RNA–Protein interactions for RNA: ENST00000461879.5

TSC1-204, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-204ENST00000461879 NISCHQ9Y2I1 1504 aa14.25□□□□□ -0.13
TSC1-204ENST00000461879 CHIC1Q5VXU3 224 aa13.55□□□□□ -0.24
TSC1-204ENST00000461879 AEBP2Q6ZN18 517 aaPredicted RBP13.49□□□□□ -0.25
TSC1-204ENST00000461879 CCDC180Q9P1Z9 1646 aa12.5□□□□□ -0.41
TSC1-204ENST00000461879 PHF23Q9BUL5 403 aaPredicted RBP12□□□□□ -0.49
TSC1-204ENST00000461879 ZCCHC6Q5VYS8 1495 aaKnown RBP11.94□□□□□ -0.5
TSC1-204ENST00000461879 ABCC9O60706 1549 aa11.92□□□□□ -0.5
TSC1-204ENST00000461879 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
TSC1-204ENST00000461879 DCAF1Q9Y4B6 1507 aa11.83□□□□□ -0.52
TSC1-204ENST00000461879 MYO15BQ96JP2 1530 aa11.77□□□□□ -0.52
TSC1-204ENST00000461879 NACADO15069 1562 aa11.72□□□□□ -0.53
TSC1-204ENST00000461879 RB1CC1Q8TDY2 1594 aa11.64□□□□□ -0.55
TSC1-204ENST00000461879 SHROOM4Q9ULL8 1493 aa11.45□□□□□ -0.58
TSC1-204ENST00000461879 SCRIBQ14160 1630 aa11.42□□□□□ -0.58
TSC1-204ENST00000461879 SENP3Q9H4L4 574 aaPredicted RBP11.32□□□□□ -0.6
TSC1-204ENST00000461879 UNC13AQ9UPW8 1703 aa11.25□□□□□ -0.61
TSC1-204ENST00000461879 PABPN1Q86U42 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
TSC1-204ENST00000461879 BICRAQ9NZM4 1560 aa11.2□□□□□ -0.62
TSC1-204ENST00000461879 PLPPR3Q6T4P5 718 aa11.16□□□□□ -0.62
TSC1-204ENST00000461879 BAZ1AQ9NRL2 1556 aaPredicted RBP11.04□□□□□ -0.64
TSC1-204ENST00000461879 CECR2Q9BXF3 1484 aa11.03□□□□□ -0.64
TSC1-204ENST00000461879 SUPT5HO00267 1087 aaKnown RBP11.01□□□□□ -0.65
TSC1-204ENST00000461879 RSF1Q96T23 1441 aaPredicted RBP11□□□□□ -0.65
TSC1-204ENST00000461879 SMARCA4P51532 1647 aa10.96□□□□□ -0.65
TSC1-204ENST00000461879 MROH2BQ7Z745 1585 aa10.96□□□□□ -0.65
TSC1-204ENST00000461879 EIF4G1Q04637 1599 aaKnown RBP10.92□□□□□ -0.66
TSC1-204ENST00000461879 SMARCA2P51531 1590 aa10.88□□□□□ -0.67
TSC1-204ENST00000461879 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
TSC1-204ENST00000461879 ATAD2BQ9ULI0 1458 aa10.85□□□□□ -0.67
TSC1-204ENST00000461879 WIZO95785 1651 aa10.83□□□□□ -0.68
TSC1-204ENST00000461879 NCAPD3P42695 1498 aa10.81□□□□□ -0.68
TSC1-204ENST00000461879 BAZ1BQ9UIG0 1483 aaKnown RBP10.8□□□□□ -0.68
TSC1-204ENST00000461879 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
TSC1-204ENST00000461879 CC2D2AQ9P2K1 1620 aa10.78□□□□□ -0.68
TSC1-204ENST00000461879 HMGXB3Q12766 1538 aa10.77□□□□□ -0.69
TSC1-204ENST00000461879 CCDC88BA6NC98 1476 aa10.67□□□□□ -0.7
TSC1-204ENST00000461879 DNAJC5BQ9UF47 199 aa10.61□□□□□ -0.71
TSC1-204ENST00000461879 CADPSQ9ULU8 1353 aa10.53□□□□□ -0.72
TSC1-204ENST00000461879 ADRA2BP18089 450 aa10.52□□□□□ -0.73
TSC1-204ENST00000461879 CFTRP13569 1480 aa10.52□□□□□ -0.73
TSC1-204ENST00000461879 FOXD1Q16676 465 aa10.51□□□□□ -0.73
TSC1-204ENST00000461879 PPP6R1Q9UPN7 881 aa10.47□□□□□ -0.73
TSC1-204ENST00000461879 LAMC3Q9Y6N6 1575 aa10.46□□□□□ -0.74
TSC1-204ENST00000461879 PDS5BQ9NTI5 1447 aa10.43□□□□□ -0.74
TSC1-204ENST00000461879 TRIM41Q8WV44 630 aa10.43□□□□□ -0.74
TSC1-204ENST00000461879 PRDM2Q13029 1718 aa10.38□□□□□ -0.75
TSC1-204ENST00000461879 FANCD2Q9BXW9 1451 aa10.38□□□□□ -0.75
TSC1-204ENST00000461879 NESP48681 1621 aa10.38□□□□□ -0.75
TSC1-204ENST00000461879 WRNQ14191 1432 aaPredicted RBP eCLIP10.38□□□□□ -0.75
TSC1-204ENST00000461879 CEP164Q9UPV0 1460 aa10.35□□□□□ -0.75
TSC1-204ENST00000461879 ABCC8Q09428 1581 aa10.34□□□□□ -0.75
TSC1-204ENST00000461879 ERCC6Q03468 1493 aa10.3□□□□□ -0.76
TSC1-204ENST00000461879 TOP2BQ02880 1626 aa10.28□□□□□ -0.76
TSC1-204ENST00000461879 CUX1P39880 1505 aa10.27□□□□□ -0.77
TSC1-204ENST00000461879 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
TSC1-204ENST00000461879 MRC2Q9UBG0 1479 aa10.26□□□□□ -0.77
TSC1-204ENST00000461879 DNMBPQ6XZF7 1577 aa10.26□□□□□ -0.77
TSC1-204ENST00000461879 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
TSC1-204ENST00000461879 TOPBP1Q92547 1522 aa10.24□□□□□ -0.77
TSC1-204ENST00000461879 KIF21AQ7Z4S6 1674 aa10.24□□□□□ -0.77
TSC1-204ENST00000461879 EEA1Q15075 1411 aa10.22□□□□□ -0.77
TSC1-204ENST00000461879 URB2Q14146 1524 aaKnown RBP10.22□□□□□ -0.77
TSC1-204ENST00000461879 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
TSC1-204ENST00000461879 WDR62O43379 1518 aa10.18□□□□□ -0.78
TSC1-204ENST00000461879 SOGA1O94964 1423 aa10.18□□□□□ -0.78
TSC1-204ENST00000461879 KCNA4P22459 653 aa10.18□□□□□ -0.78
TSC1-204ENST00000461879 POLA1P09884 1462 aaPredicted RBP10.17□□□□□ -0.78
TSC1-204ENST00000461879 KIF27Q86VH2 1401 aa10.17□□□□□ -0.78
TSC1-204ENST00000461879 FAM9AQ8IZU1 332 aaPredicted RBP10.15□□□□□ -0.78
TSC1-204ENST00000461879 CSRNP3Q8WYN3 585 aa10.15□□□□□ -0.78
TSC1-204ENST00000461879 THOC2Q8NI27 1593 aaKnown RBP10.14□□□□□ -0.79
TSC1-204ENST00000461879 ABCA10Q8WWZ4 1543 aa10.13□□□□□ -0.79
TSC1-204ENST00000461879 IFT140Q96RY7 1462 aa10.13□□□□□ -0.79
TSC1-204ENST00000461879 CUX2O14529 1486 aa10.12□□□□□ -0.79
TSC1-204ENST00000461879 RAD54L2Q9Y4B4 1467 aa10.11□□□□□ -0.79
TSC1-204ENST00000461879 RUSC2Q8N2Y8 1516 aa10.07□□□□□ -0.8
TSC1-204ENST00000461879 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
TSC1-204ENST00000461879 TARBP1Q13395 1621 aaKnown RBP10.07□□□□□ -0.8
TSC1-204ENST00000461879 GAPVD1Q14C86 1478 aa10.06□□□□□ -0.8
TSC1-204ENST00000461879 TDRD9Q8NDG6 1382 aaKnown RBP10.06□□□□□ -0.8
TSC1-204ENST00000461879 IGF1RP08069 1367 aa10.05□□□□□ -0.8
TSC1-204ENST00000461879 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.8
TSC1-204ENST00000461879 CARMIL1Q5VZK9 1371 aa10.02□□□□□ -0.8
TSC1-204ENST00000461879 LOC105371045A0A1W2PR82 267 aa10.02□□□□□ -0.81
TSC1-204ENST00000461879 GRIN2BQ13224 1484 aa10.02□□□□□ -0.81
TSC1-204ENST00000461879 ABCA5Q8WWZ7 1642 aa10.01□□□□□ -0.81
TSC1-204ENST00000461879 AQRO60306 1485 aaKnown RBP eCLIP10.01□□□□□ -0.812e-7■□□□□ 10
TSC1-204ENST00000461879 GOLGA3Q08378 1498 aa10.01□□□□□ -0.81
TSC1-204ENST00000461879 PRXQ9BXM0 1461 aa10.01□□□□□ -0.81
TSC1-204ENST00000461879 KIF21BO75037 1637 aa10□□□□□ -0.81
TSC1-204ENST00000461879 UBTFP17480 764 aaKnown RBP10□□□□□ -0.81
TSC1-204ENST00000461879 ZNF608Q9ULD9 1512 aaPredicted RBP9.99□□□□□ -0.81
TSC1-204ENST00000461879 RAPGEF2Q9Y4G8 1499 aa9.98□□□□□ -0.81
TSC1-204ENST00000461879 PIAS4Q8N2W9 510 aaPredicted RBP9.98□□□□□ -0.81
TSC1-204ENST00000461879 CUL7Q14999 1698 aa9.98□□□□□ -0.81
TSC1-204ENST00000461879 TNIKQ9UKE5 1360 aa9.97□□□□□ -0.81
TSC1-204ENST00000461879 FHAD1B1AJZ9 1412 aa9.97□□□□□ -0.81
TSC1-204ENST00000461879 EHMT2Q96KQ7 1210 aa9.96□□□□□ -0.82
TSC1-204ENST00000461879 MAGI1Q96QZ7 1491 aaPredicted RBP9.96□□□□□ -0.82
TSC1-204ENST00000461879 EIF4G3O43432 1585 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms