RNA–Protein interactions for RNA: ENST00000460090.5

CCDC125-204, Transcript of coiled-coil domain containing 125, humanhuman

TSL 1 (best)

Gene CCDC125, Length 2,273 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC125-204ENST00000460090 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
CCDC125-204ENST00000460090 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
CCDC125-204ENST00000460090 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
CCDC125-204ENST00000460090 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
CCDC125-204ENST00000460090 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
CCDC125-204ENST00000460090 ZCCHC6Q5VYS8 1495 aaKnown RBP21.56■■□□□ 1.04
CCDC125-204ENST00000460090 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
CCDC125-204ENST00000460090 SUPT5HO00267 1087 aaKnown RBP21.14■□□□□ 0.97
CCDC125-204ENST00000460090 DCAF1Q9Y4B6 1507 aa20.94■□□□□ 0.94
CCDC125-204ENST00000460090 MYO15BQ96JP2 1530 aa20.39■□□□□ 0.85
CCDC125-204ENST00000460090 SCRIBQ14160 1630 aa20.39■□□□□ 0.85
CCDC125-204ENST00000460090 ABCC9O60706 1549 aa20.33■□□□□ 0.85
CCDC125-204ENST00000460090 NACADO15069 1562 aa20.17■□□□□ 0.82
CCDC125-204ENST00000460090 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
CCDC125-204ENST00000460090 PHF23Q9BUL5 403 aaPredicted RBP20.11■□□□□ 0.81
CCDC125-204ENST00000460090 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
CCDC125-204ENST00000460090 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
CCDC125-204ENST00000460090 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
CCDC125-204ENST00000460090 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.76
CCDC125-204ENST00000460090 WIZO95785 1651 aa19.73■□□□□ 0.75
CCDC125-204ENST00000460090 TRIM41Q8WV44 630 aa19.71■□□□□ 0.75
CCDC125-204ENST00000460090 PCGF6Q9BYE7 350 aa19.71■□□□□ 0.75
CCDC125-204ENST00000460090 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
CCDC125-204ENST00000460090 HRCP23327 699 aa19.61■□□□□ 0.73
CCDC125-204ENST00000460090 UNC13AQ9UPW8 1703 aa19.6■□□□□ 0.73
CCDC125-204ENST00000460090 FAM9AQ8IZU1 332 aaPredicted RBP19.54■□□□□ 0.72
CCDC125-204ENST00000460090 SMARCA4P51532 1647 aa19.48■□□□□ 0.71
CCDC125-204ENST00000460090 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
CCDC125-204ENST00000460090 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
CCDC125-204ENST00000460090 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
CCDC125-204ENST00000460090 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
CCDC125-204ENST00000460090 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
CCDC125-204ENST00000460090 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
CCDC125-204ENST00000460090 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
CCDC125-204ENST00000460090 SMARCA2P51531 1590 aa19.31■□□□□ 0.68
CCDC125-204ENST00000460090 ABCC8Q09428 1581 aa19.23■□□□□ 0.67
CCDC125-204ENST00000460090 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
CCDC125-204ENST00000460090 PEG3Q9GZU2 1588 aa19.1■□□□□ 0.65
CCDC125-204ENST00000460090 SOGA1O94964 1423 aa19■□□□□ 0.63
CCDC125-204ENST00000460090 ATAD2BQ9ULI0 1458 aa18.99■□□□□ 0.63
CCDC125-204ENST00000460090 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
CCDC125-204ENST00000460090 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
CCDC125-204ENST00000460090 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
CCDC125-204ENST00000460090 EEA1Q15075 1411 aa18.9■□□□□ 0.62
CCDC125-204ENST00000460090 ZEB1P37275 1124 aaPredicted RBP18.89■□□□□ 0.61
CCDC125-204ENST00000460090 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
CCDC125-204ENST00000460090 CEP162Q5TB80 1403 aa18.86■□□□□ 0.61
CCDC125-204ENST00000460090 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
CCDC125-204ENST00000460090 TNIKQ9UKE5 1360 aa18.84■□□□□ 0.61
CCDC125-204ENST00000460090 UBTFP17480 764 aaKnown RBP18.8■□□□□ 0.6
CCDC125-204ENST00000460090 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
CCDC125-204ENST00000460090 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
CCDC125-204ENST00000460090 CEP164Q9UPV0 1460 aa18.69■□□□□ 0.58
CCDC125-204ENST00000460090 KIF21BO75037 1637 aa18.67■□□□□ 0.58
CCDC125-204ENST00000460090 HMGXB3Q12766 1538 aa18.65■□□□□ 0.58
CCDC125-204ENST00000460090 NCAPD3P42695 1498 aa18.64■□□□□ 0.57
CCDC125-204ENST00000460090 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
CCDC125-204ENST00000460090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
CCDC125-204ENST00000460090 CCER1Q8TC90 406 aaPredicted RBP18.58■□□□□ 0.57
CCDC125-204ENST00000460090 BIVM-ERCC5R4GMW8 1640 aa18.58■□□□□ 0.56
CCDC125-204ENST00000460090 RAPGEF2Q9Y4G8 1499 aa18.55■□□□□ 0.56
CCDC125-204ENST00000460090 CLIP1P30622 1438 aa18.55■□□□□ 0.56
CCDC125-204ENST00000460090 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
CCDC125-204ENST00000460090 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.55
CCDC125-204ENST00000460090 CUX1P39880 1505 aa18.47■□□□□ 0.55
CCDC125-204ENST00000460090 RANGAP1P46060 587 aaPredicted RBP18.46■□□□□ 0.55
CCDC125-204ENST00000460090 CFTRP13569 1480 aa18.46■□□□□ 0.55
CCDC125-204ENST00000460090 VPS8Q8N3P4 1428 aa18.45■□□□□ 0.54
CCDC125-204ENST00000460090 ERICH3Q5RHP9 1530 aa18.4■□□□□ 0.54
CCDC125-204ENST00000460090 PRXQ9BXM0 1461 aa18.38■□□□□ 0.53
CCDC125-204ENST00000460090 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
CCDC125-204ENST00000460090 APLP2Q06481 763 aa18.37■□□□□ 0.53
CCDC125-204ENST00000460090 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
CCDC125-204ENST00000460090 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
CCDC125-204ENST00000460090 CADPSQ9ULU8 1353 aa18.27■□□□□ 0.52
CCDC125-204ENST00000460090 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.52
CCDC125-204ENST00000460090 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
CCDC125-204ENST00000460090 CUX2O14529 1486 aa18.21■□□□□ 0.5
CCDC125-204ENST00000460090 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
CCDC125-204ENST00000460090 IGF1RP08069 1367 aa18.14■□□□□ 0.49
CCDC125-204ENST00000460090 ARHGAP35Q9NRY4 1499 aa18.13■□□□□ 0.49
CCDC125-204ENST00000460090 KANK4Q5T7N3 995 aaPredicted RBP18.12■□□□□ 0.49
CCDC125-204ENST00000460090 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
CCDC125-204ENST00000460090 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
CCDC125-204ENST00000460090 CARMIL1Q5VZK9 1371 aa18.07■□□□□ 0.48
CCDC125-204ENST00000460090 ZNF316A6NFI3 1004 aaPredicted RBP18.03■□□□□ 0.48
CCDC125-204ENST00000460090 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
CCDC125-204ENST00000460090 NESP48681 1621 aa18.02■□□□□ 0.48
CCDC125-204ENST00000460090 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
CCDC125-204ENST00000460090 RRBP1Q9P2E9 1410 aaKnown RBP17.99■□□□□ 0.47
CCDC125-204ENST00000460090 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
CCDC125-204ENST00000460090 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.47
CCDC125-204ENST00000460090 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
CCDC125-204ENST00000460090 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
CCDC125-204ENST00000460090 CCNB3Q8WWL7 1395 aa17.93■□□□□ 0.46
CCDC125-204ENST00000460090 TIAM1Q13009 1591 aa17.93■□□□□ 0.46
CCDC125-204ENST00000460090 DHX57Q6P158 1386 aaKnown RBP17.92■□□□□ 0.46
CCDC125-204ENST00000460090 LAMC3Q9Y6N6 1575 aa17.89■□□□□ 0.45
CCDC125-204ENST00000460090 MAP3K1Q13233 1512 aa17.89■□□□□ 0.45
CCDC125-204ENST00000460090 P3H3Q8IVL6 736 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms