RNA–Protein interactions for RNA: ENST00000457206.1

PLEKHM3-204, Transcript of pleckstrin homology domain containing M3, humanhuman

TSL 1 (best) BASIC

Gene PLEKHM3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM3-204ENST00000457206 NISCHQ9Y2I1 1504 aa23.14■■□□□ 1.3
PLEKHM3-204ENST00000457206 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
PLEKHM3-204ENST00000457206 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
PLEKHM3-204ENST00000457206 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
PLEKHM3-204ENST00000457206 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
PLEKHM3-204ENST00000457206 ABCC9O60706 1549 aa19.3■□□□□ 0.68
PLEKHM3-204ENST00000457206 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
PLEKHM3-204ENST00000457206 SCRIBQ14160 1630 aa18.79■□□□□ 0.6
PLEKHM3-204ENST00000457206 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
PLEKHM3-204ENST00000457206 NACADO15069 1562 aa18.48■□□□□ 0.55
PLEKHM3-204ENST00000457206 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
PLEKHM3-204ENST00000457206 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
PLEKHM3-204ENST00000457206 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
PLEKHM3-204ENST00000457206 CECR2Q9BXF3 1484 aa18.29■□□□□ 0.52
PLEKHM3-204ENST00000457206 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
PLEKHM3-204ENST00000457206 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
PLEKHM3-204ENST00000457206 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
PLEKHM3-204ENST00000457206 CHIC1Q5VXU3 224 aa18.04■□□□□ 0.48
PLEKHM3-204ENST00000457206 WIZO95785 1651 aa17.97■□□□□ 0.47
PLEKHM3-204ENST00000457206 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
PLEKHM3-204ENST00000457206 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
PLEKHM3-204ENST00000457206 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
PLEKHM3-204ENST00000457206 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
PLEKHM3-204ENST00000457206 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
PLEKHM3-204ENST00000457206 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
PLEKHM3-204ENST00000457206 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
PLEKHM3-204ENST00000457206 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
PLEKHM3-204ENST00000457206 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
PLEKHM3-204ENST00000457206 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
PLEKHM3-204ENST00000457206 SMARCA2P51531 1590 aa17.46■□□□□ 0.39
PLEKHM3-204ENST00000457206 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
PLEKHM3-204ENST00000457206 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
PLEKHM3-204ENST00000457206 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
PLEKHM3-204ENST00000457206 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
PLEKHM3-204ENST00000457206 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.36
PLEKHM3-204ENST00000457206 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
PLEKHM3-204ENST00000457206 NCAPD3P42695 1498 aa17.16■□□□□ 0.34
PLEKHM3-204ENST00000457206 SOGA1O94964 1423 aa17.15■□□□□ 0.34
PLEKHM3-204ENST00000457206 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
PLEKHM3-204ENST00000457206 PPARGC1BQ86YN6 1023 aaKnown RBP17.14■□□□□ 0.33
PLEKHM3-204ENST00000457206 RANGAP1P46060 587 aaPredicted RBP17.1■□□□□ 0.33
PLEKHM3-204ENST00000457206 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
PLEKHM3-204ENST00000457206 PCGF6Q9BYE7 350 aa17.04■□□□□ 0.32
PLEKHM3-204ENST00000457206 HMGXB3Q12766 1538 aa17.04■□□□□ 0.32
PLEKHM3-204ENST00000457206 TTBK1Q5TCY1 1321 aaPredicted RBP17.04■□□□□ 0.32
PLEKHM3-204ENST00000457206 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
PLEKHM3-204ENST00000457206 NESP48681 1621 aa17■□□□□ 0.31
PLEKHM3-204ENST00000457206 UBTFP17480 764 aaKnown RBP16.98■□□□□ 0.31
PLEKHM3-204ENST00000457206 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
PLEKHM3-204ENST00000457206 CFTRP13569 1480 aa16.89■□□□□ 0.29
PLEKHM3-204ENST00000457206 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
PLEKHM3-204ENST00000457206 CUX1P39880 1505 aa16.84■□□□□ 0.29
PLEKHM3-204ENST00000457206 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
PLEKHM3-204ENST00000457206 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
PLEKHM3-204ENST00000457206 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
PLEKHM3-204ENST00000457206 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
PLEKHM3-204ENST00000457206 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
PLEKHM3-204ENST00000457206 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
PLEKHM3-204ENST00000457206 CUX2O14529 1486 aa16.66■□□□□ 0.26
PLEKHM3-204ENST00000457206 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
PLEKHM3-204ENST00000457206 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
PLEKHM3-204ENST00000457206 EEA1Q15075 1411 aa16.61■□□□□ 0.25
PLEKHM3-204ENST00000457206 TRIM26Q12899 539 aaPredicted RBP16.6■□□□□ 0.25
PLEKHM3-204ENST00000457206 TNIKQ9UKE5 1360 aa16.59■□□□□ 0.25
PLEKHM3-204ENST00000457206 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
PLEKHM3-204ENST00000457206 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
PLEKHM3-204ENST00000457206 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
PLEKHM3-204ENST00000457206 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
PLEKHM3-204ENST00000457206 P3H3Q8IVL6 736 aa16.56■□□□□ 0.24
PLEKHM3-204ENST00000457206 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
PLEKHM3-204ENST00000457206 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
PLEKHM3-204ENST00000457206 KIF21AQ7Z4S6 1674 aa16.55■□□□□ 0.24
PLEKHM3-204ENST00000457206 POLA1P09884 1462 aaPredicted RBP16.53■□□□□ 0.24
PLEKHM3-204ENST00000457206 CLIP1P30622 1438 aa16.51■□□□□ 0.23
PLEKHM3-204ENST00000457206 IGF1RP08069 1367 aa16.51■□□□□ 0.23
PLEKHM3-204ENST00000457206 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
PLEKHM3-204ENST00000457206 LAMC3Q9Y6N6 1575 aa16.5■□□□□ 0.23
PLEKHM3-204ENST00000457206 KIF21BO75037 1637 aa16.46■□□□□ 0.23
PLEKHM3-204ENST00000457206 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.22
PLEKHM3-204ENST00000457206 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
PLEKHM3-204ENST00000457206 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
PLEKHM3-204ENST00000457206 ATP1B4Q9UN42 357 aaPredicted RBP16.45■□□□□ 0.22
PLEKHM3-204ENST00000457206 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
PLEKHM3-204ENST00000457206 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.21
PLEKHM3-204ENST00000457206 HRCP23327 699 aa16.37■□□□□ 0.21
PLEKHM3-204ENST00000457206 APLP2Q06481 763 aa16.35■□□□□ 0.21
PLEKHM3-204ENST00000457206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
PLEKHM3-204ENST00000457206 FBLN2P98095 1184 aa16.33■□□□□ 0.2
PLEKHM3-204ENST00000457206 ABCA10Q8WWZ4 1543 aa16.32■□□□□ 0.2
PLEKHM3-204ENST00000457206 ARAP1Q96P48 1450 aa16.32■□□□□ 0.2
PLEKHM3-204ENST00000457206 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
PLEKHM3-204ENST00000457206 ZNF608Q9ULD9 1512 aaPredicted RBP16.32■□□□□ 0.2
PLEKHM3-204ENST00000457206 KANK4Q5T7N3 995 aaPredicted RBP16.32■□□□□ 0.2
PLEKHM3-204ENST00000457206 ARID3CA6NKF2 412 aa16.3■□□□□ 0.2
PLEKHM3-204ENST00000457206 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
PLEKHM3-204ENST00000457206 ERICH3Q5RHP9 1530 aa16.28■□□□□ 0.2
PLEKHM3-204ENST00000457206 MRC2Q9UBG0 1479 aa16.28■□□□□ 0.2
PLEKHM3-204ENST00000457206 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
PLEKHM3-204ENST00000457206 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
PLEKHM3-204ENST00000457206 ITGAEP38570 1179 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms