RNA–Protein interactions for RNA: ENST00000466359.1

NFX1-205, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 3

Gene NFX1, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-205ENST00000466359 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
NFX1-205ENST00000466359 CCDC180Q9P1Z9 1646 aa12.39□□□□□ -0.43
NFX1-205ENST00000466359 ABCC9O60706 1549 aa11.96□□□□□ -0.49
NFX1-205ENST00000466359 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
NFX1-205ENST00000466359 ZCCHC6Q5VYS8 1495 aaKnown RBP11.77□□□□□ -0.52
NFX1-205ENST00000466359 DCAF1Q9Y4B6 1507 aa11.77□□□□□ -0.52
NFX1-205ENST00000466359 NACADO15069 1562 aa11.71□□□□□ -0.53
NFX1-205ENST00000466359 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
NFX1-205ENST00000466359 RB1CC1Q8TDY2 1594 aa11.63□□□□□ -0.55
NFX1-205ENST00000466359 SHROOM4Q9ULL8 1493 aa11.32□□□□□ -0.6
NFX1-205ENST00000466359 BICRAQ9NZM4 1560 aa11.25□□□□□ -0.61
NFX1-205ENST00000466359 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
NFX1-205ENST00000466359 SCRIBQ14160 1630 aa11.22□□□□□ -0.61
NFX1-205ENST00000466359 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.62
NFX1-205ENST00000466359 EIF4G1Q04637 1599 aaKnown RBP10.95□□□□□ -0.66
NFX1-205ENST00000466359 DNAJC5BQ9UF47 199 aa10.95□□□□□ -0.66
NFX1-205ENST00000466359 CECR2Q9BXF3 1484 aa10.92□□□□□ -0.66
NFX1-205ENST00000466359 BAZ1AQ9NRL2 1556 aaPredicted RBP10.91□□□□□ -0.66
NFX1-205ENST00000466359 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
NFX1-205ENST00000466359 ATAD2BQ9ULI0 1458 aa10.84□□□□□ -0.67
NFX1-205ENST00000466359 PEG3Q9GZU2 1588 aa10.83□□□□□ -0.68
NFX1-205ENST00000466359 SMARCA4P51532 1647 aa10.83□□□□□ -0.68
NFX1-205ENST00000466359 CC2D2AQ9P2K1 1620 aa10.83□□□□□ -0.68
NFX1-205ENST00000466359 RSF1Q96T23 1441 aaPredicted RBP10.83□□□□□ -0.68
NFX1-205ENST00000466359 MROH2BQ7Z745 1585 aa10.82□□□□□ -0.68
NFX1-205ENST00000466359 SMARCA2P51531 1590 aa10.81□□□□□ -0.68
NFX1-205ENST00000466359 HMGXB3Q12766 1538 aa10.75□□□□□ -0.69
NFX1-205ENST00000466359 BAZ1BQ9UIG0 1483 aaKnown RBP10.7□□□□□ -0.7
NFX1-205ENST00000466359 TOP2AP11388 1531 aaKnown RBP10.61□□□□□ -0.71
NFX1-205ENST00000466359 WIZO95785 1651 aa10.6□□□□□ -0.71
NFX1-205ENST00000466359 DNAJC5Q9H3Z4 198 aa10.56□□□□□ -0.72
NFX1-205ENST00000466359 CADPSQ9ULU8 1353 aa10.55□□□□□ -0.72
NFX1-205ENST00000466359 SUPT5HO00267 1087 aaKnown RBP10.54□□□□□ -0.72
NFX1-205ENST00000466359 CCDC88BA6NC98 1476 aa10.51□□□□□ -0.73
NFX1-205ENST00000466359 CFTRP13569 1480 aa10.5□□□□□ -0.73
NFX1-205ENST00000466359 PDS5BQ9NTI5 1447 aa10.46□□□□□ -0.74
NFX1-205ENST00000466359 LAMC3Q9Y6N6 1575 aa10.46□□□□□ -0.74
NFX1-205ENST00000466359 NESP48681 1621 aa10.39□□□□□ -0.75
NFX1-205ENST00000466359 FANCD2Q9BXW9 1451 aa10.35□□□□□ -0.75
NFX1-205ENST00000466359 ERCC6Q03468 1493 aa10.33□□□□□ -0.76
NFX1-205ENST00000466359 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
NFX1-205ENST00000466359 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
NFX1-205ENST00000466359 MRC2Q9UBG0 1479 aa10.28□□□□□ -0.76
NFX1-205ENST00000466359 CUX2O14529 1486 aa10.27□□□□□ -0.77
NFX1-205ENST00000466359 WDR62O43379 1518 aa10.23□□□□□ -0.77
NFX1-205ENST00000466359 URB2Q14146 1524 aaKnown RBP10.21□□□□□ -0.78
NFX1-205ENST00000466359 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
NFX1-205ENST00000466359 TOPBP1Q92547 1522 aa10.18□□□□□ -0.78
NFX1-205ENST00000466359 WRNQ14191 1432 aaPredicted RBP eCLIP10.18□□□□□ -0.78
NFX1-205ENST00000466359 PRDM2Q13029 1718 aa10.16□□□□□ -0.78
NFX1-205ENST00000466359 DNMBPQ6XZF7 1577 aa10.16□□□□□ -0.78
NFX1-205ENST00000466359 KIF21AQ7Z4S6 1674 aa10.15□□□□□ -0.78
NFX1-205ENST00000466359 IFT140Q96RY7 1462 aa10.14□□□□□ -0.79
NFX1-205ENST00000466359 CUX1P39880 1505 aa10.13□□□□□ -0.79
NFX1-205ENST00000466359 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
NFX1-205ENST00000466359 SOGA1O94964 1423 aa10.11□□□□□ -0.79
NFX1-205ENST00000466359 TOP2BQ02880 1626 aa10.09□□□□□ -0.79
NFX1-205ENST00000466359 FGD5Q6ZNL6 1462 aa10.08□□□□□ -0.8
NFX1-205ENST00000466359 ABCA10Q8WWZ4 1543 aa10.06□□□□□ -0.8
NFX1-205ENST00000466359 WDR97A6NE52 1622 aa10.04□□□□□ -0.8
NFX1-205ENST00000466359 BIVM-ERCC5R4GMW8 1640 aa10.04□□□□□ -0.8
NFX1-205ENST00000466359 TRIM41Q8WV44 630 aa10.04□□□□□ -0.8
NFX1-205ENST00000466359 SYNJ1O43426 1573 aa10.03□□□□□ -0.8
NFX1-205ENST00000466359 TARBP1Q13395 1621 aaKnown RBP10.03□□□□□ -0.8
NFX1-205ENST00000466359 RAD54L2Q9Y4B4 1467 aa10.03□□□□□ -0.8
NFX1-205ENST00000466359 CHIC1Q5VXU3 224 aa10.02□□□□□ -0.81
NFX1-205ENST00000466359 TDRD9Q8NDG6 1382 aaKnown RBP10.01□□□□□ -0.81
NFX1-205ENST00000466359 ZNF608Q9ULD9 1512 aaPredicted RBP10□□□□□ -0.81
NFX1-205ENST00000466359 AQRO60306 1485 aaKnown RBP eCLIP9.98□□□□□ -0.81
NFX1-205ENST00000466359 KIF27Q86VH2 1401 aa9.98□□□□□ -0.81
NFX1-205ENST00000466359 GRIN2BQ13224 1484 aa9.98□□□□□ -0.81
NFX1-205ENST00000466359 GAPVD1Q14C86 1478 aa9.98□□□□□ -0.81
NFX1-205ENST00000466359 IGF1RP08069 1367 aa9.97□□□□□ -0.81
NFX1-205ENST00000466359 MAGI1Q96QZ7 1491 aaPredicted RBP9.94□□□□□ -0.82
NFX1-205ENST00000466359 ERICH3Q5RHP9 1530 aa9.93□□□□□ -0.82
NFX1-205ENST00000466359 EEA1Q15075 1411 aa9.93□□□□□ -0.82
NFX1-205ENST00000466359 OSCARQ8IYS5 282 aa9.91□□□□□ -0.82
NFX1-205ENST00000466359 ABCA5Q8WWZ7 1642 aa9.91□□□□□ -0.82
NFX1-205ENST00000466359 FHAD1B1AJZ9 1412 aa9.9□□□□□ -0.82
NFX1-205ENST00000466359 EIF4G3O43432 1585 aaKnown RBP9.89□□□□□ -0.83
NFX1-205ENST00000466359 CHMP7Q8WUX9 453 aaPredicted RBP9.89□□□□□ -0.83
NFX1-205ENST00000466359 SYNJ2O15056 1496 aa9.89□□□□□ -0.83
NFX1-205ENST00000466359 CSRNP3Q8WYN3 585 aa9.88□□□□□ -0.83
NFX1-205ENST00000466359 CARMIL1Q5VZK9 1371 aa9.88□□□□□ -0.83
NFX1-205ENST00000466359 SNAPC4Q5SXM2 1469 aa9.86□□□□□ -0.83
NFX1-205ENST00000466359 PRXQ9BXM0 1461 aa9.85□□□□□ -0.83
NFX1-205ENST00000466359 NUP160Q12769 1436 aa9.82□□□□□ -0.84
NFX1-205ENST00000466359 RUSC2Q8N2Y8 1516 aa9.82□□□□□ -0.84
NFX1-205ENST00000466359 GRIN2AQ12879 1464 aa9.81□□□□□ -0.84
NFX1-205ENST00000466359 FBLN2P98095 1184 aa9.81□□□□□ -0.84
NFX1-205ENST00000466359 RAPGEF2Q9Y4G8 1499 aa9.8□□□□□ -0.84
NFX1-205ENST00000466359 ADAMTS12P58397 1594 aa9.8□□□□□ -0.84
NFX1-205ENST00000466359 CUL7Q14999 1698 aa9.78□□□□□ -0.84
NFX1-205ENST00000466359 KIAA0586Q9BVV6 1533 aa9.77□□□□□ -0.84
NFX1-205ENST00000466359 PBRM1Q86U86 1689 aa9.75□□□□□ -0.85
NFX1-205ENST00000466359 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
NFX1-205ENST00000466359 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
NFX1-205ENST00000466359 FAM9AQ8IZU1 332 aaPredicted RBP9.69□□□□□ -0.86
NFX1-205ENST00000466359 KIF21BO75037 1637 aa9.68□□□□□ -0.86
NFX1-205ENST00000466359 CEP170Q5SW79 1584 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms