RNA–Protein interactions for RNA: ENST00000462233.5

PCNX2-206, Transcript of pecanex 2, humanhuman

TSL 2

Gene PCNX2, Length 3,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-206ENST00000462233 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
PCNX2-206ENST00000462233 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
PCNX2-206ENST00000462233 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
PCNX2-206ENST00000462233 ZCCHC6Q5VYS8 1495 aaKnown RBP20.13■□□□□ 0.81
PCNX2-206ENST00000462233 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
PCNX2-206ENST00000462233 NACADO15069 1562 aa19.47■□□□□ 0.71
PCNX2-206ENST00000462233 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
PCNX2-206ENST00000462233 HRCP23327 699 aa18.96■□□□□ 0.63
PCNX2-206ENST00000462233 ABCC9O60706 1549 aa18.91■□□□□ 0.62
PCNX2-206ENST00000462233 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
PCNX2-206ENST00000462233 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.61
PCNX2-206ENST00000462233 PPARGC1BQ86YN6 1023 aaKnown RBP18.79■□□□□ 0.6
PCNX2-206ENST00000462233 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
PCNX2-206ENST00000462233 PCGF6Q9BYE7 350 aa18.63■□□□□ 0.57
PCNX2-206ENST00000462233 PELP1Q8IZL8 1130 aaKnown RBP18.61■□□□□ 0.57
PCNX2-206ENST00000462233 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.55
PCNX2-206ENST00000462233 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
PCNX2-206ENST00000462233 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
PCNX2-206ENST00000462233 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
PCNX2-206ENST00000462233 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
PCNX2-206ENST00000462233 RSF1Q96T23 1441 aaPredicted RBP18.31■□□□□ 0.52
PCNX2-206ENST00000462233 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
PCNX2-206ENST00000462233 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
PCNX2-206ENST00000462233 MROH2BQ7Z745 1585 aa18.16■□□□□ 0.5
PCNX2-206ENST00000462233 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
PCNX2-206ENST00000462233 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
PCNX2-206ENST00000462233 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
PCNX2-206ENST00000462233 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
PCNX2-206ENST00000462233 WIZO95785 1651 aa18.04■□□□□ 0.48
PCNX2-206ENST00000462233 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
PCNX2-206ENST00000462233 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
PCNX2-206ENST00000462233 MYT1Q01538 1121 aa17.9■□□□□ 0.46
PCNX2-206ENST00000462233 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
PCNX2-206ENST00000462233 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
PCNX2-206ENST00000462233 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
PCNX2-206ENST00000462233 LOC105371045A0A1W2PR82 267 aa17.8■□□□□ 0.44
PCNX2-206ENST00000462233 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
PCNX2-206ENST00000462233 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
PCNX2-206ENST00000462233 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
PCNX2-206ENST00000462233 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
PCNX2-206ENST00000462233 NEUROD1Q13562 356 aa17.61■□□□□ 0.41
PCNX2-206ENST00000462233 ACIN1Q9UKV3 1341 aaKnown RBP17.59■□□□□ 0.41
PCNX2-206ENST00000462233 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.4
PCNX2-206ENST00000462233 BIVM-ERCC5R4GMW8 1640 aa17.49■□□□□ 0.39
PCNX2-206ENST00000462233 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.38
PCNX2-206ENST00000462233 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
PCNX2-206ENST00000462233 CFTRP13569 1480 aa17.4■□□□□ 0.38
PCNX2-206ENST00000462233 EEA1Q15075 1411 aa17.37■□□□□ 0.37
PCNX2-206ENST00000462233 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
PCNX2-206ENST00000462233 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
PCNX2-206ENST00000462233 LAMC3Q9Y6N6 1575 aa17.29■□□□□ 0.36
PCNX2-206ENST00000462233 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
PCNX2-206ENST00000462233 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
PCNX2-206ENST00000462233 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
PCNX2-206ENST00000462233 KIF21BO75037 1637 aa17.18■□□□□ 0.34
PCNX2-206ENST00000462233 YTHDC1Q96MU7 727 aaKnown RBP17.18■□□□□ 0.34
PCNX2-206ENST00000462233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
PCNX2-206ENST00000462233 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
PCNX2-206ENST00000462233 CCER1Q8TC90 406 aaPredicted RBP17.12■□□□□ 0.33
PCNX2-206ENST00000462233 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
PCNX2-206ENST00000462233 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
PCNX2-206ENST00000462233 FAM9AQ8IZU1 332 aaPredicted RBP17.12■□□□□ 0.33
PCNX2-206ENST00000462233 WDR97A6NE52 1622 aa17.11■□□□□ 0.33
PCNX2-206ENST00000462233 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
PCNX2-206ENST00000462233 DNMBPQ6XZF7 1577 aa17.05■□□□□ 0.32
PCNX2-206ENST00000462233 CUX1P39880 1505 aa17.05■□□□□ 0.32
PCNX2-206ENST00000462233 TRIM41Q8WV44 630 aa16.98■□□□□ 0.31
PCNX2-206ENST00000462233 BCL11AQ9H165 835 aa16.97■□□□□ 0.31
PCNX2-206ENST00000462233 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
PCNX2-206ENST00000462233 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
PCNX2-206ENST00000462233 CUL7Q14999 1698 aa16.87■□□□□ 0.29
PCNX2-206ENST00000462233 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
PCNX2-206ENST00000462233 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
PCNX2-206ENST00000462233 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
PCNX2-206ENST00000462233 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
PCNX2-206ENST00000462233 TNIKQ9UKE5 1360 aa16.85■□□□□ 0.29
PCNX2-206ENST00000462233 PDS5BQ9NTI5 1447 aa16.84■□□□□ 0.29
PCNX2-206ENST00000462233 KIF21AQ7Z4S6 1674 aa16.84■□□□□ 0.29
PCNX2-206ENST00000462233 ABCA5Q8WWZ7 1642 aa16.83■□□□□ 0.28
PCNX2-206ENST00000462233 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
PCNX2-206ENST00000462233 WDR62O43379 1518 aa16.8■□□□□ 0.28
PCNX2-206ENST00000462233 TARBP1Q13395 1621 aaKnown RBP16.77■□□□□ 0.28
PCNX2-206ENST00000462233 SOGA1O94964 1423 aa16.77■□□□□ 0.28
PCNX2-206ENST00000462233 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
PCNX2-206ENST00000462233 MIER1Q8N108 512 aa16.75■□□□□ 0.27
PCNX2-206ENST00000462233 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
PCNX2-206ENST00000462233 ANP32EQ9BTT0 268 aa16.73■□□□□ 0.27
PCNX2-206ENST00000462233 ZNF316A6NFI3 1004 aaPredicted RBP16.73■□□□□ 0.27
PCNX2-206ENST00000462233 URB2Q14146 1524 aaKnown RBP16.72■□□□□ 0.27
PCNX2-206ENST00000462233 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
PCNX2-206ENST00000462233 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
PCNX2-206ENST00000462233 MRC2Q9UBG0 1479 aa16.69■□□□□ 0.26
PCNX2-206ENST00000462233 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
PCNX2-206ENST00000462233 RUSC2Q8N2Y8 1516 aa16.66■□□□□ 0.26
PCNX2-206ENST00000462233 CTTNBP2Q8WZ74 1663 aa16.66■□□□□ 0.26
PCNX2-206ENST00000462233 PBRM1Q86U86 1689 aa16.64■□□□□ 0.25
PCNX2-206ENST00000462233 NESP48681 1621 aa16.62■□□□□ 0.25
PCNX2-206ENST00000462233 MAP3K1Q13233 1512 aa16.6■□□□□ 0.25
PCNX2-206ENST00000462233 TSHZ2Q9NRE2 1034 aa16.58■□□□□ 0.24
PCNX2-206ENST00000462233 EFCAB5A4FU69 1503 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms