□□□□ 0.47
TPRKB-206ENST00000470012 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
TPRKB-206ENST00000470012 DCAF8L2P0C7V8 631 aa17.81■□□□□ 0.44
TPRKB-206ENST00000470012 MYO15BQ96JP2 1530 aa17.8■□□□□ 0.44
TPRKB-206ENST00000470012 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
TPRKB-206ENST00000470012 BICRAQ9NZM4 1560 aa17.67■□□□□ 0.42
TPRKB-206ENST00000470012 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
TPRKB-206ENST00000470012 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
TPRKB-206ENST00000470012 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
TPRKB-206ENST00000470012 MSH5O43196 834 aa17.51■□□□□ 0.39
TPRKB-206ENST00000470012 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
TPRKB-206ENST00000470012 CUX2O14529 1486 aa17.41■□□□□ 0.38
TPRKB-206ENST00000470012 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
TPRKB-206ENST00000470012 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
TPRKB-206ENST00000470012 SCRIBQ14160 1630 aa17.24■□□□□ 0.35
TPRKB-206ENST00000470012 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
TPRKB-206ENST00000470012 PIAS4Q8N2W9 510 aaPredicted RBP16.87■□□□□ 0.29
TPRKB-206ENST00000470012 THOC2Q8NI27 1593 aaKnown RBP16.57■□□□□ 0.24
TPRKB-206ENST00000470012 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
TPRKB-206ENST00000470012 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
TPRKB-206ENST00000470012 NESP48681 1621 aa16.51■□□□□ 0.23
TPRKB-206ENST00000470012 ATAD2BQ9ULI0 1458 aa16.49■□□□□ 0.23
TPRKB-206ENST00000470012 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
TPRKB-206ENST00000470012 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
TPRKB-206ENST00000470012 HMGXB3Q12766 1538 aa16.47■□□□□ 0.23
TPRKB-206ENST00000470012 OSCARQ8IYS5 282 aa16.44■□□□□ 0.22
TPRKB-206ENST00000470012 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
TPRKB-206ENST00000470012 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
TPRKB-206ENST00000470012 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
TPRKB-206ENST00000470012 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
TPRKB-206ENST00000470012 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
TPRKB-206ENST00000470012 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
TPRKB-206ENST00000470012 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
TPRKB-206ENST00000470012 ADRA2BP18089 450 aa16.26■□□□□ 0.19
TPRKB-206ENST00000470012 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
TPRKB-206ENST00000470012 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
TPRKB-206ENST00000470012 PDS5BQ9NTI5 1447 aa16.24■□□□□ 0.19
TPRKB-206ENST00000470012 KIF21AQ7Z4S6 1674 aa16.23■□□□□ 0.19
TPRKB-206ENST00000470012 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
TPRKB-206ENST00000470012 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
TPRKB-206ENST00000470012 ILDR1Q86SU0 546 aaPredicted RBP16.14■□□□□ 0.17
TPRKB-206ENST00000470012 ARHGEF11O15085 1522 aa16.14■□□□□ 0.17
TPRKB-206ENST00000470012 WDR62O43379 1518 aa16.12■□□□□ 0.17
TPRKB-206ENST00000470012 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
TPRKB-206ENST00000470012 CADPSQ9ULU8 1353 aa16.07■□□□□ 0.16
TPRKB-206ENST00000470012 WIZO95785 1651 aa16.05■□□□□ 0.16
TPRKB-206ENST00000470012 RSF1Q96T23 1441 aaPredicted RBP15.99■□□□□ 0.15
TPRKB-206ENST00000470012 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
TPRKB-206ENST00000470012 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
TPRKB-206ENST00000470012 CFTRP13569 1480 aa15.9■□□□□ 0.14
TPRKB-206ENST00000470012 ARAP1Q96P48 1450 aa15.9■□□□□ 0.14
TPRKB-206ENST00000470012 FANCD2Q9BXW9 1451 aa15.87■□□□□ 0.13
TPRKB-206ENST00000470012 PRDM2Q13029 1718 aa15.75■□□□□ 0.11
TPRKB-206ENST00000470012 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.11
TPRKB-206ENST00000470012 URB2Q14146 1524 aaKnown RBP15.68■□□□□ 0.1
TPRKB-206ENST00000470012 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
TPRKB-206ENST00000470012 ZNF608Q9ULD9 1512 aaPredicted RBP15.63■□□□□ 0.09
TPRKB-206ENST00000470012 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
TPRKB-206ENST00000470012 TOPBP1Q92547 1522 aa15.56■□□□□ 0.08
TPRKB-206ENST00000470012 CHD1O14646 1710 aa15.55■□□□□ 0.08
TPRKB-206ENST00000470012 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
TPRKB-206ENST00000470012 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
TPRKB-206ENST00000470012 FBLN2P98095 1184 aa15.51■□□□□ 0.07
TPRKB-206ENST00000470012 EIF4G3O43432 1585 aaKnown RBP15.48■□□□□ 0.07
TPRKB-206ENST00000470012 KDM4FA0A1W2PPD8 638 aa15.46■□□□□ 0.07
TPRKB-206ENST00000470012 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
TPRKB-206ENST00000470012 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
TPRKB-206ENST00000470012 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
TPRKB-206ENST00000470012 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
TPRKB-206ENST00000470012 FBXO41Q8TF61 875 aa15.37■□□□□ 0.05
TPRKB-206ENST00000470012 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.052e-9■■■■■ 39.4
TPRKB-206ENST00000470012 SOGA1O94964 1423 aa15.35■□□□□ 0.05
TPRKB-206ENST00000470012 ERCC6L2Q5T890 1561 aa15.35■□□□□ 0.05
TPRKB-206ENST00000470012 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
TPRKB-206ENST00000470012 DMRT2Q9Y5R5 561 aa15.34■□□□□ 0.05
TPRKB-206ENST00000470012 SUPT5HO00267 1087 aaKnown RBP15.32■□□□□ 0.04
TPRKB-206ENST00000470012 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
TPRKB-206ENST00000470012 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
TPRKB-206ENST00000470012 LMTK3Q96Q04 1460 aa15.3■□□□□ 0.04
TPRKB-206ENST00000470012 RAD54L2Q9Y4B4 1467 aa15.29■□□□□ 0.04
TPRKB-206ENST00000470012 CUX1P39880 1505 aa15.28■□□□□ 0.04
TPRKB-206ENST00000470012 TDRD9Q8NDG6 1382 aaKnown RBP15.27■□□□□ 0.04
TPRKB-206ENST00000470012 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
TPRKB-206ENST00000470012 GRIN2BQ13224 1484 aa15.25■□□□□ 0.03
TPRKB-206ENST00000470012 SOCS7O14512 581 aa15.23■□□□□ 0.03
TPRKB-206ENST00000470012 CHMP7Q8WUX9 453 aaPredicted RBP15.23■□□□□ 0.03
TPRKB-206ENST00000470012 KIF13AQ9H1H9 1805 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms