RNA–Protein interactions for RNA: ENST00000467410.1

URGCP-209, Transcript of upregulator of cell proliferation, humanhuman

TSL 4

Gene URGCP, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URGCP-209ENST00000467410 AEBP2Q6ZN18 517 aaPredicted RBP18.29■□□□□ 0.52
URGCP-209ENST00000467410 CHIC1Q5VXU3 224 aa17.32■□□□□ 0.36
URGCP-209ENST00000467410 NISCHQ9Y2I1 1504 aa15.88■□□□□ 0.13
URGCP-209ENST00000467410 SENP3Q9H4L4 574 aaPredicted RBP15.65■□□□□ 0.1
URGCP-209ENST00000467410 PHF23Q9BUL5 403 aaPredicted RBP15.4■□□□□ 0.06
URGCP-209ENST00000467410 ABCC9O60706 1549 aa15.11■□□□□ 0.01
URGCP-209ENST00000467410 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
URGCP-209ENST00000467410 FOXD1Q16676 465 aa14.57□□□□□ -0.08
URGCP-209ENST00000467410 CCDC180Q9P1Z9 1646 aa14.53□□□□□ -0.08
URGCP-209ENST00000467410 RB1CC1Q8TDY2 1594 aa14.1□□□□□ -0.15
URGCP-209ENST00000467410 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
URGCP-209ENST00000467410 UNC13AQ9UPW8 1703 aa13.87□□□□□ -0.19
URGCP-209ENST00000467410 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
URGCP-209ENST00000467410 NACADO15069 1562 aa13.84□□□□□ -0.19
URGCP-209ENST00000467410 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
URGCP-209ENST00000467410 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
URGCP-209ENST00000467410 MSH5O43196 834 aa13.71□□□□□ -0.21
URGCP-209ENST00000467410 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
URGCP-209ENST00000467410 CECR2Q9BXF3 1484 aa13.65□□□□□ -0.22
URGCP-209ENST00000467410 CC2D2AQ9P2K1 1620 aa13.62□□□□□ -0.23
URGCP-209ENST00000467410 PIAS4Q8N2W9 510 aaPredicted RBP13.56□□□□□ -0.24
URGCP-209ENST00000467410 PPP6R1Q9UPN7 881 aa13.54□□□□□ -0.24
URGCP-209ENST00000467410 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
URGCP-209ENST00000467410 ADRA2BP18089 450 aa13.46□□□□□ -0.25
URGCP-209ENST00000467410 EIF4G1Q04637 1599 aaKnown RBP13.43□□□□□ -0.26
URGCP-209ENST00000467410 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
URGCP-209ENST00000467410 MYO15BQ96JP2 1530 aa13.4□□□□□ -0.26
URGCP-209ENST00000467410 SCRIBQ14160 1630 aa13.24□□□□□ -0.29
URGCP-209ENST00000467410 CUX2O14529 1486 aa13.22□□□□□ -0.29
URGCP-209ENST00000467410 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
URGCP-209ENST00000467410 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
URGCP-209ENST00000467410 ZCCHC6Q5VYS8 1495 aaKnown RBP13.04□□□□□ -0.32
URGCP-209ENST00000467410 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
URGCP-209ENST00000467410 NESP48681 1621 aa12.81□□□□□ -0.36
URGCP-209ENST00000467410 THOC2Q8NI27 1593 aaKnown RBP12.81□□□□□ -0.36
URGCP-209ENST00000467410 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
URGCP-209ENST00000467410 SMARCA2P51531 1590 aa12.72□□□□□ -0.37
URGCP-209ENST00000467410 KIF21AQ7Z4S6 1674 aa12.68□□□□□ -0.38
URGCP-209ENST00000467410 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
URGCP-209ENST00000467410 HMGXB3Q12766 1538 aa12.64□□□□□ -0.39
URGCP-209ENST00000467410 BAZ1AQ9NRL2 1556 aaPredicted RBP12.6□□□□□ -0.39
URGCP-209ENST00000467410 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
URGCP-209ENST00000467410 SMARCA4P51532 1647 aa12.54□□□□□ -0.4
URGCP-209ENST00000467410 PDS5BQ9NTI5 1447 aa12.53□□□□□ -0.4
URGCP-209ENST00000467410 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
URGCP-209ENST00000467410 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
URGCP-209ENST00000467410 MRC2Q9UBG0 1479 aa12.48□□□□□ -0.41
URGCP-209ENST00000467410 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
URGCP-209ENST00000467410 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
URGCP-209ENST00000467410 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
URGCP-209ENST00000467410 WDR62O43379 1518 aa12.47□□□□□ -0.41
URGCP-209ENST00000467410 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
URGCP-209ENST00000467410 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
URGCP-209ENST00000467410 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
URGCP-209ENST00000467410 PEG3Q9GZU2 1588 aa12.38□□□□□ -0.43
URGCP-209ENST00000467410 CADPSQ9ULU8 1353 aa12.35□□□□□ -0.43
URGCP-209ENST00000467410 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
URGCP-209ENST00000467410 ARHGEF11O15085 1522 aa12.35□□□□□ -0.43
URGCP-209ENST00000467410 CEP164Q9UPV0 1460 aa12.32□□□□□ -0.44
URGCP-209ENST00000467410 CYB5RLQ6IPT4 315 aa12.28□□□□□ -0.44
URGCP-209ENST00000467410 MROH2BQ7Z745 1585 aa12.25□□□□□ -0.45
URGCP-209ENST00000467410 FANCD2Q9BXW9 1451 aa12.24□□□□□ -0.45
URGCP-209ENST00000467410 URB2Q14146 1524 aaKnown RBP12.19□□□□□ -0.46
URGCP-209ENST00000467410 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
URGCP-209ENST00000467410 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
URGCP-209ENST00000467410 CHD1O14646 1710 aa12.14□□□□□ -0.47
URGCP-209ENST00000467410 WIZO95785 1651 aa12.12□□□□□ -0.47
URGCP-209ENST00000467410 CFTRP13569 1480 aa12.08□□□□□ -0.47
URGCP-209ENST00000467410 IFT140Q96RY7 1462 aa12.08□□□□□ -0.48
URGCP-209ENST00000467410 EIF4G3O43432 1585 aaKnown RBP12.07□□□□□ -0.48
URGCP-209ENST00000467410 PPP4R3CPQ6ZMV5 832 aa12.05□□□□□ -0.48
URGCP-209ENST00000467410 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
URGCP-209ENST00000467410 PRDM2Q13029 1718 aa12.04□□□□□ -0.48
URGCP-209ENST00000467410 FBLN2P98095 1184 aa12.01□□□□□ -0.49
URGCP-209ENST00000467410 ILDR1Q86SU0 546 aaPredicted RBP11.97□□□□□ -0.49
URGCP-209ENST00000467410 TOPBP1Q92547 1522 aa11.96□□□□□ -0.5
URGCP-209ENST00000467410 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
URGCP-209ENST00000467410 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■■■□□ 18.2
URGCP-209ENST00000467410 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
URGCP-209ENST00000467410 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
URGCP-209ENST00000467410 TOP2AP11388 1531 aaKnown RBP11.88□□□□□ -0.51
URGCP-209ENST00000467410 CNKSR2Q8WXI2 1034 aa11.88□□□□□ -0.51
URGCP-209ENST00000467410 DNMBPQ6XZF7 1577 aa11.87□□□□□ -0.51
URGCP-209ENST00000467410 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
URGCP-209ENST00000467410 ABCC8Q09428 1581 aa11.85□□□□□ -0.51
URGCP-209ENST00000467410 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
URGCP-209ENST00000467410 SNAPC4Q5SXM2 1469 aa11.82□□□□□ -0.52
URGCP-209ENST00000467410 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
URGCP-209ENST00000467410 KIF13AQ9H1H9 1805 aa11.79□□□□□ -0.52
URGCP-209ENST00000467410 POLA1P09884 1462 aaPredicted RBP11.79□□□□□ -0.52
URGCP-209ENST00000467410 CHMP7Q8WUX9 453 aaPredicted RBP11.79□□□□□ -0.52
URGCP-209ENST00000467410 TDRD9Q8NDG6 1382 aaKnown RBP11.79□□□□□ -0.52
URGCP-209ENST00000467410 RAD54L2Q9Y4B4 1467 aa11.77□□□□□ -0.52
URGCP-209ENST00000467410 DCAF8L1A6NGE4 600 aa11.75□□□□□ -0.53
URGCP-209ENST00000467410 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
URGCP-209ENST00000467410 CCDC88BA6NC98 1476 aa11.74□□□□□ -0.53
URGCP-209ENST00000467410 MAGI1Q96QZ7 1491 aaPredicted RBP11.74□□□□□ -0.53
URGCP-209ENST00000467410 ERCC6L2Q5T890 1561 aa11.71□□□□□ -0.53
URGCP-209ENST00000467410 SYNJ2O15056 1496 aa11.71□□□□□ -0.53
URGCP-209ENST00000467410 SOGA1O94964 1423 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms