RNA–Protein interactions for RNA: ENST00000457482.7

TCF4-204, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-204ENST00000457482 AEBP2Q6ZN18 517 aaPredicted RBP25.2■■□□□ 1.62
TCF4-204ENST00000457482 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
TCF4-204ENST00000457482 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.38
TCF4-204ENST00000457482 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
TCF4-204ENST00000457482 SENP3Q9H4L4 574 aaPredicted RBP21.67■■□□□ 1.06
TCF4-204ENST00000457482 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
TCF4-204ENST00000457482 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
TCF4-204ENST00000457482 SHROOM4Q9ULL8 1493 aa20.96■□□□□ 0.95
TCF4-204ENST00000457482 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
TCF4-204ENST00000457482 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
TCF4-204ENST00000457482 ABCC9O60706 1549 aa20.52■□□□□ 0.88
TCF4-204ENST00000457482 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
TCF4-204ENST00000457482 SUPT5HO00267 1087 aaKnown RBP20.26■□□□□ 0.83
TCF4-204ENST00000457482 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
TCF4-204ENST00000457482 FOXD1Q16676 465 aa20.2■□□□□ 0.82
TCF4-204ENST00000457482 NACADO15069 1562 aa20.18■□□□□ 0.82
TCF4-204ENST00000457482 RB1CC1Q8TDY2 1594 aa19.97■□□□□ 0.79
TCF4-204ENST00000457482 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
TCF4-204ENST00000457482 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
TCF4-204ENST00000457482 CECR2Q9BXF3 1484 aa19.66■□□□□ 0.74
TCF4-204ENST00000457482 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
TCF4-204ENST00000457482 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
TCF4-204ENST00000457482 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
TCF4-204ENST00000457482 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
TCF4-204ENST00000457482 WIZO95785 1651 aa19.41■□□□□ 0.7
TCF4-204ENST00000457482 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
TCF4-204ENST00000457482 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
TCF4-204ENST00000457482 MSH5O43196 834 aa19.16■□□□□ 0.66
TCF4-204ENST00000457482 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
TCF4-204ENST00000457482 SMARCA2P51531 1590 aa18.99■□□□□ 0.63
TCF4-204ENST00000457482 CCDC88BA6NC98 1476 aa18.98■□□□□ 0.63
TCF4-204ENST00000457482 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
TCF4-204ENST00000457482 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
TCF4-204ENST00000457482 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
TCF4-204ENST00000457482 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
TCF4-204ENST00000457482 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
TCF4-204ENST00000457482 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.61
TCF4-204ENST00000457482 PIAS4Q8N2W9 510 aaPredicted RBP18.77■□□□□ 0.6
TCF4-204ENST00000457482 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
TCF4-204ENST00000457482 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
TCF4-204ENST00000457482 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
TCF4-204ENST00000457482 HMGXB3Q12766 1538 aa18.64■□□□□ 0.57
TCF4-204ENST00000457482 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
TCF4-204ENST00000457482 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
TCF4-204ENST00000457482 CC2D2AQ9P2K1 1620 aa18.52■□□□□ 0.56
TCF4-204ENST00000457482 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
TCF4-204ENST00000457482 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
TCF4-204ENST00000457482 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
TCF4-204ENST00000457482 SOGA1O94964 1423 aa18.44■□□□□ 0.54
TCF4-204ENST00000457482 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
TCF4-204ENST00000457482 ADRA2BP18089 450 aa18.39■□□□□ 0.53
TCF4-204ENST00000457482 CFTRP13569 1480 aa18.35■□□□□ 0.53
TCF4-204ENST00000457482 TOP2BQ02880 1626 aa18.28■□□□□ 0.52
TCF4-204ENST00000457482 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
TCF4-204ENST00000457482 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
TCF4-204ENST00000457482 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
TCF4-204ENST00000457482 EEA1Q15075 1411 aa18.24■□□□□ 0.51
TCF4-204ENST00000457482 CADPSQ9ULU8 1353 aa18.24■□□□□ 0.51
TCF4-204ENST00000457482 CUX1P39880 1505 aa18.23■□□□□ 0.51
TCF4-204ENST00000457482 PCGF6Q9BYE7 350 aa18.23■□□□□ 0.51
TCF4-204ENST00000457482 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
TCF4-204ENST00000457482 NESP48681 1621 aa18.13■□□□□ 0.49
TCF4-204ENST00000457482 UBTFP17480 764 aaKnown RBP18.1■□□□□ 0.49
TCF4-204ENST00000457482 GOLGA3Q08378 1498 aa18.1■□□□□ 0.49
TCF4-204ENST00000457482 TNIKQ9UKE5 1360 aa18.09■□□□□ 0.49
TCF4-204ENST00000457482 CEP162Q5TB80 1403 aa18.08■□□□□ 0.48
TCF4-204ENST00000457482 KIF21BO75037 1637 aa18.07■□□□□ 0.48
TCF4-204ENST00000457482 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
TCF4-204ENST00000457482 CEP164Q9UPV0 1460 aa18.06■□□□□ 0.48
TCF4-204ENST00000457482 RAPGEF2Q9Y4G8 1499 aa18.03■□□□□ 0.48
TCF4-204ENST00000457482 TRIM26Q12899 539 aaPredicted RBP18.03■□□□□ 0.48
TCF4-204ENST00000457482 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
TCF4-204ENST00000457482 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
TCF4-204ENST00000457482 LAMC3Q9Y6N6 1575 aa17.97■□□□□ 0.47
TCF4-204ENST00000457482 KIF27Q86VH2 1401 aa17.96■□□□□ 0.47
TCF4-204ENST00000457482 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
TCF4-204ENST00000457482 CUX2O14529 1486 aa17.92■□□□□ 0.46
TCF4-204ENST00000457482 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
TCF4-204ENST00000457482 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
TCF4-204ENST00000457482 RANGAP1P46060 587 aaPredicted RBP17.88■□□□□ 0.45
TCF4-204ENST00000457482 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
TCF4-204ENST00000457482 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
TCF4-204ENST00000457482 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
TCF4-204ENST00000457482 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
TCF4-204ENST00000457482 CLIP1P30622 1438 aa17.86■□□□□ 0.45
TCF4-204ENST00000457482 POLA1P09884 1462 aaPredicted RBP17.85■□□□□ 0.45
TCF4-204ENST00000457482 HRCP23327 699 aa17.83■□□□□ 0.45
TCF4-204ENST00000457482 IGF1RP08069 1367 aa17.83■□□□□ 0.45
TCF4-204ENST00000457482 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.44
TCF4-204ENST00000457482 TTBK1Q5TCY1 1321 aaPredicted RBP17.82■□□□□ 0.44
TCF4-204ENST00000457482 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.44
TCF4-204ENST00000457482 CARMIL1Q5VZK9 1371 aa17.73■□□□□ 0.43
TCF4-204ENST00000457482 VPS8Q8N3P4 1428 aa17.71■□□□□ 0.43
TCF4-204ENST00000457482 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
TCF4-204ENST00000457482 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
TCF4-204ENST00000457482 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
TCF4-204ENST00000457482 ABCA5Q8WWZ7 1642 aa17.62■□□□□ 0.41
TCF4-204ENST00000457482 ARHGAP35Q9NRY4 1499 aa17.62■□□□□ 0.41
TCF4-204ENST00000457482 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
TCF4-204ENST00000457482 MRC2Q9UBG0 1479 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms