RNA–Protein interactions for RNA: ENST00000465014.6

CBWD1-211, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-211ENST00000465014 AEBP2Q6ZN18 517 aaPredicted RBP22.25■■□□□ 1.15
CBWD1-211ENST00000465014 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
CBWD1-211ENST00000465014 SENP3Q9H4L4 574 aaPredicted RBP19.19■□□□□ 0.66
CBWD1-211ENST00000465014 NISCHQ9Y2I1 1504 aa18.89■□□□□ 0.61
CBWD1-211ENST00000465014 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
CBWD1-211ENST00000465014 POTEDQ86YR6 584 aa18.3■□□□□ 0.52
CBWD1-211ENST00000465014 FOXD1Q16676 465 aa17.96■□□□□ 0.46
CBWD1-211ENST00000465014 MSH5O43196 834 aa17.2■□□□□ 0.34
CBWD1-211ENST00000465014 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
CBWD1-211ENST00000465014 ABCC9O60706 1549 aa16.74■□□□□ 0.27
CBWD1-211ENST00000465014 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
CBWD1-211ENST00000465014 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
CBWD1-211ENST00000465014 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
CBWD1-211ENST00000465014 ADRA2BP18089 450 aa15.98■□□□□ 0.15
CBWD1-211ENST00000465014 NACADO15069 1562 aa15.91■□□□□ 0.14
CBWD1-211ENST00000465014 DCAF8L2P0C7V8 631 aa15.89■□□□□ 0.13
CBWD1-211ENST00000465014 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.12
CBWD1-211ENST00000465014 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
CBWD1-211ENST00000465014 MYO15BQ96JP2 1530 aa15.71■□□□□ 0.11
CBWD1-211ENST00000465014 ZCCHC6Q5VYS8 1495 aaKnown RBP15.68■□□□□ 0.1
CBWD1-211ENST00000465014 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
CBWD1-211ENST00000465014 DCAF1Q9Y4B6 1507 aa15.59■□□□□ 0.09
CBWD1-211ENST00000465014 BICRAQ9NZM4 1560 aa15.54■□□□□ 0.08
CBWD1-211ENST00000465014 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
CBWD1-211ENST00000465014 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
CBWD1-211ENST00000465014 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
CBWD1-211ENST00000465014 SHROOM4Q9ULL8 1493 aa15.28■□□□□ 0.04
CBWD1-211ENST00000465014 CC2D2AQ9P2K1 1620 aa15.14■□□□□ 0.01
CBWD1-211ENST00000465014 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
CBWD1-211ENST00000465014 DNAJC5Q9H3Z4 198 aa15.1■□□□□ 0.01
CBWD1-211ENST00000465014 DMRT2Q9Y5R5 561 aa15.06■□□□□ 0
CBWD1-211ENST00000465014 CECR2Q9BXF3 1484 aa15.04■□□□□ -0
CBWD1-211ENST00000465014 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
CBWD1-211ENST00000465014 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
CBWD1-211ENST00000465014 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
CBWD1-211ENST00000465014 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
CBWD1-211ENST00000465014 ATAD2BQ9ULI0 1458 aa14.67□□□□□ -0.06
CBWD1-211ENST00000465014 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
CBWD1-211ENST00000465014 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
CBWD1-211ENST00000465014 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
CBWD1-211ENST00000465014 MROH2BQ7Z745 1585 aa14.57□□□□□ -0.08
CBWD1-211ENST00000465014 RNF39Q9H2S5 420 aa14.56□□□□□ -0.08
CBWD1-211ENST00000465014 PEG3Q9GZU2 1588 aa14.55□□□□□ -0.08
CBWD1-211ENST00000465014 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
CBWD1-211ENST00000465014 DCAF8L1A6NGE4 600 aa14.5□□□□□ -0.09
CBWD1-211ENST00000465014 WIZO95785 1651 aa14.45□□□□□ -0.1
CBWD1-211ENST00000465014 NESP48681 1621 aa14.44□□□□□ -0.1
CBWD1-211ENST00000465014 ERCC6Q03468 1493 aa14.43□□□□□ -0.1
CBWD1-211ENST00000465014 LAMC3Q9Y6N6 1575 aa14.35□□□□□ -0.11
CBWD1-211ENST00000465014 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
CBWD1-211ENST00000465014 CUX2O14529 1486 aa14.32□□□□□ -0.12
CBWD1-211ENST00000465014 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
CBWD1-211ENST00000465014 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
CBWD1-211ENST00000465014 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
CBWD1-211ENST00000465014 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
CBWD1-211ENST00000465014 TOP2AP11388 1531 aaKnown RBP14.23□□□□□ -0.13
CBWD1-211ENST00000465014 PDS5BQ9NTI5 1447 aa14.23□□□□□ -0.13
CBWD1-211ENST00000465014 POTEHQ6S545 545 aa14.17□□□□□ -0.14
CBWD1-211ENST00000465014 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
CBWD1-211ENST00000465014 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
CBWD1-211ENST00000465014 CFTRP13569 1480 aa14.11□□□□□ -0.15
CBWD1-211ENST00000465014 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
CBWD1-211ENST00000465014 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
CBWD1-211ENST00000465014 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
CBWD1-211ENST00000465014 WDR62O43379 1518 aa14.08□□□□□ -0.16
CBWD1-211ENST00000465014 CCDC88BA6NC98 1476 aa14.07□□□□□ -0.16
CBWD1-211ENST00000465014 URB2Q14146 1524 aaKnown RBP13.98□□□□□ -0.17
CBWD1-211ENST00000465014 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
CBWD1-211ENST00000465014 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
CBWD1-211ENST00000465014 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.2
CBWD1-211ENST00000465014 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
CBWD1-211ENST00000465014 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
CBWD1-211ENST00000465014 ABCC8Q09428 1581 aa13.8□□□□□ -0.2
CBWD1-211ENST00000465014 IFT140Q96RY7 1462 aa13.79□□□□□ -0.2
CBWD1-211ENST00000465014 ZNF608Q9ULD9 1512 aaPredicted RBP13.78□□□□□ -0.2
CBWD1-211ENST00000465014 TARBP1Q13395 1621 aaKnown RBP13.74□□□□□ -0.21
CBWD1-211ENST00000465014 PPP4R3CPQ6ZMV5 832 aa13.74□□□□□ -0.21
CBWD1-211ENST00000465014 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
CBWD1-211ENST00000465014 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
CBWD1-211ENST00000465014 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.22
CBWD1-211ENST00000465014 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
CBWD1-211ENST00000465014 CUX1P39880 1505 aa13.69□□□□□ -0.22
CBWD1-211ENST00000465014 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
CBWD1-211ENST00000465014 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
CBWD1-211ENST00000465014 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
CBWD1-211ENST00000465014 CHD1O14646 1710 aa13.65□□□□□ -0.22
CBWD1-211ENST00000465014 SOGA1O94964 1423 aa13.65□□□□□ -0.22
CBWD1-211ENST00000465014 TDRD9Q8NDG6 1382 aaKnown RBP13.61□□□□□ -0.23
CBWD1-211ENST00000465014 WDR97A6NE52 1622 aa13.6□□□□□ -0.23
CBWD1-211ENST00000465014 RIMBP3CA6NJZ7 1639 aa13.56□□□□□ -0.24
CBWD1-211ENST00000465014 RIMBP3BA6NNM3 1639 aa13.56□□□□□ -0.24
CBWD1-211ENST00000465014 RIMBP3Q9UFD9 1639 aa13.56□□□□□ -0.24
CBWD1-211ENST00000465014 FBLN2P98095 1184 aa13.55□□□□□ -0.24
CBWD1-211ENST00000465014 PBRM1Q86U86 1689 aa13.55□□□□□ -0.24
CBWD1-211ENST00000465014 SNAPC4Q5SXM2 1469 aa13.53□□□□□ -0.24
CBWD1-211ENST00000465014 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
CBWD1-211ENST00000465014 TOP2BQ02880 1626 aa13.52□□□□□ -0.25
CBWD1-211ENST00000465014 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
CBWD1-211ENST00000465014 GRIN2BQ13224 1484 aa13.51□□□□□ -0.25
CBWD1-211ENST00000465014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms