RNA–Protein interactions for RNA: ENST00000456993.5

ERCC6L2-205, Transcript of ERCC excision repair 6 like 2, humanhuman

TSL 1 (best)

Gene ERCC6L2, Length 1,822 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6L2-205ENST00000456993 AEBP2Q6ZN18 517 aaPredicted RBP18.63■□□□□ 0.57
ERCC6L2-205ENST00000456993 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
ERCC6L2-205ENST00000456993 SENP3Q9H4L4 574 aaPredicted RBP16.08■□□□□ 0.16
ERCC6L2-205ENST00000456993 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
ERCC6L2-205ENST00000456993 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
ERCC6L2-205ENST00000456993 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
ERCC6L2-205ENST00000456993 FOXD1Q16676 465 aa15.06■□□□□ 0
ERCC6L2-205ENST00000456993 MSH5O43196 834 aa14.48□□□□□ -0.09
ERCC6L2-205ENST00000456993 PIAS4Q8N2W9 510 aaPredicted RBP13.84□□□□□ -0.19
ERCC6L2-205ENST00000456993 CCDC180Q9P1Z9 1646 aa13.58□□□□□ -0.24
ERCC6L2-205ENST00000456993 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
ERCC6L2-205ENST00000456993 ADRA2BP18089 450 aa13.25□□□□□ -0.29
ERCC6L2-205ENST00000456993 ABCC9O60706 1549 aa13.21□□□□□ -0.3
ERCC6L2-205ENST00000456993 PLPPR3Q6T4P5 718 aa13.04□□□□□ -0.32
ERCC6L2-205ENST00000456993 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
ERCC6L2-205ENST00000456993 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
ERCC6L2-205ENST00000456993 NACADO15069 1562 aa12.73□□□□□ -0.37
ERCC6L2-205ENST00000456993 ZCCHC6Q5VYS8 1495 aaKnown RBP12.68□□□□□ -0.38
ERCC6L2-205ENST00000456993 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
ERCC6L2-205ENST00000456993 DCAF1Q9Y4B6 1507 aa12.61□□□□□ -0.39
ERCC6L2-205ENST00000456993 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
ERCC6L2-205ENST00000456993 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
ERCC6L2-205ENST00000456993 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
ERCC6L2-205ENST00000456993 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
ERCC6L2-205ENST00000456993 BICRAQ9NZM4 1560 aa12.4□□□□□ -0.42
ERCC6L2-205ENST00000456993 SCRIBQ14160 1630 aa12.33□□□□□ -0.44
ERCC6L2-205ENST00000456993 PABPN1Q86U42 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
ERCC6L2-205ENST00000456993 POTEHQ6S545 545 aa12.28□□□□□ -0.44
ERCC6L2-205ENST00000456993 RNF39Q9H2S5 420 aa12.26□□□□□ -0.45
ERCC6L2-205ENST00000456993 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
ERCC6L2-205ENST00000456993 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
ERCC6L2-205ENST00000456993 DNAJC5BQ9UF47 199 aa12.14□□□□□ -0.47
ERCC6L2-205ENST00000456993 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
ERCC6L2-205ENST00000456993 C1QBPQ07021 282 aaKnown RBP12.04□□□□□ -0.48
ERCC6L2-205ENST00000456993 EIF4G1Q04637 1599 aaKnown RBP12.04□□□□□ -0.48
ERCC6L2-205ENST00000456993 CC2D2AQ9P2K1 1620 aa11.99□□□□□ -0.49
ERCC6L2-205ENST00000456993 CECR2Q9BXF3 1484 aa11.87□□□□□ -0.51
ERCC6L2-205ENST00000456993 SMARCA4P51532 1647 aa11.82□□□□□ -0.52
ERCC6L2-205ENST00000456993 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
ERCC6L2-205ENST00000456993 BAZ1AQ9NRL2 1556 aaPredicted RBP11.78□□□□□ -0.52
ERCC6L2-205ENST00000456993 ATAD2BQ9ULI0 1458 aa11.73□□□□□ -0.53
ERCC6L2-205ENST00000456993 PEG3Q9GZU2 1588 aa11.73□□□□□ -0.53
ERCC6L2-205ENST00000456993 NCAPD3P42695 1498 aa11.73□□□□□ -0.53
ERCC6L2-205ENST00000456993 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
ERCC6L2-205ENST00000456993 MROH2BQ7Z745 1585 aa11.72□□□□□ -0.53
ERCC6L2-205ENST00000456993 HMGXB3Q12766 1538 aa11.69□□□□□ -0.54
ERCC6L2-205ENST00000456993 BAZ1BQ9UIG0 1483 aaKnown RBP11.61□□□□□ -0.55
ERCC6L2-205ENST00000456993 WIZO95785 1651 aa11.61□□□□□ -0.55
ERCC6L2-205ENST00000456993 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
ERCC6L2-205ENST00000456993 TOP2AP11388 1531 aaKnown RBP11.47□□□□□ -0.57
ERCC6L2-205ENST00000456993 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
ERCC6L2-205ENST00000456993 NESP48681 1621 aa11.45□□□□□ -0.58
ERCC6L2-205ENST00000456993 LAMC3Q9Y6N6 1575 aa11.44□□□□□ -0.58
ERCC6L2-205ENST00000456993 KIF21AQ7Z4S6 1674 aa11.36□□□□□ -0.59
ERCC6L2-205ENST00000456993 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
ERCC6L2-205ENST00000456993 ERCC6Q03468 1493 aa11.35□□□□□ -0.59
ERCC6L2-205ENST00000456993 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
ERCC6L2-205ENST00000456993 PRDM2Q13029 1718 aa11.32□□□□□ -0.6
ERCC6L2-205ENST00000456993 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
ERCC6L2-205ENST00000456993 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
ERCC6L2-205ENST00000456993 CFTRP13569 1480 aa11.32□□□□□ -0.6
ERCC6L2-205ENST00000456993 PDS5BQ9NTI5 1447 aa11.31□□□□□ -0.6
ERCC6L2-205ENST00000456993 PPP4R3CPQ6ZMV5 832 aa11.3□□□□□ -0.6
ERCC6L2-205ENST00000456993 CUX2O14529 1486 aa11.29□□□□□ -0.6
ERCC6L2-205ENST00000456993 FANCD2Q9BXW9 1451 aa11.24□□□□□ -0.61
ERCC6L2-205ENST00000456993 WDR62O43379 1518 aa11.22□□□□□ -0.61
ERCC6L2-205ENST00000456993 MRC2Q9UBG0 1479 aa11.22□□□□□ -0.61
ERCC6L2-205ENST00000456993 CEP164Q9UPV0 1460 aa11.22□□□□□ -0.61
ERCC6L2-205ENST00000456993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.19□□□□□ -0.624e-6■■■■□ 19.8
ERCC6L2-205ENST00000456993 DSG3P32926 999 aa11.16□□□□□ -0.62
ERCC6L2-205ENST00000456993 SUPT5HO00267 1087 aaKnown RBP11.16□□□□□ -0.62
ERCC6L2-205ENST00000456993 URB2Q14146 1524 aaKnown RBP11.15□□□□□ -0.62
ERCC6L2-205ENST00000456993 TOPBP1Q92547 1522 aa11.07□□□□□ -0.64
ERCC6L2-205ENST00000456993 DNMBPQ6XZF7 1577 aa11.07□□□□□ -0.64
ERCC6L2-205ENST00000456993 ABCC8Q09428 1581 aa11.06□□□□□ -0.64
ERCC6L2-205ENST00000456993 CUX1P39880 1505 aa11□□□□□ -0.65
ERCC6L2-205ENST00000456993 TARBP1Q13395 1621 aaKnown RBP11□□□□□ -0.65
ERCC6L2-205ENST00000456993 IFT140Q96RY7 1462 aa10.99□□□□□ -0.65
ERCC6L2-205ENST00000456993 CAPN15O75808 1086 aa10.98□□□□□ -0.65
ERCC6L2-205ENST00000456993 POLA1P09884 1462 aaPredicted RBP10.97□□□□□ -0.65
ERCC6L2-205ENST00000456993 SPINK5Q9NQ38 1064 aaPredicted RBP10.95□□□□□ -0.66
ERCC6L2-205ENST00000456993 ZNF608Q9ULD9 1512 aaPredicted RBP10.95□□□□□ -0.66
ERCC6L2-205ENST00000456993 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
ERCC6L2-205ENST00000456993 FGD5Q6ZNL6 1462 aa10.94□□□□□ -0.66
ERCC6L2-205ENST00000456993 WDR97A6NE52 1622 aa10.94□□□□□ -0.66
ERCC6L2-205ENST00000456993 BIVM-ERCC5R4GMW8 1640 aa10.94□□□□□ -0.66
ERCC6L2-205ENST00000456993 DNAJC5Q9H3Z4 198 aa10.93□□□□□ -0.66
ERCC6L2-205ENST00000456993 SP7Q8TDD2 431 aaPredicted RBP10.91□□□□□ -0.66
ERCC6L2-205ENST00000456993 PLSCR2Q9NRY7 297 aa10.91□□□□□ -0.66
ERCC6L2-205ENST00000456993 RAD54L2Q9Y4B4 1467 aa10.91□□□□□ -0.66
ERCC6L2-205ENST00000456993 TOP2BQ02880 1626 aa10.91□□□□□ -0.66
ERCC6L2-205ENST00000456993 SYNJ1O43426 1573 aa10.9□□□□□ -0.66
ERCC6L2-205ENST00000456993 SOGA1O94964 1423 aa10.9□□□□□ -0.67
ERCC6L2-205ENST00000456993 WRNQ14191 1432 aaPredicted RBP eCLIP10.88□□□□□ -0.67
ERCC6L2-205ENST00000456993 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
ERCC6L2-205ENST00000456993 AQRO60306 1485 aaKnown RBP eCLIP10.86□□□□□ -0.67
ERCC6L2-205ENST00000456993 ABCA10Q8WWZ4 1543 aa10.85□□□□□ -0.67
ERCC6L2-205ENST00000456993 ABCA5Q8WWZ7 1642 aa10.84□□□□□ -0.67
ERCC6L2-205ENST00000456993 PBRM1Q86U86 1689 aa10.84□□□□□ -0.67
ERCC6L2-205ENST00000456993 TDRD9Q8NDG6 1382 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms