RNA–Protein interactions for RNA: ENST00000463728.1

LRP11-203, Transcript of LDL receptor related protein 11, humanhuman

TSL 2

Gene LRP11, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP11-203ENST00000463728 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
LRP11-203ENST00000463728 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
LRP11-203ENST00000463728 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
LRP11-203ENST00000463728 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
LRP11-203ENST00000463728 ABCC9O60706 1549 aa17.79■□□□□ 0.44
LRP11-203ENST00000463728 ZCCHC6Q5VYS8 1495 aaKnown RBP17.62■□□□□ 0.41
LRP11-203ENST00000463728 DCAF8L2P0C7V8 631 aa17.47■□□□□ 0.39
LRP11-203ENST00000463728 DCAF1Q9Y4B6 1507 aa17.36■□□□□ 0.37
LRP11-203ENST00000463728 NACADO15069 1562 aa17.28■□□□□ 0.36
LRP11-203ENST00000463728 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
LRP11-203ENST00000463728 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
LRP11-203ENST00000463728 SCRIBQ14160 1630 aa17.02■□□□□ 0.31
LRP11-203ENST00000463728 SHROOM4Q9ULL8 1493 aa17■□□□□ 0.31
LRP11-203ENST00000463728 UNC13AQ9UPW8 1703 aa16.92■□□□□ 0.3
LRP11-203ENST00000463728 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
LRP11-203ENST00000463728 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
LRP11-203ENST00000463728 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
LRP11-203ENST00000463728 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
LRP11-203ENST00000463728 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
LRP11-203ENST00000463728 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
LRP11-203ENST00000463728 SMARCA4P51532 1647 aa16.27■□□□□ 0.19
LRP11-203ENST00000463728 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
LRP11-203ENST00000463728 EIF4G1Q04637 1599 aaKnown RBP16.24■□□□□ 0.19
LRP11-203ENST00000463728 RSF1Q96T23 1441 aaPredicted RBP16.2■□□□□ 0.18
LRP11-203ENST00000463728 SUPT5HO00267 1087 aaKnown RBP16.17■□□□□ 0.18
LRP11-203ENST00000463728 WIZO95785 1651 aa16.14■□□□□ 0.17
LRP11-203ENST00000463728 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.17
LRP11-203ENST00000463728 ATAD2BQ9ULI0 1458 aa16.04■□□□□ 0.16
LRP11-203ENST00000463728 PEG3Q9GZU2 1588 aa16.03■□□□□ 0.16
LRP11-203ENST00000463728 SMARCA2P51531 1590 aa16.02■□□□□ 0.16
LRP11-203ENST00000463728 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
LRP11-203ENST00000463728 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
LRP11-203ENST00000463728 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
LRP11-203ENST00000463728 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
LRP11-203ENST00000463728 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
LRP11-203ENST00000463728 CCDC88BA6NC98 1476 aa15.76■□□□□ 0.11
LRP11-203ENST00000463728 FOXD1Q16676 465 aa15.63■□□□□ 0.09
LRP11-203ENST00000463728 NESP48681 1621 aa15.53■□□□□ 0.08
LRP11-203ENST00000463728 CFTRP13569 1480 aa15.5■□□□□ 0.07
LRP11-203ENST00000463728 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
LRP11-203ENST00000463728 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
LRP11-203ENST00000463728 PRDM2Q13029 1718 aa15.47■□□□□ 0.07
LRP11-203ENST00000463728 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.07
LRP11-203ENST00000463728 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
LRP11-203ENST00000463728 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
LRP11-203ENST00000463728 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
LRP11-203ENST00000463728 PDS5BQ9NTI5 1447 aa15.32■□□□□ 0.04
LRP11-203ENST00000463728 CEP164Q9UPV0 1460 aa15.31■□□□□ 0.04
LRP11-203ENST00000463728 ERCC6Q03468 1493 aa15.27■□□□□ 0.03
LRP11-203ENST00000463728 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
LRP11-203ENST00000463728 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
LRP11-203ENST00000463728 CUX1P39880 1505 aa15.24■□□□□ 0.03
LRP11-203ENST00000463728 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
LRP11-203ENST00000463728 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
LRP11-203ENST00000463728 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
LRP11-203ENST00000463728 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
LRP11-203ENST00000463728 DNMBPQ6XZF7 1577 aa15.19■□□□□ 0.02
LRP11-203ENST00000463728 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
LRP11-203ENST00000463728 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
LRP11-203ENST00000463728 THOC2Q8NI27 1593 aaKnown RBP15.17■□□□□ 0.02
LRP11-203ENST00000463728 WDR62O43379 1518 aa15.12■□□□□ 0.01
LRP11-203ENST00000463728 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
LRP11-203ENST00000463728 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
LRP11-203ENST00000463728 RAD54L2Q9Y4B4 1467 aa15.03■□□□□ -0
LRP11-203ENST00000463728 CUX2O14529 1486 aa15.01□□□□□ -0.01
LRP11-203ENST00000463728 SOGA1O94964 1423 aa15□□□□□ -0.01
LRP11-203ENST00000463728 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
LRP11-203ENST00000463728 TARBP1Q13395 1621 aaKnown RBP14.98□□□□□ -0.01
LRP11-203ENST00000463728 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
LRP11-203ENST00000463728 FAM9AQ8IZU1 332 aaPredicted RBP14.96□□□□□ -0.01
LRP11-203ENST00000463728 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
LRP11-203ENST00000463728 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
LRP11-203ENST00000463728 ADRA2BP18089 450 aa14.93□□□□□ -0.02
LRP11-203ENST00000463728 ZNF608Q9ULD9 1512 aaPredicted RBP14.9□□□□□ -0.02
LRP11-203ENST00000463728 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
LRP11-203ENST00000463728 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
LRP11-203ENST00000463728 KIF27Q86VH2 1401 aa14.89□□□□□ -0.03
LRP11-203ENST00000463728 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
LRP11-203ENST00000463728 EIF4G3O43432 1585 aaKnown RBP14.86□□□□□ -0.03
LRP11-203ENST00000463728 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.03
LRP11-203ENST00000463728 EEA1Q15075 1411 aa14.84□□□□□ -0.03
LRP11-203ENST00000463728 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
LRP11-203ENST00000463728 GAPVD1Q14C86 1478 aa14.83□□□□□ -0.03
LRP11-203ENST00000463728 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
LRP11-203ENST00000463728 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
LRP11-203ENST00000463728 PIAS4Q8N2W9 510 aaPredicted RBP14.78□□□□□ -0.04
LRP11-203ENST00000463728 IGF1RP08069 1367 aa14.77□□□□□ -0.04
LRP11-203ENST00000463728 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
LRP11-203ENST00000463728 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
LRP11-203ENST00000463728 SNAPC4Q5SXM2 1469 aa14.74□□□□□ -0.05
LRP11-203ENST00000463728 CUL7Q14999 1698 aa14.73□□□□□ -0.05
LRP11-203ENST00000463728 KIF21BO75037 1637 aa14.73□□□□□ -0.05
LRP11-203ENST00000463728 LOC105371045A0A1W2PR82 267 aa14.72□□□□□ -0.05
LRP11-203ENST00000463728 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
LRP11-203ENST00000463728 PRXQ9BXM0 1461 aa14.71□□□□□ -0.05
LRP11-203ENST00000463728 CARMIL1Q5VZK9 1371 aa14.71□□□□□ -0.06
LRP11-203ENST00000463728 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
LRP11-203ENST00000463728 GOLGA3Q08378 1498 aa14.67□□□□□ -0.06
LRP11-203ENST00000463728 MAGI1Q96QZ7 1491 aaPredicted RBP14.67□□□□□ -0.06
LRP11-203ENST00000463728 FHAD1B1AJZ9 1412 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms