RNA–Protein interactions for RNA: ENST00000468646.6

LINC00877-203, long intergenic non-protein coding RNA 877, humanhuman

TSL 2 BASIC

Gene LINC00877, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00877-203ENST00000468646 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.57
LINC00877-203ENST00000468646 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
LINC00877-203ENST00000468646 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.95
LINC00877-203ENST00000468646 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
LINC00877-203ENST00000468646 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
LINC00877-203ENST00000468646 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
LINC00877-203ENST00000468646 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
LINC00877-203ENST00000468646 MYO15BQ96JP2 1530 aa20.05■□□□□ 0.8
LINC00877-203ENST00000468646 ABCC9O60706 1549 aa19.82■□□□□ 0.76
LINC00877-203ENST00000468646 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
LINC00877-203ENST00000468646 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
LINC00877-203ENST00000468646 NACADO15069 1562 aa19.71■□□□□ 0.75
LINC00877-203ENST00000468646 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
LINC00877-203ENST00000468646 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
LINC00877-203ENST00000468646 HRCP23327 699 aa19.28■□□□□ 0.68
LINC00877-203ENST00000468646 CECR2Q9BXF3 1484 aa19.24■□□□□ 0.67
LINC00877-203ENST00000468646 MROH2BQ7Z745 1585 aa19.22■□□□□ 0.67
LINC00877-203ENST00000468646 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
LINC00877-203ENST00000468646 WIZO95785 1651 aa19.11■□□□□ 0.65
LINC00877-203ENST00000468646 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.64
LINC00877-203ENST00000468646 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
LINC00877-203ENST00000468646 LOC105371045A0A1W2PR82 267 aa18.97■□□□□ 0.63
LINC00877-203ENST00000468646 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
LINC00877-203ENST00000468646 EIF4G1Q04637 1599 aaKnown RBP18.95■□□□□ 0.62
LINC00877-203ENST00000468646 TRIM41Q8WV44 630 aa18.93■□□□□ 0.62
LINC00877-203ENST00000468646 TOP2AP11388 1531 aaKnown RBP18.93■□□□□ 0.62
LINC00877-203ENST00000468646 TRIM26Q12899 539 aaPredicted RBP18.9■□□□□ 0.62
LINC00877-203ENST00000468646 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
LINC00877-203ENST00000468646 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
LINC00877-203ENST00000468646 CCDC88BA6NC98 1476 aa18.72■□□□□ 0.59
LINC00877-203ENST00000468646 PEG3Q9GZU2 1588 aa18.71■□□□□ 0.59
LINC00877-203ENST00000468646 ZEB1P37275 1124 aaPredicted RBP18.69■□□□□ 0.58
LINC00877-203ENST00000468646 FAM9AQ8IZU1 332 aaPredicted RBP18.6■□□□□ 0.57
LINC00877-203ENST00000468646 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
LINC00877-203ENST00000468646 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
LINC00877-203ENST00000468646 PABPN1Q86U42 306 aaKnown RBP eCLIP18.53■□□□□ 0.56
LINC00877-203ENST00000468646 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
LINC00877-203ENST00000468646 EEA1Q15075 1411 aa18.44■□□□□ 0.54
LINC00877-203ENST00000468646 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
LINC00877-203ENST00000468646 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.52
LINC00877-203ENST00000468646 SOGA1O94964 1423 aa18.32■□□□□ 0.52
LINC00877-203ENST00000468646 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
LINC00877-203ENST00000468646 TNIKQ9UKE5 1360 aa18.28■□□□□ 0.52
LINC00877-203ENST00000468646 SYNJ1O43426 1573 aa18.27■□□□□ 0.51
LINC00877-203ENST00000468646 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
LINC00877-203ENST00000468646 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
LINC00877-203ENST00000468646 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
LINC00877-203ENST00000468646 CSRNP3Q8WYN3 585 aa18.22■□□□□ 0.51
LINC00877-203ENST00000468646 GOLGA3Q08378 1498 aa18.21■□□□□ 0.51
LINC00877-203ENST00000468646 KIF21BO75037 1637 aa18.2■□□□□ 0.5
LINC00877-203ENST00000468646 NCAPD3P42695 1498 aa18.18■□□□□ 0.5
LINC00877-203ENST00000468646 TOP2BQ02880 1626 aa18.14■□□□□ 0.49
LINC00877-203ENST00000468646 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.49
LINC00877-203ENST00000468646 BIVM-ERCC5R4GMW8 1640 aa18.14■□□□□ 0.49
LINC00877-203ENST00000468646 UBTFP17480 764 aaKnown RBP18.01■□□□□ 0.47
LINC00877-203ENST00000468646 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
LINC00877-203ENST00000468646 CCER1Q8TC90 406 aaPredicted RBP17.98■□□□□ 0.47
LINC00877-203ENST00000468646 CFTRP13569 1480 aa17.97■□□□□ 0.47
LINC00877-203ENST00000468646 ERICH3Q5RHP9 1530 aa17.94■□□□□ 0.46
LINC00877-203ENST00000468646 CUX1P39880 1505 aa17.93■□□□□ 0.46
LINC00877-203ENST00000468646 RAPGEF2Q9Y4G8 1499 aa17.93■□□□□ 0.46
LINC00877-203ENST00000468646 CLIP1P30622 1438 aa17.92■□□□□ 0.46
LINC00877-203ENST00000468646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
LINC00877-203ENST00000468646 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
LINC00877-203ENST00000468646 VPS8Q8N3P4 1428 aa17.88■□□□□ 0.45
LINC00877-203ENST00000468646 KIF27Q86VH2 1401 aa17.8■□□□□ 0.44
LINC00877-203ENST00000468646 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
LINC00877-203ENST00000468646 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
LINC00877-203ENST00000468646 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
LINC00877-203ENST00000468646 TTBK1Q5TCY1 1321 aaPredicted RBP17.72■□□□□ 0.43
LINC00877-203ENST00000468646 ARAP1Q96P48 1450 aa17.71■□□□□ 0.43
LINC00877-203ENST00000468646 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
LINC00877-203ENST00000468646 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
LINC00877-203ENST00000468646 APLP2Q06481 763 aa17.66■□□□□ 0.42
LINC00877-203ENST00000468646 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
LINC00877-203ENST00000468646 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
LINC00877-203ENST00000468646 CUX2O14529 1486 aa17.61■□□□□ 0.41
LINC00877-203ENST00000468646 FGD5Q6ZNL6 1462 aa17.61■□□□□ 0.41
LINC00877-203ENST00000468646 ZNF316A6NFI3 1004 aaPredicted RBP17.6■□□□□ 0.41
LINC00877-203ENST00000468646 CLSPNQ9HAW4 1339 aa17.57■□□□□ 0.4
LINC00877-203ENST00000468646 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
LINC00877-203ENST00000468646 IGF1RP08069 1367 aa17.57■□□□□ 0.4
LINC00877-203ENST00000468646 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
LINC00877-203ENST00000468646 DNMBPQ6XZF7 1577 aa17.56■□□□□ 0.4
LINC00877-203ENST00000468646 RANGAP1P46060 587 aaPredicted RBP17.5■□□□□ 0.39
LINC00877-203ENST00000468646 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
LINC00877-203ENST00000468646 MAP3K1Q13233 1512 aa17.49■□□□□ 0.39
LINC00877-203ENST00000468646 ABCA10Q8WWZ4 1543 aa17.48■□□□□ 0.39
LINC00877-203ENST00000468646 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
LINC00877-203ENST00000468646 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
LINC00877-203ENST00000468646 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
LINC00877-203ENST00000468646 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
LINC00877-203ENST00000468646 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
LINC00877-203ENST00000468646 CUL7Q14999 1698 aa17.43■□□□□ 0.38
LINC00877-203ENST00000468646 POLA1P09884 1462 aaPredicted RBP17.43■□□□□ 0.38
LINC00877-203ENST00000468646 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
LINC00877-203ENST00000468646 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
LINC00877-203ENST00000468646 TIAM1Q13009 1591 aa17.41■□□□□ 0.38
LINC00877-203ENST00000468646 NESP48681 1621 aa17.39■□□□□ 0.37
LINC00877-203ENST00000468646 CFAP43Q8NDM7 1665 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms