RNA–Protein interactions for RNA: ENST00000463807.1

SAMSN1-204, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 3

Gene SAMSN1, Length 933 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-204ENST00000463807 AEBP2Q6ZN18 517 aaPredicted RBP29.32■■■□□ 2.28
SAMSN1-204ENST00000463807 CHIC1Q5VXU3 224 aa28.07■■■□□ 2.08
SAMSN1-204ENST00000463807 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
SAMSN1-204ENST00000463807 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
SAMSN1-204ENST00000463807 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
SAMSN1-204ENST00000463807 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
SAMSN1-204ENST00000463807 FOXD1Q16676 465 aa23.31■■□□□ 1.32
SAMSN1-204ENST00000463807 ABCC9O60706 1549 aa22.84■■□□□ 1.25
SAMSN1-204ENST00000463807 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
SAMSN1-204ENST00000463807 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
SAMSN1-204ENST00000463807 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
SAMSN1-204ENST00000463807 NACADO15069 1562 aa22.26■■□□□ 1.15
SAMSN1-204ENST00000463807 DCAF8L2P0C7V8 631 aa22.25■■□□□ 1.15
SAMSN1-204ENST00000463807 MYO15BQ96JP2 1530 aa22.24■■□□□ 1.15
SAMSN1-204ENST00000463807 RB1CC1Q8TDY2 1594 aa22.22■■□□□ 1.15
SAMSN1-204ENST00000463807 PIAS4Q8N2W9 510 aaPredicted RBP21.9■■□□□ 1.1
SAMSN1-204ENST00000463807 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
SAMSN1-204ENST00000463807 ADRA2BP18089 450 aa21.89■■□□□ 1.09
SAMSN1-204ENST00000463807 MSH5O43196 834 aa21.83■■□□□ 1.09
SAMSN1-204ENST00000463807 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
SAMSN1-204ENST00000463807 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
SAMSN1-204ENST00000463807 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
SAMSN1-204ENST00000463807 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
SAMSN1-204ENST00000463807 PABPN1Q86U42 306 aaKnown RBP eCLIP21.35■■□□□ 1.01
SAMSN1-204ENST00000463807 POTEDQ86YR6 584 aa20.94■□□□□ 0.94
SAMSN1-204ENST00000463807 EIF4G1Q04637 1599 aaKnown RBP20.89■□□□□ 0.93
SAMSN1-204ENST00000463807 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
SAMSN1-204ENST00000463807 CECR2Q9BXF3 1484 aa20.79■□□□□ 0.92
SAMSN1-204ENST00000463807 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
SAMSN1-204ENST00000463807 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
SAMSN1-204ENST00000463807 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
SAMSN1-204ENST00000463807 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
SAMSN1-204ENST00000463807 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
SAMSN1-204ENST00000463807 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
SAMSN1-204ENST00000463807 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
SAMSN1-204ENST00000463807 DNAJC5BQ9UF47 199 aa20.49■□□□□ 0.87
SAMSN1-204ENST00000463807 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
SAMSN1-204ENST00000463807 HMGXB3Q12766 1538 aa20.48■□□□□ 0.87
SAMSN1-204ENST00000463807 WIZO95785 1651 aa20.47■□□□□ 0.87
SAMSN1-204ENST00000463807 BAZ1BQ9UIG0 1483 aaKnown RBP20.45■□□□□ 0.86
SAMSN1-204ENST00000463807 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
SAMSN1-204ENST00000463807 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
SAMSN1-204ENST00000463807 SCAF1Q9H7N4 1312 aaKnown RBP20.14■□□□□ 0.81
SAMSN1-204ENST00000463807 MAPK8IP2Q13387 824 aaPredicted RBP20.05■□□□□ 0.8
SAMSN1-204ENST00000463807 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
SAMSN1-204ENST00000463807 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
SAMSN1-204ENST00000463807 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
SAMSN1-204ENST00000463807 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
SAMSN1-204ENST00000463807 CFTRP13569 1480 aa19.86■□□□□ 0.77
SAMSN1-204ENST00000463807 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
SAMSN1-204ENST00000463807 NESP48681 1621 aa19.84■□□□□ 0.77
SAMSN1-204ENST00000463807 PPP4R3CPQ6ZMV5 832 aa19.8■□□□□ 0.76
SAMSN1-204ENST00000463807 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
SAMSN1-204ENST00000463807 ERCC6Q03468 1493 aa19.75■□□□□ 0.75
SAMSN1-204ENST00000463807 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
SAMSN1-204ENST00000463807 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
SAMSN1-204ENST00000463807 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
SAMSN1-204ENST00000463807 MRC2Q9UBG0 1479 aa19.56■□□□□ 0.72
SAMSN1-204ENST00000463807 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
SAMSN1-204ENST00000463807 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
SAMSN1-204ENST00000463807 WDR62O43379 1518 aa19.47■□□□□ 0.71
SAMSN1-204ENST00000463807 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
SAMSN1-204ENST00000463807 URB2Q14146 1524 aaKnown RBP19.44■□□□□ 0.7
SAMSN1-204ENST00000463807 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
SAMSN1-204ENST00000463807 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
SAMSN1-204ENST00000463807 CUX2O14529 1486 aa19.4■□□□□ 0.7
SAMSN1-204ENST00000463807 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
SAMSN1-204ENST00000463807 CUX1P39880 1505 aa19.37■□□□□ 0.69
SAMSN1-204ENST00000463807 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
SAMSN1-204ENST00000463807 BIVM-ERCC5R4GMW8 1640 aa19.35■□□□□ 0.69
SAMSN1-204ENST00000463807 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
SAMSN1-204ENST00000463807 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
SAMSN1-204ENST00000463807 POLA1P09884 1462 aaPredicted RBP19.26■□□□□ 0.67
SAMSN1-204ENST00000463807 IFT140Q96RY7 1462 aa19.24■□□□□ 0.67
SAMSN1-204ENST00000463807 DCAF8L1A6NGE4 600 aa19.21■□□□□ 0.67
SAMSN1-204ENST00000463807 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
SAMSN1-204ENST00000463807 SOGA1O94964 1423 aa19.19■□□□□ 0.66
SAMSN1-204ENST00000463807 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
SAMSN1-204ENST00000463807 TARBP1Q13395 1621 aaKnown RBP19.16■□□□□ 0.66
SAMSN1-204ENST00000463807 NCBP3Q53F19 620 aaKnown RBP19.16■□□□□ 0.66
SAMSN1-204ENST00000463807 RNF216Q9NWF9 866 aaPredicted RBP19.15■□□□□ 0.66
SAMSN1-204ENST00000463807 WDR97A6NE52 1622 aa19.14■□□□□ 0.66
SAMSN1-204ENST00000463807 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
SAMSN1-204ENST00000463807 ABCA10Q8WWZ4 1543 aa19.11■□□□□ 0.65
SAMSN1-204ENST00000463807 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
SAMSN1-204ENST00000463807 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
SAMSN1-204ENST00000463807 ABCA5Q8WWZ7 1642 aa19.03■□□□□ 0.64
SAMSN1-204ENST00000463807 KIF27Q86VH2 1401 aa19.01■□□□□ 0.63
SAMSN1-204ENST00000463807 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
SAMSN1-204ENST00000463807 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
SAMSN1-204ENST00000463807 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
SAMSN1-204ENST00000463807 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.632e-16■■□□□ 11.6
SAMSN1-204ENST00000463807 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
SAMSN1-204ENST00000463807 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
SAMSN1-204ENST00000463807 EEA1Q15075 1411 aa18.92■□□□□ 0.62
SAMSN1-204ENST00000463807 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
SAMSN1-204ENST00000463807 CUL7Q14999 1698 aa18.87■□□□□ 0.61
SAMSN1-204ENST00000463807 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
SAMSN1-204ENST00000463807 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
SAMSN1-204ENST00000463807 RUSC2Q8N2Y8 1516 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms