RNA–Protein interactions for RNA: ENST00000461595.5

SCUBE1-204, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 3

Gene SCUBE1, Length 530 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-204ENST00000461595 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
SCUBE1-204ENST00000461595 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.19
SCUBE1-204ENST00000461595 ABCC9O60706 1549 aa16.22■□□□□ 0.19
SCUBE1-204ENST00000461595 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
SCUBE1-204ENST00000461595 ZCCHC6Q5VYS8 1495 aaKnown RBP15.45■□□□□ 0.06
SCUBE1-204ENST00000461595 DCAF8L2P0C7V8 631 aa15.33■□□□□ 0.04
SCUBE1-204ENST00000461595 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
SCUBE1-204ENST00000461595 MYO15BQ96JP2 1530 aa15.27■□□□□ 0.03
SCUBE1-204ENST00000461595 NACADO15069 1562 aa15.23■□□□□ 0.03
SCUBE1-204ENST00000461595 RB1CC1Q8TDY2 1594 aa15.15■□□□□ 0.02
SCUBE1-204ENST00000461595 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 0
SCUBE1-204ENST00000461595 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
SCUBE1-204ENST00000461595 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.04
SCUBE1-204ENST00000461595 SHROOM4Q9ULL8 1493 aa14.79□□□□□ -0.04
SCUBE1-204ENST00000461595 UNC13AQ9UPW8 1703 aa14.73□□□□□ -0.05
SCUBE1-204ENST00000461595 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
SCUBE1-204ENST00000461595 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
SCUBE1-204ENST00000461595 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
SCUBE1-204ENST00000461595 EIF4G1Q04637 1599 aaKnown RBP14.36□□□□□ -0.11
SCUBE1-204ENST00000461595 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
SCUBE1-204ENST00000461595 SMARCA4P51532 1647 aa14.24□□□□□ -0.13
SCUBE1-204ENST00000461595 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
SCUBE1-204ENST00000461595 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
SCUBE1-204ENST00000461595 SUPT5HO00267 1087 aaKnown RBP14.13□□□□□ -0.15
SCUBE1-204ENST00000461595 SMARCA2P51531 1590 aa14.11□□□□□ -0.15
SCUBE1-204ENST00000461595 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
SCUBE1-204ENST00000461595 CUX2O14529 1486 aa14.11□□□□□ -0.15
SCUBE1-204ENST00000461595 ATAD2BQ9ULI0 1458 aa14.09□□□□□ -0.15
SCUBE1-204ENST00000461595 WIZO95785 1651 aa14.07□□□□□ -0.16
SCUBE1-204ENST00000461595 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
SCUBE1-204ENST00000461595 TRIM41Q8WV44 630 aa14.04□□□□□ -0.16
SCUBE1-204ENST00000461595 ERCC6Q03468 1493 aa14.01□□□□□ -0.17
SCUBE1-204ENST00000461595 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
SCUBE1-204ENST00000461595 HMGXB3Q12766 1538 aa14□□□□□ -0.17
SCUBE1-204ENST00000461595 TOP2AP11388 1531 aaKnown RBP13.97□□□□□ -0.17
SCUBE1-204ENST00000461595 CCDC88BA6NC98 1476 aa13.81□□□□□ -0.2
SCUBE1-204ENST00000461595 NESP48681 1621 aa13.77□□□□□ -0.21
SCUBE1-204ENST00000461595 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
SCUBE1-204ENST00000461595 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
SCUBE1-204ENST00000461595 CFTRP13569 1480 aa13.64□□□□□ -0.23
SCUBE1-204ENST00000461595 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
SCUBE1-204ENST00000461595 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
SCUBE1-204ENST00000461595 PRDM2Q13029 1718 aa13.52□□□□□ -0.25
SCUBE1-204ENST00000461595 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
SCUBE1-204ENST00000461595 KIF21AQ7Z4S6 1674 aa13.47□□□□□ -0.25
SCUBE1-204ENST00000461595 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
SCUBE1-204ENST00000461595 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
SCUBE1-204ENST00000461595 CHIC1Q5VXU3 224 aa13.4□□□□□ -0.26
SCUBE1-204ENST00000461595 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
SCUBE1-204ENST00000461595 ABCC8Q09428 1581 aa13.38□□□□□ -0.27
SCUBE1-204ENST00000461595 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
SCUBE1-204ENST00000461595 WDR62O43379 1518 aa13.34□□□□□ -0.27
SCUBE1-204ENST00000461595 CUX1P39880 1505 aa13.33□□□□□ -0.28
SCUBE1-204ENST00000461595 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
SCUBE1-204ENST00000461595 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
SCUBE1-204ENST00000461595 URB2Q14146 1524 aaKnown RBP13.31□□□□□ -0.28
SCUBE1-204ENST00000461595 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
SCUBE1-204ENST00000461595 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
SCUBE1-204ENST00000461595 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
SCUBE1-204ENST00000461595 RIMBP3CA6NJZ7 1639 aa13.29□□□□□ -0.28
SCUBE1-204ENST00000461595 RIMBP3BA6NNM3 1639 aa13.29□□□□□ -0.28
SCUBE1-204ENST00000461595 RIMBP3Q9UFD9 1639 aa13.29□□□□□ -0.28
SCUBE1-204ENST00000461595 AEBP2Q6ZN18 517 aaPredicted RBP13.28□□□□□ -0.28
SCUBE1-204ENST00000461595 TRHP20396 242 aaPredicted RBP13.27□□□□□ -0.29
SCUBE1-204ENST00000461595 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
SCUBE1-204ENST00000461595 CYB5RLQ6IPT4 315 aa13.22□□□□□ -0.29
SCUBE1-204ENST00000461595 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
SCUBE1-204ENST00000461595 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.3
SCUBE1-204ENST00000461595 SOGA1O94964 1423 aa13.2□□□□□ -0.3
SCUBE1-204ENST00000461595 IFT140Q96RY7 1462 aa13.16□□□□□ -0.3
SCUBE1-204ENST00000461595 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
SCUBE1-204ENST00000461595 ABCA10Q8WWZ4 1543 aa13.13□□□□□ -0.31
SCUBE1-204ENST00000461595 TARBP1Q13395 1621 aaKnown RBP13.12□□□□□ -0.31
SCUBE1-204ENST00000461595 EEA1Q15075 1411 aa13.11□□□□□ -0.31
SCUBE1-204ENST00000461595 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
SCUBE1-204ENST00000461595 WDR97A6NE52 1622 aa13.08□□□□□ -0.32
SCUBE1-204ENST00000461595 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
SCUBE1-204ENST00000461595 ZNF608Q9ULD9 1512 aaPredicted RBP13.06□□□□□ -0.32
SCUBE1-204ENST00000461595 TDRD9Q8NDG6 1382 aaKnown RBP13.06□□□□□ -0.32
SCUBE1-204ENST00000461595 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
SCUBE1-204ENST00000461595 RUSC2Q8N2Y8 1516 aa13.04□□□□□ -0.32
SCUBE1-204ENST00000461595 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
SCUBE1-204ENST00000461595 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
SCUBE1-204ENST00000461595 AQRO60306 1485 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCUBE1-204ENST00000461595 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.33
SCUBE1-204ENST00000461595 IGF1RP08069 1367 aa13□□□□□ -0.33
SCUBE1-204ENST00000461595 ERICH3Q5RHP9 1530 aa12.99□□□□□ -0.33
SCUBE1-204ENST00000461595 GRIN2BQ13224 1484 aa12.99□□□□□ -0.33
SCUBE1-204ENST00000461595 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
SCUBE1-204ENST00000461595 PBRM1Q86U86 1689 aa12.94□□□□□ -0.34
SCUBE1-204ENST00000461595 FBLN2P98095 1184 aa12.94□□□□□ -0.34
SCUBE1-204ENST00000461595 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
SCUBE1-204ENST00000461595 CUL7Q14999 1698 aa12.93□□□□□ -0.34
SCUBE1-204ENST00000461595 MAGI1Q96QZ7 1491 aaPredicted RBP12.92□□□□□ -0.34
SCUBE1-204ENST00000461595 PRXQ9BXM0 1461 aa12.92□□□□□ -0.34
SCUBE1-204ENST00000461595 FHAD1B1AJZ9 1412 aa12.91□□□□□ -0.34
SCUBE1-204ENST00000461595 KIF21BO75037 1637 aa12.9□□□□□ -0.34
SCUBE1-204ENST00000461595 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.34
SCUBE1-204ENST00000461595 RAPGEF2Q9Y4G8 1499 aa12.9□□□□□ -0.34
SCUBE1-204ENST00000461595 ADAMTS12P58397 1594 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms