RNA–Protein interactions for RNA: ENST00000466884.1

COL2A1-204, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 478 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-204ENST00000466884 AEBP2Q6ZN18 517 aaPredicted RBP24.85■■□□□ 1.57
COL2A1-204ENST00000466884 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
COL2A1-204ENST00000466884 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
COL2A1-204ENST00000466884 NISCHQ9Y2I1 1504 aa20.89■□□□□ 0.94
COL2A1-204ENST00000466884 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
COL2A1-204ENST00000466884 FOXD1Q16676 465 aa19.81■□□□□ 0.76
COL2A1-204ENST00000466884 ABCC9O60706 1549 aa19.41■□□□□ 0.7
COL2A1-204ENST00000466884 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.62
COL2A1-204ENST00000466884 POTEDQ86YR6 584 aa18.7■□□□□ 0.58
COL2A1-204ENST00000466884 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
COL2A1-204ENST00000466884 MSH5O43196 834 aa18.62■□□□□ 0.57
COL2A1-204ENST00000466884 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
COL2A1-204ENST00000466884 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
COL2A1-204ENST00000466884 PPP6R1Q9UPN7 881 aa18.31■□□□□ 0.52
COL2A1-204ENST00000466884 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
COL2A1-204ENST00000466884 ADRA2BP18089 450 aa18.21■□□□□ 0.51
COL2A1-204ENST00000466884 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
COL2A1-204ENST00000466884 NACADO15069 1562 aa18.01■□□□□ 0.47
COL2A1-204ENST00000466884 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
COL2A1-204ENST00000466884 UNC13AQ9UPW8 1703 aa17.81■□□□□ 0.44
COL2A1-204ENST00000466884 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
COL2A1-204ENST00000466884 MYO15BQ96JP2 1530 aa17.58■□□□□ 0.41
COL2A1-204ENST00000466884 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.4
COL2A1-204ENST00000466884 CC2D2AQ9P2K1 1620 aa17.48■□□□□ 0.39
COL2A1-204ENST00000466884 DNAJC5Q9H3Z4 198 aa17.46■□□□□ 0.39
COL2A1-204ENST00000466884 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
COL2A1-204ENST00000466884 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
COL2A1-204ENST00000466884 SCRIBQ14160 1630 aa17.22■□□□□ 0.35
COL2A1-204ENST00000466884 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.34
COL2A1-204ENST00000466884 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
COL2A1-204ENST00000466884 CUX2O14529 1486 aa16.89■□□□□ 0.29
COL2A1-204ENST00000466884 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
COL2A1-204ENST00000466884 ERCC6Q03468 1493 aa16.81■□□□□ 0.28
COL2A1-204ENST00000466884 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
COL2A1-204ENST00000466884 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
COL2A1-204ENST00000466884 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
COL2A1-204ENST00000466884 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
COL2A1-204ENST00000466884 NESP48681 1621 aa16.53■□□□□ 0.24
COL2A1-204ENST00000466884 ATAD2BQ9ULI0 1458 aa16.53■□□□□ 0.24
COL2A1-204ENST00000466884 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
COL2A1-204ENST00000466884 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
COL2A1-204ENST00000466884 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
COL2A1-204ENST00000466884 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
COL2A1-204ENST00000466884 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
COL2A1-204ENST00000466884 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
COL2A1-204ENST00000466884 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
COL2A1-204ENST00000466884 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
COL2A1-204ENST00000466884 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
COL2A1-204ENST00000466884 PEG3Q9GZU2 1588 aa16.2■□□□□ 0.18
COL2A1-204ENST00000466884 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
COL2A1-204ENST00000466884 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
COL2A1-204ENST00000466884 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
COL2A1-204ENST00000466884 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
COL2A1-204ENST00000466884 PPP4R3CPQ6ZMV5 832 aa16.13■□□□□ 0.17
COL2A1-204ENST00000466884 WDR62O43379 1518 aa16.09■□□□□ 0.17
COL2A1-204ENST00000466884 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
COL2A1-204ENST00000466884 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
COL2A1-204ENST00000466884 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
COL2A1-204ENST00000466884 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
COL2A1-204ENST00000466884 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
COL2A1-204ENST00000466884 RNF39Q9H2S5 420 aa15.9■□□□□ 0.14
COL2A1-204ENST00000466884 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
COL2A1-204ENST00000466884 RIMBP3CA6NJZ7 1639 aa15.88■□□□□ 0.13
COL2A1-204ENST00000466884 RIMBP3BA6NNM3 1639 aa15.88■□□□□ 0.13
COL2A1-204ENST00000466884 RIMBP3Q9UFD9 1639 aa15.88■□□□□ 0.13
COL2A1-204ENST00000466884 WIZO95785 1651 aa15.88■□□□□ 0.13
COL2A1-204ENST00000466884 CFTRP13569 1480 aa15.84■□□□□ 0.13
COL2A1-204ENST00000466884 RNF216Q9NWF9 866 aaPredicted RBP15.83■□□□□ 0.12
COL2A1-204ENST00000466884 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
COL2A1-204ENST00000466884 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
COL2A1-204ENST00000466884 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
COL2A1-204ENST00000466884 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
COL2A1-204ENST00000466884 ZNF608Q9ULD9 1512 aaPredicted RBP15.71■□□□□ 0.11
COL2A1-204ENST00000466884 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
COL2A1-204ENST00000466884 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
COL2A1-204ENST00000466884 FBLN2P98095 1184 aa15.62■□□□□ 0.09
COL2A1-204ENST00000466884 C1QBPQ07021 282 aaKnown RBP15.62■□□□□ 0.09
COL2A1-204ENST00000466884 RSF1Q96T23 1441 aaPredicted RBP15.61■□□□□ 0.09
COL2A1-204ENST00000466884 PRDM2Q13029 1718 aa15.6■□□□□ 0.09
COL2A1-204ENST00000466884 ARAP1Q96P48 1450 aa15.59■□□□□ 0.09
COL2A1-204ENST00000466884 TOPBP1Q92547 1522 aa15.58■□□□□ 0.08
COL2A1-204ENST00000466884 EIF4G3O43432 1585 aaKnown RBP15.57■□□□□ 0.08
COL2A1-204ENST00000466884 CHD1O14646 1710 aa15.55■□□□□ 0.08
COL2A1-204ENST00000466884 ABCC8Q09428 1581 aa15.55■□□□□ 0.08
COL2A1-204ENST00000466884 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL2A1-204ENST00000466884 CCDC88BA6NC98 1476 aa15.5■□□□□ 0.07
COL2A1-204ENST00000466884 DNMBPQ6XZF7 1577 aa15.47■□□□□ 0.07
COL2A1-204ENST00000466884 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.06
COL2A1-204ENST00000466884 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
COL2A1-204ENST00000466884 TDRD9Q8NDG6 1382 aaKnown RBP15.39■□□□□ 0.05
COL2A1-204ENST00000466884 POLA1P09884 1462 aaPredicted RBP15.39■□□□□ 0.05
COL2A1-204ENST00000466884 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
COL2A1-204ENST00000466884 SOGA1O94964 1423 aa15.37■□□□□ 0.05
COL2A1-204ENST00000466884 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
COL2A1-204ENST00000466884 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
COL2A1-204ENST00000466884 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.05
COL2A1-204ENST00000466884 SYNJ1O43426 1573 aa15.33■□□□□ 0.05
COL2A1-204ENST00000466884 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.04
COL2A1-204ENST00000466884 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.04
COL2A1-204ENST00000466884 WDR97A6NE52 1622 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms