RNA–Protein interactions for RNA: ENST00000463275.1

HCG9-202, Transcript of HLA complex group 9, humanhuman

TSL 5

Gene HCG9, Length 101 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG9-202ENST00000463275 DNAJC5BQ9UF47 199 aa7.95□□□□□ -1.14
HCG9-202ENST00000463275 NISCHQ9Y2I1 1504 aa7.94□□□□□ -1.14
HCG9-202ENST00000463275 ABCC9O60706 1549 aa7.85□□□□□ -1.15
HCG9-202ENST00000463275 DNAJC5Q9H3Z4 198 aa7.61□□□□□ -1.19
HCG9-202ENST00000463275 PABPN1Q86U42 306 aaKnown RBP eCLIP7.28□□□□□ -1.24
HCG9-202ENST00000463275 CCDC180Q9P1Z9 1646 aa7.27□□□□□ -1.25
HCG9-202ENST00000463275 RB1CC1Q8TDY2 1594 aa7.19□□□□□ -1.26
HCG9-202ENST00000463275 CECR2Q9BXF3 1484 aa7.12□□□□□ -1.27
HCG9-202ENST00000463275 BICRAQ9NZM4 1560 aa7.08□□□□□ -1.28
HCG9-202ENST00000463275 CC2D2AQ9P2K1 1620 aa7.05□□□□□ -1.28
HCG9-202ENST00000463275 UNC13AQ9UPW8 1703 aa7.04□□□□□ -1.28
HCG9-202ENST00000463275 NACADO15069 1562 aa7.03□□□□□ -1.28
HCG9-202ENST00000463275 TRIM41Q8WV44 630 aa7.01□□□□□ -1.29
HCG9-202ENST00000463275 CUX2O14529 1486 aa6.94□□□□□ -1.3
HCG9-202ENST00000463275 DCAF8L2P0C7V8 631 aa6.92□□□□□ -1.3
HCG9-202ENST00000463275 EIF4G1Q04637 1599 aaKnown RBP6.91□□□□□ -1.3
HCG9-202ENST00000463275 SHROOM4Q9ULL8 1493 aa6.85□□□□□ -1.31
HCG9-202ENST00000463275 MYO15BQ96JP2 1530 aa6.79□□□□□ -1.32
HCG9-202ENST00000463275 ERCC6Q03468 1493 aa6.75□□□□□ -1.33
HCG9-202ENST00000463275 AEBP2Q6ZN18 517 aaPredicted RBP6.67□□□□□ -1.34
HCG9-202ENST00000463275 SCRIBQ14160 1630 aa6.65□□□□□ -1.34
HCG9-202ENST00000463275 NESP48681 1621 aa6.62□□□□□ -1.35
HCG9-202ENST00000463275 THOC2Q8NI27 1593 aaKnown RBP6.61□□□□□ -1.35
HCG9-202ENST00000463275 ILDR1Q86SU0 546 aaPredicted RBP6.59□□□□□ -1.35
HCG9-202ENST00000463275 OSCARQ8IYS5 282 aa6.58□□□□□ -1.36
HCG9-202ENST00000463275 NCAPD3P42695 1498 aa6.55□□□□□ -1.36
HCG9-202ENST00000463275 RIMBP3CA6NJZ7 1639 aa6.52□□□□□ -1.37
HCG9-202ENST00000463275 RIMBP3BA6NNM3 1639 aa6.52□□□□□ -1.37
HCG9-202ENST00000463275 RIMBP3Q9UFD9 1639 aa6.52□□□□□ -1.37
HCG9-202ENST00000463275 TRHP20396 242 aaPredicted RBP6.52□□□□□ -1.37
HCG9-202ENST00000463275 DCAF1Q9Y4B6 1507 aa6.51□□□□□ -1.37
HCG9-202ENST00000463275 BAZ1AQ9NRL2 1556 aaPredicted RBP6.5□□□□□ -1.37
HCG9-202ENST00000463275 SMARCA2P51531 1590 aa6.49□□□□□ -1.37
HCG9-202ENST00000463275 CYB5RLQ6IPT4 315 aa6.47□□□□□ -1.37
HCG9-202ENST00000463275 ZCCHC6Q5VYS8 1495 aaKnown RBP6.47□□□□□ -1.37
HCG9-202ENST00000463275 ATAD2BQ9ULI0 1458 aa6.46□□□□□ -1.38
HCG9-202ENST00000463275 ARHGEF11O15085 1522 aa6.45□□□□□ -1.38
HCG9-202ENST00000463275 KIF21AQ7Z4S6 1674 aa6.45□□□□□ -1.38
HCG9-202ENST00000463275 LAMC3Q9Y6N6 1575 aa6.42□□□□□ -1.38
HCG9-202ENST00000463275 PDS5BQ9NTI5 1447 aa6.42□□□□□ -1.38
HCG9-202ENST00000463275 MRC2Q9UBG0 1479 aa6.4□□□□□ -1.39
HCG9-202ENST00000463275 WDR62O43379 1518 aa6.4□□□□□ -1.39
HCG9-202ENST00000463275 HMGXB3Q12766 1538 aa6.4□□□□□ -1.39
HCG9-202ENST00000463275 ARAP1Q96P48 1450 aa6.38□□□□□ -1.39
HCG9-202ENST00000463275 CADPSQ9ULU8 1353 aa6.32□□□□□ -1.4
HCG9-202ENST00000463275 BAZ1BQ9UIG0 1483 aaKnown RBP6.31□□□□□ -1.4
HCG9-202ENST00000463275 KDM4FA0A1W2PPD8 638 aa6.28□□□□□ -1.4
HCG9-202ENST00000463275 SMARCA4P51532 1647 aa6.28□□□□□ -1.4
HCG9-202ENST00000463275 ZNF608Q9ULD9 1512 aaPredicted RBP6.26□□□□□ -1.41
HCG9-202ENST00000463275 CEP164Q9UPV0 1460 aa6.25□□□□□ -1.41
HCG9-202ENST00000463275 URB2Q14146 1524 aaKnown RBP6.25□□□□□ -1.41
HCG9-202ENST00000463275 RSF1Q96T23 1441 aaPredicted RBP6.25□□□□□ -1.41
HCG9-202ENST00000463275 PEG3Q9GZU2 1588 aa6.23□□□□□ -1.41
HCG9-202ENST00000463275 FANCD2Q9BXW9 1451 aa6.22□□□□□ -1.41
HCG9-202ENST00000463275 FBXO41Q8TF61 875 aa6.19□□□□□ -1.42
HCG9-202ENST00000463275 SOCS7O14512 581 aa6.17□□□□□ -1.42
HCG9-202ENST00000463275 ILDR2Q71H61 639 aa6.17□□□□□ -1.42
HCG9-202ENST00000463275 IFT140Q96RY7 1462 aa6.16□□□□□ -1.42
HCG9-202ENST00000463275 CHD1O14646 1710 aa6.16□□□□□ -1.42
HCG9-202ENST00000463275 FBLN2P98095 1184 aa6.15□□□□□ -1.42
HCG9-202ENST00000463275 LMTK3Q96Q04 1460 aa6.15□□□□□ -1.43
HCG9-202ENST00000463275 AQRO60306 1485 aaKnown RBP eCLIP6.14□□□□□ -1.43
HCG9-202ENST00000463275 CFTRP13569 1480 aa6.14□□□□□ -1.43
HCG9-202ENST00000463275 MROH2BQ7Z745 1585 aa6.14□□□□□ -1.43
HCG9-202ENST00000463275 CLASP1Q7Z460 1538 aa6.13□□□□□ -1.43
HCG9-202ENST00000463275 EIF4G3O43432 1585 aaKnown RBP6.12□□□□□ -1.43
HCG9-202ENST00000463275 ERCC6L2Q5T890 1561 aa6.11□□□□□ -1.43
HCG9-202ENST00000463275 GAPVD1Q14C86 1478 aa6.1□□□□□ -1.43
HCG9-202ENST00000463275 HECW2Q9P2P5 1572 aa6.1□□□□□ -1.43
HCG9-202ENST00000463275 KIF13AQ9H1H9 1805 aa6.08□□□□□ -1.44
HCG9-202ENST00000463275 TOPBP1Q92547 1522 aa6.06□□□□□ -1.44
HCG9-202ENST00000463275 SYNJ2O15056 1496 aa6.05□□□□□ -1.44
HCG9-202ENST00000463275 TARBP1Q13395 1621 aaKnown RBP6.05□□□□□ -1.44
HCG9-202ENST00000463275 FAM69CQ0P6D2 419 aa6.03□□□□□ -1.44
HCG9-202ENST00000463275 CHMP7Q8WUX9 453 aaPredicted RBP6.03□□□□□ -1.44
HCG9-202ENST00000463275 ADGRL1O94910 1474 aa6.02□□□□□ -1.44
HCG9-202ENST00000463275 TDRD9Q8NDG6 1382 aaKnown RBP6.02□□□□□ -1.45
HCG9-202ENST00000463275 SYNJ1O43426 1573 aa6.01□□□□□ -1.45
HCG9-202ENST00000463275 DISP3Q9P2K9 1392 aa6.01□□□□□ -1.45
HCG9-202ENST00000463275 SNAPC4Q5SXM2 1469 aa6.01□□□□□ -1.45
HCG9-202ENST00000463275 ABCC10Q5T3U5 1492 aa6□□□□□ -1.45
HCG9-202ENST00000463275 WIZO95785 1651 aa6□□□□□ -1.45
HCG9-202ENST00000463275 KDM6BO15054 1643 aa5.99□□□□□ -1.45
HCG9-202ENST00000463275 RAD54L2Q9Y4B4 1467 aa5.98□□□□□ -1.45
HCG9-202ENST00000463275 POLA1P09884 1462 aaPredicted RBP5.97□□□□□ -1.45
HCG9-202ENST00000463275 ABCC8Q09428 1581 aa5.97□□□□□ -1.45
HCG9-202ENST00000463275 DNMBPQ6XZF7 1577 aa5.96□□□□□ -1.46
HCG9-202ENST00000463275 MAGI1Q96QZ7 1491 aaPredicted RBP5.96□□□□□ -1.46
HCG9-202ENST00000463275 DIP2BQ9P265 1576 aa5.94□□□□□ -1.46
HCG9-202ENST00000463275 SOGA1O94964 1423 aa5.93□□□□□ -1.46
HCG9-202ENST00000463275 CEP170Q5SW79 1584 aa5.93□□□□□ -1.46
HCG9-202ENST00000463275 GRIN2BQ13224 1484 aa5.92□□□□□ -1.46
HCG9-202ENST00000463275 COL17A1Q9UMD9 1497 aaPredicted RBP5.92□□□□□ -1.46
HCG9-202ENST00000463275 PRDM2Q13029 1718 aa5.91□□□□□ -1.46
HCG9-202ENST00000463275 MAPKBP1O60336 1514 aa5.91□□□□□ -1.46
HCG9-202ENST00000463275 TSPOAP1O95153 1857 aa5.9□□□□□ -1.47
HCG9-202ENST00000463275 CERKQ8TCT0 537 aa5.89□□□□□ -1.47
HCG9-202ENST00000463275 NUP160Q12769 1436 aa5.88□□□□□ -1.47
HCG9-202ENST00000463275 WDR97A6NE52 1622 aa5.88□□□□□ -1.47
HCG9-202ENST00000463275 TOP2AP11388 1531 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms