RNA–Protein interactions for RNA: ENST00000469952.1

VSTM2A-206, Transcript of V-set and transmembrane domain containing 2A, humanhuman

TSL 5

Gene VSTM2A, Length 509 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-206ENST00000469952 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
VSTM2A-206ENST00000469952 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
VSTM2A-206ENST00000469952 CHIC1Q5VXU3 224 aa15.07■□□□□ 0
VSTM2A-206ENST00000469952 CCDC180Q9P1Z9 1646 aa14.43□□□□□ -0.1
VSTM2A-206ENST00000469952 ABCC9O60706 1549 aa14.12□□□□□ -0.15
VSTM2A-206ENST00000469952 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
VSTM2A-206ENST00000469952 ZCCHC6Q5VYS8 1495 aaKnown RBP13.72□□□□□ -0.21
VSTM2A-206ENST00000469952 NACADO15069 1562 aa13.66□□□□□ -0.22
VSTM2A-206ENST00000469952 MYO15BQ96JP2 1530 aa13.64□□□□□ -0.23
VSTM2A-206ENST00000469952 DCAF1Q9Y4B6 1507 aa13.63□□□□□ -0.23
VSTM2A-206ENST00000469952 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
VSTM2A-206ENST00000469952 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
VSTM2A-206ENST00000469952 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
VSTM2A-206ENST00000469952 SCRIBQ14160 1630 aa13.24□□□□□ -0.29
VSTM2A-206ENST00000469952 SHROOM4Q9ULL8 1493 aa13.21□□□□□ -0.3
VSTM2A-206ENST00000469952 PHF23Q9BUL5 403 aaPredicted RBP13.17□□□□□ -0.3
VSTM2A-206ENST00000469952 BICRAQ9NZM4 1560 aa13.14□□□□□ -0.31
VSTM2A-206ENST00000469952 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
VSTM2A-206ENST00000469952 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
VSTM2A-206ENST00000469952 CECR2Q9BXF3 1484 aa12.83□□□□□ -0.36
VSTM2A-206ENST00000469952 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
VSTM2A-206ENST00000469952 BAZ1AQ9NRL2 1556 aaPredicted RBP12.74□□□□□ -0.37
VSTM2A-206ENST00000469952 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
VSTM2A-206ENST00000469952 MROH2BQ7Z745 1585 aa12.69□□□□□ -0.38
VSTM2A-206ENST00000469952 SMARCA4P51532 1647 aa12.68□□□□□ -0.38
VSTM2A-206ENST00000469952 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
VSTM2A-206ENST00000469952 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
VSTM2A-206ENST00000469952 NCAPD3P42695 1498 aa12.65□□□□□ -0.38
VSTM2A-206ENST00000469952 SMARCA2P51531 1590 aa12.63□□□□□ -0.39
VSTM2A-206ENST00000469952 SUPT5HO00267 1087 aaKnown RBP12.6□□□□□ -0.39
VSTM2A-206ENST00000469952 BAZ1BQ9UIG0 1483 aaKnown RBP12.56□□□□□ -0.4
VSTM2A-206ENST00000469952 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
VSTM2A-206ENST00000469952 HMGXB3Q12766 1538 aa12.51□□□□□ -0.41
VSTM2A-206ENST00000469952 WIZO95785 1651 aa12.49□□□□□ -0.41
VSTM2A-206ENST00000469952 TOP2AP11388 1531 aaKnown RBP12.41□□□□□ -0.42
VSTM2A-206ENST00000469952 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
VSTM2A-206ENST00000469952 CADPSQ9ULU8 1353 aa12.34□□□□□ -0.43
VSTM2A-206ENST00000469952 FOXD1Q16676 465 aa12.31□□□□□ -0.44
VSTM2A-206ENST00000469952 PDS5BQ9NTI5 1447 aa12.25□□□□□ -0.45
VSTM2A-206ENST00000469952 CFTRP13569 1480 aa12.24□□□□□ -0.45
VSTM2A-206ENST00000469952 NESP48681 1621 aa12.24□□□□□ -0.45
VSTM2A-206ENST00000469952 PLPPR3Q6T4P5 718 aa12.22□□□□□ -0.45
VSTM2A-206ENST00000469952 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
VSTM2A-206ENST00000469952 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
VSTM2A-206ENST00000469952 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
VSTM2A-206ENST00000469952 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.47
VSTM2A-206ENST00000469952 MRC2Q9UBG0 1479 aa12.03□□□□□ -0.48
VSTM2A-206ENST00000469952 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
VSTM2A-206ENST00000469952 CUX2O14529 1486 aa11.96□□□□□ -0.49
VSTM2A-206ENST00000469952 KIF21AQ7Z4S6 1674 aa11.96□□□□□ -0.5
VSTM2A-206ENST00000469952 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.5
VSTM2A-206ENST00000469952 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
VSTM2A-206ENST00000469952 WDR62O43379 1518 aa11.93□□□□□ -0.5
VSTM2A-206ENST00000469952 TOPBP1Q92547 1522 aa11.93□□□□□ -0.5
VSTM2A-206ENST00000469952 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
VSTM2A-206ENST00000469952 THOC2Q8NI27 1593 aaKnown RBP11.91□□□□□ -0.5
VSTM2A-206ENST00000469952 PRDM2Q13029 1718 aa11.9□□□□□ -0.5
VSTM2A-206ENST00000469952 DNMBPQ6XZF7 1577 aa11.89□□□□□ -0.51
VSTM2A-206ENST00000469952 SOGA1O94964 1423 aa11.89□□□□□ -0.51
VSTM2A-206ENST00000469952 CUX1P39880 1505 aa11.88□□□□□ -0.51
VSTM2A-206ENST00000469952 IFT140Q96RY7 1462 aa11.85□□□□□ -0.51
VSTM2A-206ENST00000469952 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
VSTM2A-206ENST00000469952 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
VSTM2A-206ENST00000469952 RAD54L2Q9Y4B4 1467 aa11.82□□□□□ -0.52
VSTM2A-206ENST00000469952 TDRD9Q8NDG6 1382 aaKnown RBP11.8□□□□□ -0.52
VSTM2A-206ENST00000469952 TOP2BQ02880 1626 aa11.79□□□□□ -0.52
VSTM2A-206ENST00000469952 SYNJ1O43426 1573 aa11.79□□□□□ -0.52
VSTM2A-206ENST00000469952 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
VSTM2A-206ENST00000469952 ZNF608Q9ULD9 1512 aaPredicted RBP11.76□□□□□ -0.53
VSTM2A-206ENST00000469952 ABCA10Q8WWZ4 1543 aa11.74□□□□□ -0.53
VSTM2A-206ENST00000469952 BIVM-ERCC5R4GMW8 1640 aa11.74□□□□□ -0.53
VSTM2A-206ENST00000469952 KIF27Q86VH2 1401 aa11.72□□□□□ -0.53
VSTM2A-206ENST00000469952 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.53
VSTM2A-206ENST00000469952 GAPVD1Q14C86 1478 aa11.71□□□□□ -0.53
VSTM2A-206ENST00000469952 FBLN2P98095 1184 aa11.7□□□□□ -0.54
VSTM2A-206ENST00000469952 CHMP7Q8WUX9 453 aaPredicted RBP11.7□□□□□ -0.54
VSTM2A-206ENST00000469952 ADRA2BP18089 450 aa11.69□□□□□ -0.54
VSTM2A-206ENST00000469952 GRIN2BQ13224 1484 aa11.69□□□□□ -0.54
VSTM2A-206ENST00000469952 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
VSTM2A-206ENST00000469952 IGF1RP08069 1367 aa11.67□□□□□ -0.54
VSTM2A-206ENST00000469952 OSCARQ8IYS5 282 aa11.67□□□□□ -0.54
VSTM2A-206ENST00000469952 CSRNP3Q8WYN3 585 aa11.66□□□□□ -0.54
VSTM2A-206ENST00000469952 WDR97A6NE52 1622 aa11.64□□□□□ -0.55
VSTM2A-206ENST00000469952 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
VSTM2A-206ENST00000469952 PIAS4Q8N2W9 510 aaPredicted RBP11.63□□□□□ -0.55
VSTM2A-206ENST00000469952 CARMIL1Q5VZK9 1371 aa11.61□□□□□ -0.55
VSTM2A-206ENST00000469952 EIF4G3O43432 1585 aaKnown RBP11.61□□□□□ -0.55
VSTM2A-206ENST00000469952 SNAPC4Q5SXM2 1469 aa11.6□□□□□ -0.55
VSTM2A-206ENST00000469952 MAGI1Q96QZ7 1491 aaPredicted RBP11.6□□□□□ -0.55
VSTM2A-206ENST00000469952 RUSC2Q8N2Y8 1516 aa11.6□□□□□ -0.55
VSTM2A-206ENST00000469952 FHAD1B1AJZ9 1412 aa11.6□□□□□ -0.55
VSTM2A-206ENST00000469952 EEA1Q15075 1411 aa11.6□□□□□ -0.55
VSTM2A-206ENST00000469952 ERICH3Q5RHP9 1530 aa11.59□□□□□ -0.55
VSTM2A-206ENST00000469952 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
VSTM2A-206ENST00000469952 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
VSTM2A-206ENST00000469952 DNAJC5Q9H3Z4 198 aa11.53□□□□□ -0.56
VSTM2A-206ENST00000469952 MSH5O43196 834 aa11.51□□□□□ -0.57
VSTM2A-206ENST00000469952 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
VSTM2A-206ENST00000469952 GRIN2AQ12879 1464 aa11.5□□□□□ -0.57
VSTM2A-206ENST00000469952 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms